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(-) Description

Title :  URACIL BINDING POCKET IN VACCINIA VIRUS URACIL DNA GLYCOSYLASE
 
Authors :  N. Schormann, D. Chattopadhyay
Date :  31 Jul 13  (Deposition) - 11 Dec 13  (Release) - 05 Feb 14  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.03
Chains :  Asym. Unit :  A,B,C,D,E,F,G,H,I,J,K,L
Biol. Unit 1:  A,F  (1x)
Biol. Unit 2:  B,E  (1x)
Biol. Unit 3:  C,K  (1x)
Biol. Unit 4:  D,H  (1x)
Biol. Unit 5:  G,J  (1x)
Biol. Unit 6:  I,L  (1x)
Keywords :  Alpha/Beta Dna Glycosylase Fold, Viral Processivity Factor, Dna Binding Component, Dna Repair, A20, Hydrolase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  N. Schormann, S. Banerjee, R. Ricciardi, D. Chattopadhyay
Structure Of The Uracil Complex Of Vaccinia Virus Uracil Dn Glycosylase.
Acta Crystallogr. , Sect. F V. 69 1328 2013
PubMed-ID: 24316823  |  Reference-DOI: 10.1107/S1744309113030613

(-) Compounds

Molecule 1 - URACIL-DNA GLYCOSYLASE
    Chains: A, B, C, D, E, F, G, H, I, J, K, L
    EC Number: 3.2.2.27
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PET15B
    Expression System Strain: ROSETTA(DE3)PLYSS
    Expression System Taxid: 469008
    Expression System Vector Type: PLASMID
    Gene: ACAM3000_MVA_101, D4, MVA101R, UNG
    Mutation: YES
    Organism Common: VACV
    Organism Scientific: VACCINIA VIRUS
    Organism Taxid: 10245
    Strain: VACV-WR-109
    Synonym: UDG

 Structural Features

(-) Chains, Units

  123456789101112
Asymmetric Unit : ABCDEFGHIJKL
Biological Unit 1 (1x): A    F      
Biological Unit 2 (1x):  B  E       
Biological Unit 3 (1x):   C       K 
Biological Unit 4 (1x):    D   H    
Biological Unit 5 (1x):       G  J  
Biological Unit 6 (1x):         I  L

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (5, 62)

Asymmetric Unit (5, 62)
No.NameCountTypeFull Name
1CL14Ligand/IonCHLORIDE ION
2DMS10Ligand/IonDIMETHYL SULFOXIDE
3EDO16Ligand/Ion1,2-ETHANEDIOL
4K10Ligand/IonPOTASSIUM ION
5URA12Ligand/IonURACIL
Biological Unit 1 (3, 8)
No.NameCountTypeFull Name
1CL-1Ligand/IonCHLORIDE ION
2DMS2Ligand/IonDIMETHYL SULFOXIDE
3EDO4Ligand/Ion1,2-ETHANEDIOL
4K-1Ligand/IonPOTASSIUM ION
5URA2Ligand/IonURACIL
Biological Unit 2 (3, 10)
No.NameCountTypeFull Name
1CL-1Ligand/IonCHLORIDE ION
2DMS4Ligand/IonDIMETHYL SULFOXIDE
3EDO4Ligand/Ion1,2-ETHANEDIOL
4K-1Ligand/IonPOTASSIUM ION
5URA2Ligand/IonURACIL
Biological Unit 3 (2, 3)
No.NameCountTypeFull Name
1CL-1Ligand/IonCHLORIDE ION
2DMS-1Ligand/IonDIMETHYL SULFOXIDE
3EDO1Ligand/Ion1,2-ETHANEDIOL
4K-1Ligand/IonPOTASSIUM ION
5URA2Ligand/IonURACIL
Biological Unit 4 (3, 6)
No.NameCountTypeFull Name
1CL-1Ligand/IonCHLORIDE ION
2DMS2Ligand/IonDIMETHYL SULFOXIDE
3EDO2Ligand/Ion1,2-ETHANEDIOL
4K-1Ligand/IonPOTASSIUM ION
5URA2Ligand/IonURACIL
Biological Unit 5 (3, 6)
No.NameCountTypeFull Name
1CL-1Ligand/IonCHLORIDE ION
2DMS2Ligand/IonDIMETHYL SULFOXIDE
3EDO2Ligand/Ion1,2-ETHANEDIOL
4K-1Ligand/IonPOTASSIUM ION
5URA2Ligand/IonURACIL
Biological Unit 6 (2, 5)
No.NameCountTypeFull Name
1CL-1Ligand/IonCHLORIDE ION
2DMS-1Ligand/IonDIMETHYL SULFOXIDE
3EDO3Ligand/Ion1,2-ETHANEDIOL
4K-1Ligand/IonPOTASSIUM ION
5URA2Ligand/IonURACIL

