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(-) Description

Title :  STRUCTURAL INVESTIGATION OF HNRNP L
 
Authors :  M. Blatter, F. H. -T. Allain
Date :  25 Jun 14  (Deposition) - 20 May 15  (Release) - 04 Nov 15  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.35
Chains :  Asym./Biol. Unit :  A
Keywords :  Rna Recognition Motif, Rrm, Rna, Rna Binding Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  M. Blatter, S. Dunin-Horkawicz, I. Grishina, C. Maris, S. Thore, T. Maier, A. Bindereif, J. M. Bujnicki, F. H. Allain
The Signature Of The Five-Stranded Vrrm Fold Defined By Functional, Structural And Computational Analysis Of The Hnrnp L Protein.
J. Mol. Biol. V. 427 3001 2015
PubMed-ID: 26051023  |  Reference-DOI: 10.1016/J.JMB.2015.05.020

(-) Compounds

Molecule 1 - HETEROGENOUS NUCLEAR RIBONUCLEOPROTEIN L
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Fragment: UNP RESIDUES 31-245
    Gene: HNRNPL, FBLIM1, HNRNP-L, HNRPL
    Organism Common: BROWN RAT,RAT,RATS
    Organism Scientific: RATTUS NORVEGICUS
    Organism Taxid: 10116
    Synonym: HNRPL PROTEIN, PROTEIN HNRNPL

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 1)

Asymmetric/Biological Unit (1, 1)
No.NameCountTypeFull Name
1PO41Ligand/IonPHOSPHATE ION

(-) Sites  (1, 1)

Asymmetric Unit (1, 1)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREHIS A:501 , SER A:580 , THR A:581BINDING SITE FOR RESIDUE PO4 A 601

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4QPT)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 4QPT)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4QPT)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4QPT)

(-) Exons   (0, 0)

(no "Exon" information available for 4QPT)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:215
                                                                                                                                                                                                                                                       
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ........eeeee.......hhhhhhhhhh....eeeeee.......eeeee.hhhhhhhhhhhhh..ee..ee.eeee....................eee..........hhhhhh.........eeeeeee....hhhhhhhhhhhhh.....eeee........eeeeee..hhhhhhhhhhhhh..ee........ee.eeee....... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4qpt A 372 YGPHADSPVLMVYGLDQSKMNCDRVFNVFCLYGNVEKVKFMKSKPGAAMVEMADGYAVDRAITHLNNNFMFGQKMNVCVSKQPAIMPGQSYGLEDGSCSYKDFSESRNNRFSTPEQAAKNRIQHPSNVLHFFNAPLEVTEENFFEICDELGVKRPTSVKVFSGKSERSSSGLLEWDSKSDALETLGFLNHYQMKNPNGPYPYTLKLCFSTAQHAS 586
                                   381       391       401       411       421       431       441       451       461       471       481       491       501       511       521       531       541       551       561       571       581
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4QPT)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4QPT)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4QPT)

(-) Gene Ontology  (23, 23)

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        HNRPL_RAT | F1LQ48: 2mql 2mqm 2mqn 2mqo 2mqp 2mqq

(-) Related Entries Specified in the PDB File

2mql 2mqm 2mqo