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(-) Description

Title :  CRYSTAL STRUCTURE OF T. FUSCA CAS3-AMPPNP
 
Authors :  A. Ke, Y. Huo, K. H. Nam
Date :  30 Jun 14  (Deposition) - 27 Aug 14  (Release) - 24 Sep 14  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.93
Chains :  Asym. Unit :  A,B,C,D,E,F,G,H
Biol. Unit 1:  A,B  (1x)
Biol. Unit 2:  C,D  (1x)
Biol. Unit 3:  E,F  (1x)
Biol. Unit 4:  G,H  (1x)
Biol. Unit 5:  A,B,C,D  (1x)
Biol. Unit 6:  E,F,G,H  (1x)
Keywords :  Hydrolase, Helicase, Hydrolase-Dna Complex (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  Y. Huo, K. H. Nam, F. Ding, H. Lee, L. Wu, Y. Xiao, M. D. Farchione, S. Zhou K. Rajashankar, I. Kurinov, R. Zhang, A. Ke
Structures Of Crispr Cas3 Offer Mechanistic Insights Into Cascade-Activated Dna Unwinding And Degradation.
Nat. Struct. Mol. Biol. V. 21 771 2014
PubMed-ID: 25132177  |  Reference-DOI: 10.1038/NSMB.2875

(-) Compounds

Molecule 1 - CRISPR-ASSOCIATED HELICASE, CAS3 FAMILY
    Chains: A, C, E, G
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PET28B
    Expression System Strain: BL21(DE3)STAR
    Expression System Taxid: 469008
    Expression System Vector Type: PLASMID
    Gene: TFU_1593
    Organism Scientific: THERMOBIFIDA FUSCA
    Organism Taxid: 269800
    Strain: YX
 
Molecule 2 - DNA (5'-D(P*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*A)-3')
    Chains: B, D, F, H
    Engineered: YES
    Synthetic: YES

 Structural Features

(-) Chains, Units

  12345678
Asymmetric Unit : ABCDEFGH
Biological Unit 1 (1x): AB      
Biological Unit 2 (1x):   CD    
Biological Unit 3 (1x):     EF  
Biological Unit 4 (1x):       GH
Biological Unit 5 (1x): ABCD    
Biological Unit 6 (1x):     EFGH

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 12)

Asymmetric Unit (2, 12)
No.NameCountTypeFull Name
1ANP4Ligand/IonPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
2FE8Ligand/IonFE (III) ION
Biological Unit 1 (1, 1)
No.NameCountTypeFull Name
1ANP1Ligand/IonPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
2FE-1Ligand/IonFE (III) ION
Biological Unit 2 (1, 1)
No.NameCountTypeFull Name
1ANP1Ligand/IonPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
2FE-1Ligand/IonFE (III) ION
Biological Unit 3 (1, 1)
No.NameCountTypeFull Name
1ANP1Ligand/IonPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
2FE-1Ligand/IonFE (III) ION
Biological Unit 4 (1, 1)
No.NameCountTypeFull Name
1ANP1Ligand/IonPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
2FE-1Ligand/IonFE (III) ION
Biological Unit 5 (1, 2)
No.NameCountTypeFull Name
1ANP2Ligand/IonPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
2FE-1Ligand/IonFE (III) ION
Biological Unit 6 (1, 2)
No.NameCountTypeFull Name
1ANP2Ligand/IonPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
2FE-1Ligand/IonFE (III) ION

(-) Sites  (12, 12)

