Show PDB file:   
         Plain Text   HTML   (compressed file size)
QuickSearch:   
by PDB,NDB,UniProt,PROSITE Code or Search Term(s)  
(-)Asym./Biol. Unit
(-)Asym./Biol. Unit - sites
collapse expand < >
Image Asym./Biol. Unit
Asym./Biol. Unit  (Jmol Viewer)
Image Asym./Biol. Unit - sites
Asym./Biol. Unit - sites  (Jmol Viewer)

(-) Description

Title :  CRYSTAL STRUCTURE OF MYO-INOSITOL DEHYDROGENASE FROM LACTOBACILLUS CASEI IN COMPLEX WITH NAD AND D-CHIRO-INOSITOL
 
Authors :  D. Bertwistle, D. A. R. Sanders, D. R. J. Palmer
Date :  03 Sep 13  (Deposition) - 04 Mar 15  (Release) - 04 Mar 15  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.60
Chains :  Asym./Biol. Unit :  A,B,C,D
Keywords :  Nad, D-Chiro-Inositol, Sugar Alcohol Dehydrogenases, Rossmann Fold, Dehydrogenase, Nad Binding, Myo-Inositol Binding, Dehydrogenate, Oxidoreductase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  D. Bertwistle, H. Aamudalapalli, D. A. R. Sanders, D. R. J. Palmer
Crystal Structure Of Myo-Inositol Dehydrogenase From Lactobacillus Casei In Complex With Nad And D-Chiro-Inosito
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - INOSITOL 2-DEHYDROGENASE/D-CHIRO-INOSITOL 3-DEHYDROGENASE
    Chains: A, B, C, D
    EC Number: 1.1.1.18
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PQE-80L
    Expression System Strain: XL1-BLUE
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Gene: IDH, IOLG, IOLG1, LCABL_02210
    Organism Scientific: LACTOBACILLUS CASEI
    Organism Taxid: 543734
    Strain: BL23
    Synonym: MYO-INOSITOL 2-DEHYDROGENASE/D-CHIRO-INOSITOL 3- DEHYDROGENASE

 Structural Features

(-) Chains, Units

  1234
Asymmetric/Biological Unit : ABCD

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (4, 19)

Asymmetric/Biological Unit (4, 19)
No.NameCountTypeFull Name
1CBU1Ligand/Ion(1R,2R,3S,4S,5S,6S)-CYCLOHEXANE-1,2,3,4,5,6-HEXOL
2GOL8Ligand/IonGLYCEROL
3NAD4Ligand/IonNICOTINAMIDE-ADENINE-DINUCLEOTIDE
4SO46Ligand/IonSULFATE ION

(-) Sites  (19, 19)