(-) Sites  (62, 62)

Asymmetric Unit (62, 62)
No.NameEvidenceResiduesDescription
01AC1SOFTWARELEU A:38 , ARG A:39 , ASP A:40 , GLU A:41 , HOH A:616BINDING SITE FOR RESIDUE DMS A 301
02AC2SOFTWAREASP A:68 , PRO A:69 , URA A:308 , HOH A:495 , HOH A:546 , HOH A:631BINDING SITE FOR RESIDUE K A 302
03AC3SOFTWARELYS A:160 , TYR A:180 , HIS A:181BINDING SITE FOR RESIDUE CL A 303
04AC4SOFTWARETYR A:70 , SER A:88BINDING SITE FOR RESIDUE CL A 304
05AC5SOFTWAREILE A:103 , TYR A:105BINDING SITE FOR RESIDUE EDO A 305
06AC6SOFTWAREGLU A:190 , HOH A:468 , HOH E:456BINDING SITE FOR RESIDUE EDO A 306
07AC7SOFTWAREASP A:192 , ARG A:193 , HOH A:563 , GLU F:203 , ASN F:206 , HOH F:575BINDING SITE FOR RESIDUE EDO A 307
08AC8SOFTWAREGLY A:66 , ILE A:67 , ASP A:68 , TYR A:70 , PRO A:78 , PHE A:79 , ASN A:120 , HIS A:181 , K A:302 , HOH A:412BINDING SITE FOR RESIDUE URA A 308
09AC9SOFTWARELYS B:160 , ARG B:167 , ILE B:177 , VAL B:178 , HOH B:430 , THR E:175 , LEU E:204BINDING SITE FOR RESIDUE DMS B 301
10BC1SOFTWARETHR B:175 , LEU B:204 , ARG E:167 , VAL E:178BINDING SITE FOR RESIDUE DMS B 302
11BC2SOFTWAREILE B:67 , TYR B:121 , ASP B:162 , ILE B:166 , LYS B:169 , HOH B:468BINDING SITE FOR RESIDUE DMS B 303
12BC3SOFTWARETHR B:149 , VAL B:152 , PRO B:173 , EDO B:309 , HOH B:420 , HOH F:444BINDING SITE FOR RESIDUE K B 304
13BC4SOFTWAREASP B:68 , PRO B:69 , HOH B:596BINDING SITE FOR RESIDUE K B 305
14BC5SOFTWAREARG B:167 , THR B:176 , ARG E:167 , THR E:176 , HOH E:406BINDING SITE FOR RESIDUE CL B 306
15BC6SOFTWARELYS B:160 , TYR B:180 , HIS B:181BINDING SITE FOR RESIDUE CL B 307
16BC7SOFTWAREARG B:61 , LYS B:207 , ALA B:208 , HOH F:476BINDING SITE FOR RESIDUE CL B 308
17BC8SOFTWARESER B:153 , PRO B:173 , ASP B:205 , K B:304 , HOH E:574BINDING SITE FOR RESIDUE EDO B 309
18BC9SOFTWAREILE B:103 , TYR B:105 , HOH B:548BINDING SITE FOR RESIDUE EDO B 310
19CC1SOFTWAREARG B:98 , LEU B:99BINDING SITE FOR RESIDUE EDO B 311
20CC2SOFTWAREGLY B:66 , ILE B:67 , ASP B:68 , TYR B:70 , PRO B:78 , PHE B:79 , ASN B:120 , HIS B:181 , HOH B:402BINDING SITE FOR RESIDUE URA B 312
21CC3SOFTWAREASP C:68 , PRO C:69 , THR C:130 , HOH C:492 , HOH C:493BINDING SITE FOR RESIDUE K C 301