Asymmetric Unit (12, 12)
No.NameEvidenceResiduesDescription
01AC1SOFTWAREASP A:84 , HIS A:115 , HIS A:149 , HIS A:150 , FE A:1002 , DA B:12BINDING SITE FOR RESIDUE FE A 1001
02AC2SOFTWAREHIS A:37 , HIS A:83 , ASP A:84 , ASP A:215 , FE A:1001 , DA B:12BINDING SITE FOR RESIDUE FE A 1002
03AC3SOFTWARELEU A:277 , LYS A:279 , GLN A:284 , GLY A:308 , GLU A:309 , GLY A:310 , THR A:312 , GLU A:313 , ARG A:692BINDING SITE FOR RESIDUE ANP A 1003
04AC4SOFTWAREASP C:84 , HIS C:115 , HIS C:149 , HIS C:150 , FE C:1002 , DA D:12BINDING SITE FOR RESIDUE FE C 1001
05AC5SOFTWAREHIS C:37 , HIS C:83 , ASP C:84 , ASP C:215 , FE C:1001 , DA D:12BINDING SITE FOR RESIDUE FE C 1002
06AC6SOFTWARELEU C:277 , LYS C:279 , ASN C:281 , GLN C:284 , MET C:307 , GLY C:308 , GLU C:309 , GLY C:310 , GLU C:313 , ARG C:692BINDING SITE FOR RESIDUE ANP C 1003
07AC7SOFTWAREASP E:84 , HIS E:115 , HIS E:149 , HIS E:150 , FE E:1002 , DA F:12BINDING SITE FOR RESIDUE FE E 1001
08AC8SOFTWAREHIS E:37 , HIS E:83 , ASP E:84 , ASP E:215 , FE E:1001 , DA F:12BINDING SITE FOR RESIDUE FE E 1002
09AC9SOFTWARELEU E:277 , LYS E:279 , ASN E:281 , GLN E:284 , MET E:307 , GLY E:308 , GLY E:310 , LYS E:311 , THR E:312 , GLU E:313BINDING SITE FOR RESIDUE ANP E 1003
10BC1SOFTWAREASP G:84 , HIS G:115 , HIS G:149 , HIS G:150 , FE G:1002 , DA H:12BINDING SITE FOR RESIDUE FE G 1001
11BC2SOFTWAREHIS G:37 , HIS G:83 , ASP G:84 , ASP G:215 , FE G:1001 , DA H:12BINDING SITE FOR RESIDUE FE G 1002
12BC3SOFTWARELEU G:277 , LYS G:279 , ASN G:281 , MET G:307 , GLY G:308 , GLU G:309 , GLY G:310 , LYS G:311 , GLU G:313 , ARG G:692BINDING SITE FOR RESIDUE ANP G 1003

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4QQZ)

(-) Cis Peptide Bonds  (18, 18)

Asymmetric Unit
No.Residues
1Tyr A:519 -Pro A:520
2Ala A:613 -Pro A:614
3Ile A:757 -Pro A:758
4Ala A:844 -Gly A:845
5Arg C:363 -Ser C:364
6Tyr C:519 -Pro C:520
7Leu C:609 -Gly C:610
8Glu C:611 -Asp C:612
9Ile C:757 -Pro C:758
10Ala C:844 -Gly C:845
11Tyr E:519 -Pro E:520
12Ala E:613 -Pro E:614
13Ile E:757 -Pro E:758
14Ala E:844 -Gly E:845
15Tyr G:519 -Pro G:520
16Ala G:613 -Pro G:614
17Ile G:757 -Pro G:758
18Ala G:923 -Val G:924

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4QQZ)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4QQZ)

(-) Exons   (0, 0)