Asymmetric Unit (19, 19)
No.NameEvidenceResiduesDescription
01AC1SOFTWAREGLY A:9 , GLY A:11 , ALA A:12 , MET A:13 , ASP A:35 , ILE A:36 , VAL A:73 , SER A:74 , PHE A:75 , GLY A:76 , HIS A:79 , GLU A:96 , LYS A:97 , GLY A:124 , HIS A:176 , TYR A:282 , HOH A:532 , HOH A:620 , HOH A:637BINDING SITE FOR RESIDUE NAD A 401
02AC2SOFTWAREILE A:259 , GLN A:266 , GLN A:267 , THR A:268 , GLN B:266 , GLN B:267 , THR B:268BINDING SITE FOR RESIDUE GOL A 402
03AC3SOFTWAREARG A:152 , GLU A:241 , ARG C:152 , ALA C:153 , SER C:154 , LYS C:239 , LEU C:240 , GLU C:241 , GOL C:404BINDING SITE FOR RESIDUE GOL A 403
04AC4SOFTWARETHR A:26 , GLY A:27 , HOH A:664 , HOH A:685 , THR D:26 , GLY D:27BINDING SITE FOR RESIDUE SO4 A 404
05AC5SOFTWAREARG A:198 , HOH A:636 , HOH A:690 , ALA C:147 , PRO C:148 , LYS C:220 , HOH C:576BINDING SITE FOR RESIDUE SO4 A 405
06AC6SOFTWAREGLY B:9 , GLY B:11 , ALA B:12 , MET B:13 , ASP B:35 , ILE B:36 , VAL B:73 , SER B:74 , PHE B:75 , GLY B:76 , ALA B:78 , HIS B:79 , GLU B:96 , LYS B:97 , GLY B:124 , MET B:126 , HIS B:176 , TYR B:282 , HOH B:543 , HOH B:553 , HOH B:605 , HOH B:632 , HOH B:665 , HOH B:679 , HOH B:725 , HOH B:730 , HOH B:757 , HOH B:770 , HOH C:660BINDING SITE FOR RESIDUE NAD B 401
07AC7SOFTWARELYS A:295 , HOH A:515 , LEU B:140 , ASP B:141 , GLY B:146 , ALA B:147 , PRO B:148 , HOH B:638BINDING SITE FOR RESIDUE GOL B 402
08AC8SOFTWAREARG B:198 , HOH B:588 , HOH B:760 , PRO D:148 , LYS D:220BINDING SITE FOR RESIDUE SO4 B 403
09AC9SOFTWAREHOH B:736 , HOH B:759 , PHE C:75 , GLY C:76 , GLY C:77BINDING SITE FOR RESIDUE SO4 B 404
10BC1SOFTWAREGLY C:11 , ALA C:12 , MET C:13 , ASP C:35 , ILE C:36 , VAL C:73 , SER C:74 , PHE C:75 , GLY C:76 , HIS C:79 , GLU C:96 , LYS C:97 , GLY C:124 , HIS C:176 , TYR C:282 , HOH C:504 , HOH C:595 , HOH C:611 , HOH C:633 , HOH C:659 , HOH C:691 , HOH C:695 , HOH C:716 , HOH C:779BINDING SITE FOR RESIDUE NAD C 401
11BC2SOFTWAREILE C:259 , GLN C:266 , GLN C:267 , THR C:268 , HOH C:704 , GLN D:266 , GLN D:267 , THR D:268BINDING SITE FOR RESIDUE GOL C 402
12BC3SOFTWAREVAL C:24 , LEU C:25 , HOH C:579 , HOH C:606 , HOH C:785BINDING SITE FOR RESIDUE GOL C 403
13BC4SOFTWAREARG A:152 , ALA A:153 , SER A:154 , GLU A:241 , GOL A:403 , ARG C:152 , GLU C:241 , HOH C:625BINDING SITE FOR RESIDUE GOL C 404
14BC5SOFTWAREALA A:147 , PRO A:148 , LYS A:220 , ARG C:198 , HOH C:668 , HOH C:729BINDING SITE FOR RESIDUE SO4 C 405
15BC6SOFTWAREGLY D:11 , ALA D:12 , MET D:13 , ASP D:35 , ILE D:36 , VAL D:73 , SER D:74 , PHE D:75 , ALA D:78 , HIS D:79 , GLU D:96 , LYS D:97 , MET D:126 , ASP D:172 , HIS D:176 , TRP D:274 , TYR D:282 , CBU D:402 , HOH D:504 , HOH D:537 , HOH D:548 , HOH D:586 , HOH D:607 , HOH D:663 , HOH D:664 , HOH D:678 , HOH D:682 , HOH D:683 , HOH D:696 , HOH D:778 , HOH D:785BINDING SITE FOR RESIDUE NAD D 401
16BC7SOFTWARELYS D:97 , HIS D:155 , ASN D:157 , ASP D:172 , THR D:173 , HIS D:176 , TYR D:236 , NAD D:401 , HOH D:526 , HOH D:607 , HOH D:610BINDING SITE FOR RESIDUE CBU D 402
17BC8SOFTWARELEU D:62 , GLN D:63 , ASP D:64 , THR D:89 , ASP D:90 , LYS D:91BINDING SITE FOR RESIDUE GOL D 403
18BC9SOFTWARETYR D:129 , ARG D:134 , GLU D:288 , SO4 D:405 , HOH D:674 , HOH D:828BINDING SITE FOR RESIDUE GOL D 404
19CC1SOFTWAREARG D:134 , TRP D:183 , GOL D:404BINDING SITE FOR RESIDUE SO4 D 405