22CC4SOFTWARELYS C:160 , TYR C:180 , HIS C:181BINDING SITE FOR RESIDUE CL C 302
23CC5SOFTWAREGLY C:66 , ILE C:67 , ASP C:68 , TYR C:70 , PRO C:78 , PHE C:79 , ASN C:120 , HIS C:181 , HOH C:412 , HOH C:493BINDING SITE FOR RESIDUE URA C 303
24CC6SOFTWAREASP D:68 , PRO D:69 , URA D:305 , HOH D:495BINDING SITE FOR RESIDUE K D 301
25CC7SOFTWARELYS D:160 , TYR D:180 , HIS D:181BINDING SITE FOR RESIDUE CL D 302
26CC8SOFTWAREPHE D:84 , TYR D:105 , LYS D:106BINDING SITE FOR RESIDUE EDO D 303
27CC9SOFTWARETHR D:149 , LYS D:150 , HIS D:151 , VAL D:152 , VAL D:174 , ASP G:186BINDING SITE FOR RESIDUE EDO D 304
28DC1SOFTWAREGLY D:66 , ILE D:67 , ASP D:68 , TYR D:70 , PRO D:78 , PHE D:79 , ASN D:120 , HIS D:181 , K D:301 , HOH D:408BINDING SITE FOR RESIDUE URA D 305
29DC2SOFTWAREGLY E:159 , LYS E:160 , THR E:161 , ASP E:162BINDING SITE FOR RESIDUE DMS E 301
30DC3SOFTWARETHR E:149 , VAL E:152 , PRO E:173 , HOH E:567 , HOH E:568BINDING SITE FOR RESIDUE K E 302
31DC4SOFTWAREASP E:68 , PRO E:69 , URA E:307 , HOH E:571 , HOH E:572 , HOH E:573BINDING SITE FOR RESIDUE K E 303
32DC5SOFTWARELYS E:160 , TYR E:180 , HIS E:181BINDING SITE FOR RESIDUE CL E 304
33DC6SOFTWARETYR E:70 , SER E:88 , HOH E:576BINDING SITE FOR RESIDUE CL E 305
34DC7SOFTWARETYR E:105BINDING SITE FOR RESIDUE EDO E 306
35DC8SOFTWAREGLY E:66 , ILE E:67 , ASP E:68 , TYR E:70 , PRO E:78 , PHE E:79 , ASN E:120 , HIS E:181 , K E:303 , HOH E:432 , HOH E:571BINDING SITE FOR RESIDUE URA E 307
36DC9SOFTWAREILE F:67 , TYR F:121 , ASP F:162 , ASN F:165 , LYS F:169BINDING SITE FOR RESIDUE DMS F 301
37EC1SOFTWAREASP F:68 , PRO F:69 , THR F:130 , URA F:305 , HOH F:584BINDING SITE FOR RESIDUE K F 302
38EC2SOFTWAREGLY F:159 , LYS F:160 , HIS F:181 , HOH F:450BINDING SITE FOR RESIDUE CL F 303
39EC3SOFTWAREILE F:103 , TYR F:105BINDING SITE FOR RESIDUE EDO F 304
40EC4SOFTWAREGLY F:66 , ILE F:67 , ASP F:68 , TYR F:70 , PRO F:78 , PHE F:79 , ASN F:120 , K F:302 , HOH F:409BINDING SITE FOR RESIDUE URA F 305
41EC5SOFTWARETYR G:70 , SER G:88 , HOH G:446BINDING SITE FOR RESIDUE CL G 301
42EC6SOFTWARETYR G:121 , TYR G:122 , ASP G:162 , HOH G:428BINDING SITE FOR RESIDUE DMS G 302