(no "Exon" information available for 4QQZ)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:903
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .......eee........eehhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhh...................hhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhh..............hhhhhh...hhhhhhhhhhhhhhhhhhh.........hhhhhhhhhhhhhhhhhhh.hhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhhhh..........hhhhhh......hhhhhhhhhhh.......eeeeee.....hhhhhhhhhhhhhhhhh...eeeeee.hhhhhhhhhhhhhhhhhhhh......eeee..............................hhhhh.eeeeehhhhhhhhh...hhhhhhhhhhheeeee.hhhhhhhhhhhhhhhhhhhhhhh...eeeee...hhhhhhhhhhhhhhhhhh.................eeeeee.....eeehhhhh............eeeeeee.ee..ee.hhhhhhhhhhhhhhhh..eeee..hhhhhhhhhhhhhhhh......eeee....hhhhhhhhhhhhhhhhhhhhhh.......eeee.hhhhh.......eeeee..hhhhhhhhhhhh..hhhhh...........eeeeeee........hhhhhh..hhhhhhhhhhhhhh..........hhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhh..hhhhhh..hhhhh..............eeeeeeeee.....ee..............hhhhh.hhhhhhhhhh..eeee.hhhhhhhhhhhh.hhhhhhhhhhhh.eeeeee.........eee..eeeeee...eee. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4qqz A  14 PPLDLRFWAKERGLRGKTYPLVCHSLDAAAAALVLWNEYLSPGLRDTIASSMETDEEHAGHCIAFWAGLHDIGKLTREFQQQIAIDLSAYPGEELSGEQRSHAAATGKWLPFALPSLGYPNGGLVTGLVAQMLGGHHGTFHPHPSFQSRNPLAEFGFSSPHWEKQRHALLHAVFDATGRPTPPDMLDGPTASVVCGLVILADWLVSQEDFLLERLTSLPADGSASALRAHFETSLRRIPSLLDAAGLRPITVPPATFTESFPHLSKPNGLQASLAKHLPCLCTGPGLVLITAPMGEGKTEAAYHVADLLGKATGRPGRFLALPTMATADQMHTRLKEYARYRVEPRSSTLALLHSMAWLNPDYAPALGHRDPFAATDWLMGRKRGLLAPWAVGTIDQALMAVLRAKHNALRLFGLAGKVVVVDEAHAVDPYMQVLLEQLLRWLGTLDVPVVLLSATLHHSIANSLVKAYLEGARGRRWNRSEPQPVSEVSYPGWLHVDARIGKVTRSSDVDPLPIATTPRKPLEVRLVDVPVKEGALNRSTVLAKELTPLVKQGGCAAIICTTVAEAQGVYDLLSQWFATLAPDLYLLHSRFPNRQRTEITATIVDLFGKEGAQSGRRPTAVLVATQVVEQSLDLDVDLMISDLAPVSLLLQRAGRCWRHEHLGIINRPQWAKQPELVVLTPEQNRAPWFPRSWTSVYPLALLQRTYTLLRRRNGAPVQIPEDVQQLVDDVYDDDSLAEDLEADMERMGEELAQRGLARNAVIPDPDDAEDNLNGLTEFSFHVLATRFGAGSVRVLCYYVDTAGNRWLDPECTVEFPEQGTGREGRFTMADCRDLVARTIPVRMGPWASQLTEDNHPPEAWRESFYLRDLVLIPQRVTDEGAVLPTETGGREWLLDPCKGLIF 944
                                    23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273       283       293       303       313       323       333       343       353   ||  367       377     ||398       408       418       428       438       448       458       468       478       488       498       508       518       528       538       548       558       568       578       588       598       608||     621       631       641       651|      663       673       683       693       703       713    || 727       737       747       757       767       777       787       797       807       817||     831       841       851       861       871       881       891       901       911       921       931       941   
                                                                                                                                                                                                                                                                                                                                                                                 357|                  383|                                                                                                                                                                                                                   609|                                   651|                                                             718|                                                                                            818|                                                                                                                         
                                                                                                                                                                                                                                                                                                                                                                                  362                   395                                                                                                                                                                                                                    613                                    654                                                              723                                                                                             823                                                                                                                         


Chain B from PDB  Type:DNA  Length:11
                                           
                 4qqz B   1 AAAAAAAAAAA  12
                                  ||11 
                                  7|   
                                   9   


