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(-) Description

Title :  STRUCTURAL INVESTIGATION OF HNRNP L
 
Authors :  M. Blatter, F. Allain
Date :  24 Jun 14  (Deposition) - 06 May 15  (Release) - 04 Nov 15  (Revision)
Method :  SOLUTION NMR
Resolution :  NOT APPLICABLE
Chains :  NMR Structure  :  A  (20x)
NMR Structure *:  A  (1x)
Keywords :  Protein, Rrm, Rna Binding Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  M. Blatter, S. Dunin-Horkawicz, I. Grishina, C. Maris, S. Thore, T. Maier, A. Bindereif, J. M. Bujnicki, F. H. Allain
The Signature Of The Five-Stranded Vrrm Fold Defined By Functional, Structural And Computational Analysis Of The Hnrnp L Protein.
J. Mol. Biol. V. 427 3001 2015
PubMed-ID: 26051023  |  Reference-DOI: 10.1016/J.JMB.2015.05.020

(-) Compounds

Molecule 1 - PROTEIN HNRNPL
    ChainsA
    EngineeredYES
    Expression SystemESCHERICHIA COLI
    Expression System Taxid562
    Expression System VectorPTYB11
    FragmentUNP RESIDUES 174-291
    GeneHNRNPL
    Organism CommonRAT
    Organism ScientificRATTUS NORVEGICUS
    Organism Taxid10116

 Structural Features

(-) Chains, Units

  1
NMR Structure (20x)A
NMR Structure * (1x)A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 2MQM)

(-) Sites  (0, 0)

(no "Site" information available for 2MQM)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 2MQM)

(-) Cis Peptide Bonds  (0, 0)

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 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 2MQM)

(-) PROSITE Motifs  (0, 0)

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(-) Exons   (0, 0)

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(-) Sequences/Alignments

NMR Structure
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
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SAPs(SNPs) PROSITE motifs Exons
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Chain A from PDB  Type:PROTEIN  Length:118
                                                                                                                                                      
               SCOP domains ---------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .......hhhhhh....eeeeee.......hhhhhhhhhhhhh.eeeeeee.....eeeeee.hhhhhhhhhhhhh..........eeeee..............eee.......... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------- Transcript
                 2mqm A 174 QKISRPGDSDDSRSVNSVLLFTILNPIYSITTDVLYTICNPCGPVQRIVIFRKNGVQAMVEFDSVQSAQRAKASLNGADIYSGCCTLKIEYAKPTRLNVFKNDQDTWDYTNPNLSGQG 291
                                   183       193       203       213       223       233       243       253       263       273       283        

   Legend:   → Mismatch (orange background)
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 Classification and Annotation

(-) SCOP Domains  (0, 0)

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(-) CATH Domains  (0, 0)

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(-) Pfam Domains  (0, 0)

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(-) Gene Ontology  (26, 31)

NMR Structure(hide GO term definitions)

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        F2Z3R2_RAT | F2Z3R22mql 2mqo 2mqp
        HNRPL_RAT | F1LQ482mql 2mqn 2mqo 2mqp 2mqq 4qpt

(-) Related Entries Specified in the PDB File

bmrb RELATED ID: PDB RELATED DB: 2MQL RELATED ID: PDB RELATED DB: 2MQN RELATED ID: PDB RELATED DB: 2MQO RELATED ID: PDB RELATED DB: 2MQP RELATED ID: PDB RELATED DB: 2MQQ