43EC7SOFTWAREASP G:68 , PRO G:69 , URA G:306 , HOH G:539 , HOH G:540BINDING SITE FOR RESIDUE K G 303
44EC8SOFTWAREILE G:103 , TYR G:105BINDING SITE FOR RESIDUE EDO G 304
45EC9SOFTWARELYS G:160 , TYR G:180 , HIS G:181BINDING SITE FOR RESIDUE CL G 305
46FC1SOFTWAREGLY G:66 , ILE G:67 , ASP G:68 , TYR G:70 , PRO G:78 , PHE G:79 , ASN G:120 , HIS G:181 , K G:303 , HOH G:405 , HOH G:540BINDING SITE FOR RESIDUE URA G 306
47FC2SOFTWAREGLU G:32 , SER G:35 , TRP G:36BINDING SITE FOR RESIDUE EDO G 307
48FC3SOFTWARELYS H:160 , TYR H:180 , HIS H:181BINDING SITE FOR RESIDUE CL H 301
49FC4SOFTWAREILE D:197 , THR H:175 , LEU H:201 , ASP H:205BINDING SITE FOR RESIDUE DMS H 302
50FC5SOFTWARETYR H:121 , TYR H:122 , ASP H:162 , ASN H:165 , ILE H:166 , LYS H:169BINDING SITE FOR RESIDUE DMS H 303
51FC6SOFTWAREGLY H:66 , ILE H:67 , ASP H:68 , TYR H:70 , PRO H:78 , PHE H:79 , ASN H:120 , HIS H:181BINDING SITE FOR RESIDUE URA H 304
52FC7SOFTWAREILE I:103 , TYR I:105BINDING SITE FOR RESIDUE EDO I 301
53FC8SOFTWARETYR I:121 , TYR I:122 , ASP I:162 , PHE I:163 , ILE I:166BINDING SITE FOR RESIDUE EDO I 302
54FC9SOFTWAREGLY I:66 , ILE I:67 , ASP I:68 , TYR I:70 , PRO I:78 , PHE I:79 , ASN I:120 , HIS I:181 , HOH I:410BINDING SITE FOR RESIDUE URA I 303
55GC1SOFTWAREGLY J:66 , ILE J:67 , ASP J:68 , TYR J:70 , PRO J:78 , PHE J:79 , ASN J:120 , HIS J:181 , K J:303 , HOH J:415BINDING SITE FOR RESIDUE URA J 301
56GC2SOFTWARETYR J:121 , ASP J:162 , ASN J:165 , LYS J:169BINDING SITE FOR RESIDUE DMS J 302
57GC3SOFTWAREASP J:68 , PRO J:69 , THR J:130 , URA J:301 , HOH J:505 , HOH J:506 , HOH J:507BINDING SITE FOR RESIDUE K J 303
58GC4SOFTWARELYS K:160 , TYR K:180 , HIS K:181 , ALA K:184BINDING SITE FOR RESIDUE CL K 301
59GC5SOFTWAREASP K:162 , ILE K:166 , LYS K:169BINDING SITE FOR RESIDUE EDO K 302
60GC6SOFTWAREGLY K:66 , ILE K:67 , ASP K:68 , TYR K:70 , PRO K:78 , PHE K:79 , ASN K:120 , HIS K:181 , HOH K:424 , HOH K:460BINDING SITE FOR RESIDUE URA K 303
61GC7SOFTWARETYR L:121 , TYR L:122 , ASP L:162 , LYS L:169BINDING SITE FOR RESIDUE EDO L 301
62GC8SOFTWAREGLY L:66 , ILE L:67 , ASP L:68 , TYR L:70 , PRO L:78 , PHE L:79 , ASN L:120 , HIS L:181 , HOH L:416 , HOH L:418BINDING SITE FOR RESIDUE URA L 302