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4MJL)

(-) Cis Peptide Bonds  (8, 8)

Asymmetric/Biological Unit
No.Residues
1Lys A:97 -Pro A:98
2Asp A:210 -Pro A:211
3Lys B:97 -Pro B:98
4Asp B:210 -Pro B:211
5Lys C:97 -Pro C:98
6Asp C:210 -Pro C:211
7Lys D:97 -Pro D:98
8Asp D:210 -Pro D:211

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4MJL)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4MJL)

(-) Exons   (0, 0)

(no "Exon" information available for 4MJL)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:339
                                                                                                                                                                                                                                                                                                                                                                                   
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeee..hhhhhhhhhhhhhh...eeeeeee..hhhhhhhhhhhh....ee..hhhhhh......eeee..hhhhhhhhhhhhh....eeee......hhhhhhhhhhhhh......eee.hhhhhhhhhhhhhhhhhh.....eeeeeeeee..........hhhhhh.hhhhhhhhhhhhh..eeeeeee................eeeeeee....eeeeeee.......eeeeeeee...eee........eeee..eeeee...hhhhhhhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhhh..ee......hhhhh Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4mjl A   1 MVVKVGVIGTGAMGRAHIDRLTNVLTGAEVVAVTDIDHEAAEAAVRDFHLNAKVYPDDTSLLQDPDIDAVFVVSFGGAHEATVLKALDTDKFIFTEKPLATTLEGAKRIVDKELTKSKKVIQVGFMRRYDQGIRALKEKLDTGIIGAPLVVRASHINPNVASNYSNEMAITDTLIHEIDEMHWLLDDEYTSIQITYPRQSAEVRNEGLHDPQLATLTTKKGTVIQVLVHVTAQYGYEVKLEVIGETGELQLPNYGLGPILRSNANQQTAVEMSWINRFIQAYNTEVQEFIDEVAKSEPPVGPSAWDGYIAAITAAAANRSQKDQETVLINVAGTPTFYQ 339
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330         


Chain B from PDB  Type:PROTEIN  Length:339
                                                                                                                                                                                                                                                                                                                                                                                   
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeee..hhhhhhhhhhhhhh...eeeeeee..hhhhhhhhhhhh....ee..hhhhhhh.....eeee..hhhhhhhhhhhhh....eeee......hhhhhhhhhhhhhh.....eee.hhhhhhhhhhhhhhhhhh.....eeeeeeeee..........hhhhhh.hhhhhhhhhhhhh..eeeeeee................eeeeeee....eeeeeee.......eeeeeeee...eee........eeee..eeeee...hhhhhhhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhh.....ee......hhhhh Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4mjl B   1 MVVKVGVIGTGAMGRAHIDRLTNVLTGAEVVAVTDIDHEAAEAAVRDFHLNAKVYPDDTSLLQDPDIDAVFVVSFGGAHEATVLKALDTDKFIFTEKPLATTLEGAKRIVDKELTKSKKVIQVGFMRRYDQGIRALKEKLDTGIIGAPLVVRASHINPNVASNYSNEMAITDTLIHEIDEMHWLLDDEYTSIQITYPRQSAEVRNEGLHDPQLATLTTKKGTVIQVLVHVTAQYGYEVKLEVIGETGELQLPNYGLGPILRSNANQQTAVEMSWINRFIQAYNTEVQEFIDEVAKSEPPVGPSAWDGYIAAITAAAANRSQKDQETVLINVAGTPTFYQ 339
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330         