Chain C from PDB  Type:PROTEIN  Length:902
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .......eee........eehhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhh...................hhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhh..............hhhhhh...hhhhhhhhhhhhhhhhhhh.........hhhhhhhhhhhhhhhhhhh.hhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhhhh..........hhhhhh......hhhhhhhhhhhhhhh...eeeeee.....hhhhhhhhhhhhhhhhh...eeeeee.hhhhhhhhhhhhhhhhhhhh.......eeee..hhhhh...........hhhhhh..hhhhh.eeeeehhhhhh......hhhhhhhhhhheeeee.hhhhhhhhhhhhhhhhhhhhhhh...eeeee...hhhhhhhhhhhhhhhhhh.................eeeeee.....eeehhhhh............eeeeeee.ee..ee.hhhhhhhhhhhhhhhh.eeeee..hhhhhhhhhhhhhhhhhh......eeeee....hhhhhhhhhhhhhhhhhhhhhhh.......eeeee.hhhhh.......eeeee..hhhhhhhhhhhh..hhhhh...........eeeeeee.......hhhhhh..hhhhhhhhhhhhhhh.........hhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhh...hhhhh..hhhhh............eeeeeeeee.....ee..............hhhhh.hhhhhhhhhh..eeee.hhhhhhhhhhhh.hhhhhhh......eeeeee.........eee..eeeeee...eee. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4qqz C  14 PPLDLRFWAKERGLRGKTYPLVCHSLDAAAAALVLWNEYLSPGLRDTIASSMETDEEHAGHCIAFWAGLHDIGKLTREFQQQIAIDLSAYPGEELSGEQRSHAAATGKWLPFALPSLGYPNGGLVTGLVAQMLGGHHGTFHPHPSFQSRNPLAEFGFSSPHWEKQRHALLHAVFDATGRPTPPDMLDGPTASVVCGLVILADWLVSQEDFLLERLTSLPADGSASALRAHFETSLRRIPSLLDAAGLRPITVPPATFTESFPHLSKPNGLQASLAKHLPCLCTGPGLVLITAPMGEGKTEAAYHVADLLGKATGRPGRFLALPTMATADQMHTRLKEYARYRVENTRSSTLALLHSMAWLNPDYAPADPFAATDWLMGRKRGLLAPWAVGTIDQALMAVLRAKHNALRLFGLAGKVVVVDEAHAVDPYMQVLLEQLLRWLGTLDVPVVLLSATLHHSIANSLVKAYLEGARGRRWNRSEPQPVSEVSYPGWLHVDARIGKVTRSSDVDPLPIATTPRKPLEVRLVDVPVKEGALNRSTVLAKELTPLVKQGGCAAIICTTVAEAQGVYDLLSQWFATLGEDAPDLYLLHSRFPNRQRTEITATIVDLFGKEGAQSGRRPTRGAVLVATQVVEQSLDLDVDLMISDLAPVSLLLQRAGRCWRHEHLGIINRPQWAKQPELVVLTPEQNAPWFPRSWTSVYPLALLQRTYTLLRRRNGAPVQIPEDVQQLVDDVYDDDSLAEDLEADMERMGEELAQRGLARNAVIPDPDDAEDNLNGLTEFSVLATRFGAGSVRVLCYYVDTAGNRWLDPECTVEFPEQGTGREGRFTMADCRDLVARTIPVRMGPWASQLTEDNHPPEAWRESFYLRDLVLIPQRVTDEGAVLPTETGGREWLLDPCKGLIF 944
                                    23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273       283       293       303       313       323       333       343       353     ||366       376      |401       411       421       431       441       451       461       471       481       491       501       511       521       531       541       551       561       571       581       591       601       611       621       631       641       651       661       671       681       691       701       711      |726       736       746       756       766       776       786       796       806       816||     832       842       852       862       872       882       892       902       912       922       932       942  
                                                                                                                                                                                                                                                                                                                                                                                   359|                 383|                                                                                                                                                                                                                                                                                                                            718|                                                                                          817|                                                                                                                        
                                                                                                                                                                                                                                                                                                                                                                                    363                  399                                                                                                                                                                                                                                                                                                                             724                                                                                           824                                                                                                                        


Chain D from PDB  Type:DNA  Length:11
                                           
                 4qqz D   1 AAAAAAAAAAA  12
                                  ||11 
                                  7|   
                                   9   