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4LZB)

(-) Cis Peptide Bonds  (24, 24)

Asymmetric Unit
No.Residues
1Ala A:9 -Pro A:10
2Ser A:43 -Pro A:44
3Ala B:9 -Pro B:10
4Ser B:43 -Pro B:44
5Ala C:9 -Pro C:10
6Ser C:43 -Pro C:44
7Ala D:9 -Pro D:10
8Ser D:43 -Pro D:44
9Ala E:9 -Pro E:10
10Ser E:43 -Pro E:44
11Ala F:9 -Pro F:10
12Ser F:43 -Pro F:44
13Ala G:9 -Pro G:10
14Ser G:43 -Pro G:44
15Ala H:9 -Pro H:10
16Ser H:43 -Pro H:44
17Ala I:9 -Pro I:10
18Ser I:43 -Pro I:44
19Ala J:9 -Pro J:10
20Ser J:43 -Pro J:44
21Ala K:9 -Pro K:10
22Ser K:43 -Pro K:44
23Ala L:9 -Pro L:10
24Ser L:43 -Pro L:44

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4LZB)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4LZB)

(-) Exons   (0, 0)

(no "Exon" information available for 4LZB)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:218
                                                                                                                                                                                                                                                          
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eee......eee.hhhhhhhhhhhhhhhhhhhhhhh...ee.hhhhhhhhhhh......eeeee...................hhhhhhhhhhhhhhhh.....ee.hhhh..eeeee....ee......hhhhhhhhhhhhhhhhhh...eeeee......hhhhhhh...eeeee....hhhhhhhhhhhhhhhhhhhhhh.....hhhh.ee. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4lzb A   1 MNSVTVSHAPYTITYHNDWEPVMSQLVEFYNEVASWLLRDETSPIPDKFFIQLKQPLRNKRVCVCGIDPYPKDGTGVPFESPNFTKKSIKEIASSISRLTGVIDYKGYNLNIIDGVIPWNYYLSCKLGETKSHAIYWDKISKLLLQHITKHVSVLYCLGKTDFSNIRAKLESPVTTIVGYHPAARDRQFEKDRSFEIINVLLELDNKAPINWAQGFIY 218
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210        


Chain B from PDB  Type:PROTEIN  Length:219
                                                                                                                                                                                                                                                           
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeee......eeeehhhhhhhhhhhhhhhhhhhhhhhh..ee.hhhhhhhhhhh......eeeee...................hhhhhhhhhhhhhhhh.....ee.hhhh..eeeee....ee......hhhhhhhhhhhhhhhhhhhh.eeeee......hhhhhh....eeeee.......hhhhhhhhhhhhhhhhhhh.....hhhh.ee. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4lzb B   0 HMNSVTVSHAPYTITYHNDWEPVMSQLVEFYNEVASWLLRDETSPIPDKFFIQLKQPLRNKRVCVCGIDPYPKDGTGVPFESPNFTKKSIKEIASSISRLTGVIDYKGYNLNIIDGVIPWNYYLSCKLGETKSHAIYWDKISKLLLQHITKHVSVLYCLGKTDFSNIRAKLESPVTTIVGYHPAARDRQFEKDRSFEIINVLLELDNKAPINWAQGFIY 218
                                     9        19        29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209         