Chain C from PDB  Type:PROTEIN  Length:339
                                                                                                                                                                                                                                                                                                                                                                                   
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeee..hhhhhhhhhhhhhh...eeeeeee..hhhhhhhhhhhh....ee..hhhhhhh.....eeee..hhhhhhhhhhhhh....eeee......hhhhhhhhhhhhhh.....eee.hhhhhhhhhhhhhhhhh......eeeeeeeee..........hhhhhh.hhhhhhhhhhhhh..eeeeeee................eeeeeee....eeeeeee.......eeeeeeee...eee........eeee..eeeee...hhhhhhhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhhh..ee......hhhhh Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4mjl C   1 MVVKVGVIGTGAMGRAHIDRLTNVLTGAEVVAVTDIDHEAAEAAVRDFHLNAKVYPDDTSLLQDPDIDAVFVVSFGGAHEATVLKALDTDKFIFTEKPLATTLEGAKRIVDKELTKSKKVIQVGFMRRYDQGIRALKEKLDTGIIGAPLVVRASHINPNVASNYSNEMAITDTLIHEIDEMHWLLDDEYTSIQITYPRQSAEVRNEGLHDPQLATLTTKKGTVIQVLVHVTAQYGYEVKLEVIGETGELQLPNYGLGPILRSNANQQTAVEMSWINRFIQAYNTEVQEFIDEVAKSEPPVGPSAWDGYIAAITAAAANRSQKDQETVLINVAGTPTFYQ 339
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330         


Chain D from PDB  Type:PROTEIN  Length:339
                                                                                                                                                                                                                                                                                                                                                                                   
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeee..hhhhhhhhhhhhhh...eeeeeee..hhhhhhhhhhhh....ee..hhhhhhh.....eeee..hhhhhhhhhhhhh....eeee......hhhhhhhhhhhhh......eee.hhhhhhhhhhhhhhhhhh.....eeeeeeeee..........hhhhhhhhhhhhhhhhhhhh..eeeeeee................eeeeeee....eeeeeee.......eeeeeeee...eee........eeee..eeeee...hhhhhhhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhhh..ee......hhhhh Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4mjl D   1 MVVKVGVIGTGAMGRAHIDRLTNVLTGAEVVAVTDIDHEAAEAAVRDFHLNAKVYPDDTSLLQDPDIDAVFVVSFGGAHEATVLKALDTDKFIFTEKPLATTLEGAKRIVDKELTKSKKVIQVGFMRRYDQGIRALKEKLDTGIIGAPLVVRASHINPNVASNYSNEMAITDTLIHEIDEMHWLLDDEYTSIQITYPRQSAEVRNEGLHDPQLATLTTKKGTVIQVLVHVTAQYGYEVKLEVIGETGELQLPNYGLGPILRSNANQQTAVEMSWINRFIQAYNTEVQEFIDEVAKSEPPVGPSAWDGYIAAITAAAANRSQKDQETVLINVAGTPTFYQ 339
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4MJL)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4MJL)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4MJL)

(-) Gene Ontology  (0, 0)

Asymmetric/Biological Unit(hide GO term definitions)
    (no "Gene Ontology" information available for 4MJL)

 Visualization

(-) Interactive Views

Asymmetric/Biological Unit
  Complete Structure
    Jena3D(integrated viewing of ligand, site, SAP, PROSITE, SCOP information)
    WebMol | AstexViewer[tm]@PDBe
(Java Applets, require no local installation except for Java; loading may be slow)
    STRAP
(Java WebStart application, automatic local installation, requires Java; full application with system access!)
    RasMol
(require local installation)
    Molscript (VRML)
(requires installation of a VRML viewer; select preferred view via VRML and generate a mono or stereo PDF format file)
 
  Ligands, Modified Residues, Ions
    CBU  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
    GOL  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
    NAD  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
    SO4  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
 
  Sites
    AC1  [ RasMol ]  +environment [ RasMol ]
    AC2  [ RasMol ]  +environment [ RasMol ]
    AC3  [ RasMol ]  +environment [ RasMol ]
    AC4  [ RasMol ]  +environment [ RasMol ]
    AC5  [ RasMol ]  +environment [ RasMol ]
    AC6  [ RasMol ]  +environment [ RasMol ]
    AC7  [ RasMol ]  +environment [ RasMol ]
    AC8  [ RasMol ]  +environment [ RasMol ]
    AC9  [ RasMol ]  +environment [ RasMol ]
    BC1  [ RasMol ]  +environment [ RasMol ]
    BC2  [ RasMol ]  +environment [ RasMol ]
    BC3  [ RasMol ]  +environment [ RasMol ]
    BC4  [ RasMol ]  +environment [ RasMol ]
    BC5  [ RasMol ]  +environment [ RasMol ]
    BC6  [ RasMol ]  +environment [ RasMol ]
    BC7  [ RasMol ]  +environment [ RasMol ]
    BC8  [ RasMol ]  +environment [ RasMol ]
    BC9  [ RasMol ]  +environment [ RasMol ]
    CC1  [ RasMol ]  +environment [ RasMol ]
 
