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(-) Description

Title :  CRYSTAL STRUCTURE OF APO SCYLLO-INOSITOL DEHYDROGENASE FROM LACTOBACILLUS CASEI AT 77K
 
Authors :  D. Bertwistle, V. Linda, D. A. R. Sanders, D. R. J. Palmer
Date :  06 Sep 13  (Deposition) - 04 Mar 15  (Release) - 04 Mar 15  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.60
Chains :  Asym. Unit :  A
Biol. Unit 1:  A  (4x)
Keywords :  Nad, Sugar Alcohol Dehydrogenases, Rossmann Fold, Dehydrogenase, Scyllo-Inositol, Dehydrogenate, Oxidoreductase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  D. Bertwistle, H. Aamudalapalli, L. Vogt, D. A. R. Sanders, D. R. J. Palmer
Crystal Structure Of Apo Scyllo-Inositol Dehydrogenase From Lactobacillus Casei At 77K
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - INOSITOL DEHYDROGENASE
    Chains: A
    EC Number: 1.1.1.-
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PQE-80L
    Expression System Strain: XL1-BLUE
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Gene: IDH, IOLG, IOLG2, LCABL_02220
    Organism Scientific: LACTOBACILLUS CASEI
    Organism Taxid: 543734
    Strain: BL23
    Synonym: SCYLLO-INOSITOL DEHYDROGENASE

 Structural Features

(-) Chains, Units

  1
Asymmetric Unit : A
Biological Unit 1 (4x): A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 1)

Asymmetric Unit (1, 1)
No.NameCountTypeFull Name
1CIT1Ligand/IonCITRIC ACID
Biological Unit 1 (1, 4)
No.NameCountTypeFull Name
1CIT4Ligand/IonCITRIC ACID

(-) Sites  (1, 1)

Asymmetric Unit (1, 1)
No.NameEvidenceResiduesDescription
1AC1SOFTWARELEU A:16 , LYS A:99 , MET A:128 , HIS A:186 , TYR A:247 , PHE A:287 , HOH A:506 , HOH A:594 , HOH A:604 , HOH A:634BINDING SITE FOR RESIDUE CIT A 401

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4MKZ)

(-) Cis Peptide Bonds  (1, 1)

Asymmetric Unit
No.Residues
1Lys A:99 -Pro A:100

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4MKZ)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4MKZ)

(-) Exons   (0, 0)

(no "Exon" information available for 4MKZ)

(-) Sequences/Alignments

Asymmetric Unit
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:336
                                                                                                                                                                                                                                                                                                                                                                                
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .....eeeeee..hhhhhhhhhhhhhh...eeeeeee..hhhhhhhhhhhhh..eee.hhhhhhhhh...eeee..hhhhhhhhhhhhhhh..eeee......hhhhhhhhhhhhhh.....eee.hhhhhhhhhhhhhhhhhh.....eeeeeeeeeee..hhhhhh..hhhhhhhhhhhhhhhhhhh..eeeeeeeee...hhhhh......eeeeeeee....eeeeeeeeee....eeeeeeee...eeee..........eee..eee.....hhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhh..ee... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 4mkz A   1 MTQKTIKIGIVGLGRLGKIHATNIATKIQHAKLQAATSVVPAELDWAKKELGVEEVFEDFDDMVQHADIDAVFIVSPSGFHLQQIESALNAGKHVFSEKPIGLDIEAIEHTQQVIAQHANLKFQLGFMRRFDDSYRYAKQLVDQGKIGDITLIRSYSIDPAAGMASFVSGGLFLDMSIHDIDVIRWFTGKEIDKVWAIGLNRAYPVLDKAGELETGAALMQLEDKTMAILVAGRNAAHGYHVETEIIGTKGMLRIAQVPEKNLVTVMNEEGIIRPTSQNFPERFAQAFLSEEQAFVNSILNNQDVGITAEDGLQGTKAALALQEAFEKNDIVQVAS 343
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                                                                                                                                                                                                 168|                                                                                                                                                                       
                                                                                                                                                                                                  176
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 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4MKZ)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4MKZ)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4MKZ)

(-) Gene Ontology  (3, 3)

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        A5YBJ8_LACCA | A5YBJ8: 4mkx

(-) Related Entries Specified in the PDB File

3cea 3mz0 3nt4 3ntq 4mie 4min 4mio 4miy 4mjl 4mkx