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(-) Description

Title :  LEOPARD SYNDROME-ASSOCIATED SHP2/Q510E MUTANT
 
Authors :  Z. H. Yu, R. Y. Zhang, C. D. Walls, L. Chen, S. Zhang, L. Wu, L. Wang, S. Liu,
Date :  17 Jan 14  (Deposition) - 24 Sep 14  (Release) - 08 Oct 14  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.20
Chains :  Asym./Biol. Unit :  A
Keywords :  Sh2 Domain, Phosphatase Domain, Hydrolase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  Z. H. Yu, R. Y. Zhang, C. D. Walls, L. Chen, S. Zhang, L. Wu, S. Liu, Z. Y. Zhang
Molecular Basis Of Gain-Of-Function Leopard Syndrome-Associated Shp2 Mutations.
Biochemistry V. 53 4136 2014
PubMed-ID: 24935154  |  Reference-DOI: 10.1021/BI5002695

(-) Compounds

Molecule 1 - TYROSINE-PROTEIN PHOSPHATASE NON-RECEPTOR TYPE 11
    Chains: A
    EC Number: 3.1.3.48
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PET21A+
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 469008
    Expression System Vector Type: PLASMID
    Fragment: N-SH2, C-SH2 AND PTP DOMAIN
    Gene: PTP2C, PTPN11, SHPTP2
    Mutation: YES
    Organism Common: HUMAN
    Organism Scientific: HOMO SAPIENS
    Organism Taxid: 9606
    Synonym: PROTEIN-TYROSINE PHOSPHATASE 1D, PTP-1D, PROTEIN-TYROSINE PHOSPHATASE 2C, PTP-2C, SH-PTP2, SHP-2, SHP2, SH-PTP3

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 4OHI)

(-) Sites  (0, 0)

(no "Site" information available for 4OHI)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4OHI)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 4OHI)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4OHI)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4OHI)

(-) Exons   (0, 0)

(no "Exon" information available for 4OHI)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:502
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .........hhhhhhhhhhhh....eeeeee.......eeeeeee..eeeeeeeee....eee....ee.hhhhhhhhhhh................ee................hhhhhhhhhhhh....eeeeee.......eeeeeee............eeeeeeeeee..eee........hhhhhhhhhhhh.ee.....ee...ee.....ee..hhhhhhhhhhh...hhhhhhhhhhhhhhhh...hhhhhhhhhhhhh.......hhh.eee.....eeeeeee......eeeee.....hhhhhhhhhhhh...eeee....ee..ee...........eeee..eeeeeeeeee...eeeeeeeeee.......eeeeeeee...........hhhhhhhhhhhhhhhhh......eeeee...........................eehhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4ohi A   3 SRRWFHPNITGVEAENLLLTRGVDGSFLARPSKSNPGDFTLSVRRNGAVTHIKIQNTGDYYDLYGGEKFATLAELVQYYMEHHGQLKEKNGDVIELKYPLNCADPTSERWFHGHLSGKEAEKLLTEKGKHGSFLVRESQSHPGDFVLSVRTGDDKGESNDGKSKVTHVMIRCQELKYDVGGGERFDSLTDLVEHYKKNPMVETLGTVLQLKQPLNTTRINAAEIESRVRELSKVKQGFWEEFETLQQQECKLLYSRKEGQRQENKNKNRYKNILPFDHTRVVLHDSDYINANIIMPEKKSYIATQGCLQNTVNDFWRMVFQENSRVIVMTTKEVERGKSKCVKYWPDEYALKEYGVMRVRNVKESAAHDYTLRELKLSKVGQGNTERTVWQYHFRTWPDHGVPSDPGGVLDFLEEVHHKQESIMDAGPVVVHCSAGIGRTGTFIVIDILIDIIREKGVDCDIDVPKTIQMVRSQRSGMVQTEAEYRFIYMAVQHYIETLQRR 528
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232  ||   249       259       269       279       289    || 306      |326       336       346       356       366       376       386       396       406       416       426       436       446       456       466       476       486       496       506       516       526  
                                                                                                                                                                                                                                                                  235|                                                294|        313|                                                                                                                                                                                                            
                                                                                                                                                                                                                                                                   243                                                 302         324
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4OHI)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4OHI)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4OHI)

(-) Gene Ontology  (78, 78)

Asymmetric/Biological Unit(hide GO term definitions)

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  4ohi
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  PTN11_HUMAN | Q06124
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  3.1.3.48
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        PTN11_HUMAN | Q06124: 2shp 3b7o 3mow 3o5x 3tkz 3tl0 3zm0 3zm1 3zm2 3zm3 4dgp 4dgx 4gwf 4h1o 4h34 4je4 4jeg 4jmg 4nwf 4nwg 4ohd 4ohe 4ohh 4ohl 4pvg 4qsy 4rdd 5df6 5ehp 5ehr 5i6v 5ibm 5ibs

(-) Related Entries Specified in the PDB File

4ohd THE SAME PROTEIN CONTAINING DIFFERENT MUTATION
4ohe THE SAME PROTEIN CONTAINING DIFFERENT MUTATION
4ohh THE SAME PROTEIN CONTAINING DIFFERENT MUTATION
4oht