  Cis Peptide Bonds
    Asp A:210 - Pro A:211   [ RasMol ]  
    Asp B:210 - Pro B:211   [ RasMol ]  
    Asp C:210 - Pro C:211   [ RasMol ]  
    Asp D:210 - Pro D:211   [ RasMol ]  
    Lys A:97 - Pro A:98   [ RasMol ]  
    Lys B:97 - Pro B:98   [ RasMol ]  
    Lys C:97 - Pro C:98   [ RasMol ]  
    Lys D:97 - Pro D:98   [ RasMol ]  
 

(-) Still Images

Jmol
  protein: cartoon or spacefill or dots and stick; nucleic acid: cartoon and stick; ligands: spacefill; active site: stick
[ Asym./Biol. Unit PNG format | Asym./Biol. Unit - sites PNG format ](automatic orientation, automatically generated)
Molscript
  protein, nucleic acid: cartoon; ligands: spacefill; active site: ball and stick
[ mono PDF format | stereo PDF format ](default orientation, automatically generated)

 Databases and Analysis Tools

(-) Databases

Access by PDB/NDB ID
  4mjl
    Family and Domain Information: ProDom | SYSTERS
    General Structural Information: GlycoscienceDB | MMDB | NDB | OCA | PDB | PDBe | PDBj | PDBsum | PDBWiki | PQS | PROTEOPEDIA
    Orientation in Membranes: OPM
    Protein Surface: SURFACE
    Secondary Structure: DSSP (structure derived) | HSSP (homology derived)
    Structural Genomics: GeneCensus
    Structural Neighbours: CE | VAST
    Structure Classification: CATH | Dali | SCOP
    Validation and Original Data: BMRB Data View | BMRB Restraints Grid | EDS | PROCHECK | RECOORD | WHAT_CHECK
 
Access by UniProt ID/Accession number
  A0A0J9X1Y2_L | A0A0J9X1Y2
    Comparative Protein Structure Models: ModBase
    Genomic Information: Ensembl
    Protein-protein Interaction: DIP
    Sequence, Family and Domain Information: InterPro | Pfam | SMART | UniProtKB/TrEMBL
 
Access by Enzyme Classificator   (EC Number)
  1.1.1.18
    General Enzyme Information: BRENDA | EC-PDB | Enzyme | IntEnz
    Pathway: KEGG | MetaCyc
 
Access by Disease Identifier   (MIM ID)
  (no 'MIM ID' available)
    Disease Information: OMIM
 
Access by GenAge ID
  (no 'GenAge ID' available)
    Age Related Information: GenAge

(-) Analysis Tools

Access by PDB/NDB ID
    Domain Information: XDom
    Interatomic Contacts of Structural Units: CSU
    Ligand-protein Contacts: LPC
    Protein Cavities: castP
    Sequence and Secondary Structure: PDBCartoon
    Structure Alignment: STRAP(Java WebStart application, automatic local installation, requires Java; full application with system access!)
    Structure and Sequence Browser: STING
 
Access by UniProt ID/Accession number
  A0A0J9X1Y2_L | A0A0J9X1Y2
    Protein Disorder Prediction: DisEMBL | FoldIndex | GLOBPLOT (for more information see DisProt)

 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/TrEMBL
        A0A0J9X1Y2_L | A0A0J9X1Y2: 4mie 4min 4mio 4miy

(-) Related Entries Specified in the PDB File

3cea 3mz0 3nt4 3ntq 4mie 4min 4mio 4miy 4mkx 4mkz