Chain E from PDB  Type:PROTEIN  Length:899
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .......eee........eehhhhhhhhhhhhhhhhhhh.hhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhh...................hhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhh..............hhhhhh...hhhhhhhhhhhhhhhhhhh.........hhhhhhhhhhhhhhhhhhh.hhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhh.........hhhhhh......hhhhhhhhhhhhhhh...eeeeee.....hhhhhhhhhhhhhhhhh...eeeeee.hhhhhhhhhhhhhhhhhh.........eeee..hhhhh............hhhhh..hhhhh.eeeeehhhhhhhhh...hhhhhhhhhhheeeee.hhhhhhhhhhhhhhhhhhhhhhh...eeeee...hhhhhhhhhhhhhhhhhh...................eeee.....eee.hhhh............eeeeeee........hhhhhhhhhhhhhhhh.eeeee..hhhhhhhhhhhhhhhhh....eeeee....hhhhhhhhhhhhhhhhhhhhhh........eeeee.hhhh........eeeee..hhhhhhhhhh....................eeeeeee................hhhhhhhhhhhhhhh.........hhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhh..hhhhhh..hhhhh...........eeeeeeeee.....ee....................hhhhhhhhhh..eeee.hhhhh........hhhhhhh......eeeeeee.....ee.eee..eeeeee...eee. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4qqz E  14 PPLDLRFWAKERGLRGKTYPLVCHSLDAAAAALVLWNEYLSPGLRDTIASSMETDEEHAGHCIAFWAGLHDIGKLTREFQQQIAIDLSAYPGEELSGEQRSHAAATGKWLPFALPSLGYPNGGLVTGLVAQMLGGHHGTFHPHPSFQSRNPLAEFGFSSPHWEKQRHALLHAVFDATGRPTPPDMLDGPTASVVCGLVILADWLVSQEDFLLERLTSLPADGSASALRAHFETSLRRIPSLLDAAGLRPITVPPATFTESFPHLSKPNGLQASLAKHLPCLCTGPGLVLITAPMGEGKTEAAYHVADLLGKATGRPGRFLALPTMATADQMHTRLKEYARYRVENPRSSTLALLHSMAWLNPDYAPADPFAATDWLMGRKRGLLAPWAVGTIDQALMAVLRAKHNALRLFGLAGKVVVVDEAHAVDPYMQVLLEQLLRWLGTLDVPVVLLSATLHHSIANSLVKAYLEGARGRRWNRSEPQPVSEVSYPGWLHVDARIGKVTRSSDVDPLPIATTPRKPLEVRLVDVPVKEGALNRSTVLAKELTPLVKQGGCAAIICTTVAEAQGVYDLLSQWFATLAPDLYLLHSRFPNRQRTEITATIVDLFGKEGAQSGRRPTRGAVLVATQVVEQSLDLDVDLMISDLAPVSLLLQRAGRCWRHEHLGIINRPQWAKQPELVVLTPEQNRAPWFPRSWTSVYPLALLQRTYTLLRRRNGAPVQIPEDVQQLVDDVYDDDSLAEDLEADMERMGEELAQRGLARNAVIPDPDDAEDNLNGLTEFVLATRFGAGSVRVLCYYVDTAGNRWLDPECTVEFPEQGTGREGRFTMADCRDLVARTIPVRMGPWASQLTEDNHPPEAWRESFYLRDLVLIPQRVTDEGAVLPTETGGREWLLDPCKGLIF 944
                                    23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273       283       293       303       313       323       333       343       353    || 366       376      |401       411       421       431       441       451       461       471       481       491       501       511       521       531       541       551       561       571       581       591       601       614       624       634       644       654       664       674       684       694       704       714   ||  728       738       748       758       768       778       788       798       808       825       835       845       855       865       875       885       895       905       915       925       935         
                                                                                                                                                                                                                                                                                                                                                                                  358|                  383|                                                                                                                                                                                                               609|                                                                                                      718|                                                                                          816|                                                                                                                        
                                                                                                                                                                                                                                                                                                                                                                                   362                   399                                                                                                                                                                                                                613                                                                                                       723                                                                                           824                                                                                                                        


Chain F from PDB  Type:DNA  Length:11
                                           
                 4qqz F   1 AAAAAAAAAAA  12
                                  ||11 
                                  7|   
                                   9   


Chain G from PDB  Type:PROTEIN  Length:892
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .......eee........eehhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhh...................hhhhhhhhhhhhhhhhhh....hhhhhhhhhhhh...............hhhhhh...hhhhhhhhhhhhhhhhhhh.........hhhhhhhhhhhhhhhhhhh.hhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhhhh..........hhhhhh......hhhhhhhhhhhhhhh...eeeeee.....hhhhhhhhhhhhhhhh....eeeeee.hhhhhhhhhhhhhhhhhhhh.....eeee..hhhhh............hhhhh..hhhhh.eeeeehhhhhhhhh...hhhhhhhhhh.eeeee.hhhhhhhhhhhhhhhhhhhhhhh...eeeee...hhhhhhhhhhhhhhhhhh...................eeee.....eee.................eeeeeee.ee..ee.hhhhhhhhhhhhhhhheeeeee..hhhhhhhhhhhhhhh.......eeeee....hhhhhhhhhhhhhhhhhhhhhhh......eeeeee.hhhhh.......eeeee..hhhhhhhhh.....hhhhh...........eeeeeee................hhhhhhhhhhhhhh..........hhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhh.....hhhhh..hhhhhh...........eeeeeeee.....................hhhhh.hhhhhhhhhhhheeee.hhhhhh.hhhhh...hhhhh......eeeee....ee....eeeee...eee. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4qqz G  14 PPLDLRFWAKERGLRGKTYPLVCHSLDAAAAALVLWNEYLSPGLRDTIASSMETDEEHAGHCIAFWAGLHDIGKLTREFQQQIAIDLSAYPGEELSGEQRSHAAATGKWLPFALPSLGYPNGGLVTGLVAQMLGGHHGTFHPHPSFQSRNPLAEFGFSSPHWEKQRHALLHAVFDATGRPTPPDMLDGPTASVVCGLVILADWLVSQEDFLLERLTSLPADGSASALRAHFETSLRRIPSLLDAAGLRPITVPPATFTESFPHLSKPNGLQASLAKHLPCLCTGPGLVLITAPMGEGKTEAAYHVADLLGKATGRPGRFLALPTMATADQMHTRLKEYARYRVENSSTLALLHSMAWLNPDYAPADPFAATDWLMGRKRGLLAPWAVGTIDQALMAVLRAKHNALRLFGLAGKVVVVDEAHAVDPYMQVLLEQLLRWLGTLDVPVVLLSATLHHSIANSLVKAYLEGARGRRWNRSEPQPVSEVSYPGWLHVDARIGKVTRSSDVDPLPIATTPRKPLEVRLVDVPVKEGALNRSTVLAKELTPLVKQGGCAAIICTTVAEAQGVYDLLSQWFATLGAPDLYLLHSRFPNRQRTEITATIVDLFGKEGAQSGRRPTRGAVLVATQVVEQSLDLDVDLMISDLAPVSLLLQRAGRCWRHEHLGIINRPQWAKQPELVVLTPEQNRAPWFPRSWTSVYPLALLQRTYTLLRRRNGAPVQIPEDVQQLVDDVYDDDSLAEDLEADMERMGEELAQRGLARNAVIPDPDDAEDNLNGLTEFSVLATRFGAGSVRVLCYYVTAGNRWLDPECTVEFPEQGTGREGRFTMADCRDLVARTIPVRMGPWASQLTEDNHPPEAWRESFYLRDLVLIPQAVLPTETGGREWLLDPCKGLIF 944
                                    23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273       283       293       303       313       323       333       343       353    || 368       378    || 403       413       423       433       443       453       463       473       483       493       503       513       523       533       543       553       563       573       583       593       603      |615       625       635       645       655       665       675       685       695       705       715  ||   729       739       749       759       769       779       789       799       809       825       835     ||846       856       866       876       886       896       906       916|      932       942  
                                                                                                                                                                                                                                                                                                                                                                                  358|                383|                                                                                                                                                                                                                610|                                                                                                      718|                                                                                           817|              841|                                                                      916|                     
                                                                                                                                                                                                                                                                                                                                                                                   364                 399                                                                                                                                                                                                                 613                                                                                                       723                                                                                            824               843                                                                       923                     


Chain H from PDB  Type:DNA  Length:11
                                           
                 4qqz H   1 AAAAAAAAAAA  12
                                  ||11 
                                  7|   
                                   9
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(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4QQZ)

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(no "CATH Domain" information available for 4QQZ)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4QQZ)

(-) Gene Ontology  (3, 3)

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/TrEMBL
        Q47PJ0_THEFY | Q47PJ0: 4qqw 4qqx 4qqy

(-) Related Entries Specified in the PDB File

4qqx 4qqy 4qqz