Chain C from PDB  Type:PROTEIN  Length:218
                                                                                                                                                                                                                                                          
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeee......eeeehhhhhhhhhhhhhhhhhhhhhhhh..ee.hhhhhhhhhhh......eeeee...................hhhhhhhhhhhhhhhh.....ee.hhhh..eeeee....ee......hhhhhhhhhhhhhhhhh....eeeee......hhhhhhh...eeeee........hhhhhhhhhhhhhhhhhh.....hhhh.ee. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4lzb C   1 MNSVTVSHAPYTITYHNDWEPVMSQLVEFYNEVASWLLRDETSPIPDKFFIQLKQPLRNKRVCVCGIDPYPKDGTGVPFESPNFTKKSIKEIASSISRLTGVIDYKGYNLNIIDGVIPWNYYLSCKLGETKSHAIYWDKISKLLLQHITKHVSVLYCLGKTDFSNIRAKLESPVTTIVGYHPAARDRQFEKDRSFEIINVLLELDNKAPINWAQGFIY 218
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210        


Chain D from PDB  Type:PROTEIN  Length:219
                                                                                                                                                                                                                                                           
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeee......eeeee.hhhhhhhhhhhhhhhhhhhhh...ee.hhhhhhhhhhh......eeeee...................hhhhhhhhhhhhhhhh.....ee.hhhh..eeeee....ee......hhhhhhhhhhhhhhhhhhhh.eeeee................eeeee....hhhhhhhhhhhhhhhhhhhhhh.....hhhh.ee. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4lzb D   0 HMNSVTVSHAPYTITYHNDWEPVMSQLVEFYNEVASWLLRDETSPIPDKFFIQLKQPLRNKRVCVCGIDPYPKDGTGVPFESPNFTKKSIKEIASSISRLTGVIDYKGYNLNIIDGVIPWNYYLSCKLGETKSHAIYWDKISKLLLQHITKHVSVLYCLGKTDFSNIRAKLESPVTTIVGYHPAARDRQFEKDRSFEIINVLLELDNKAPINWAQGFIY 218
                                     9        19        29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209         


Chain E from PDB  Type:PROTEIN  Length:216
                                                                                                                                                                                                                                                        
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .eeee......eeeehhhhhhhhhhhhhhhhhhhhhhhh..ee.hhhhhhhhhhh......eeeee...................hhhhhhhhhhhhhhhh.....ee.hhhh..eeeee....ee......hhhhhhhhhhhhhhhhhh...eeeee......hhhhhh....eeeee......hhhhhhhhhhhhhhhhhh.....hhhh.ee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 4lzb E   1 MNSVTVSHAPYTITYHNDWEPVMSQLVEFYNEVASWLLRDETSPIPDKFFIQLKQPLRNKRVCVCGIDPYPKDGTGVPFESPNFTKKSIKEIASSISRLTGVIDYKGYNLNIIDGVIPWNYYLSCKLGETKSHAIYWDKISKLLLQHITKHVSVLYCLGKTDFSNIRAKLESPVTTIVGYHPAARQFEKDRSFEIINVLLELDNKAPINWAQGFIY 218
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180   ||  192       202       212      
                                                                                                                                                                                                                 184|                               
                                                                                                                                                                                                                  187                               


Chain F from PDB  Type:PROTEIN  Length:218
                                                                                                                                                                                                                                                          
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeee......eeeehhhhhhhhhhhhhhhhhhhhhhhh..ee.hhhhhhhhhhh......eeeee...................hhhhhhhhhhhhhhhh.....ee.hhhh..eeeee....ee......hhhhhhhhhhhhhhhhhh...eeeee......hhhhhhh...eeeee....hhhhhhhhhhhhhhhhhhhhhh.....hhhh.ee. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4lzb F   1 MNSVTVSHAPYTITYHNDWEPVMSQLVEFYNEVASWLLRDETSPIPDKFFIQLKQPLRNKRVCVCGIDPYPKDGTGVPFESPNFTKKSIKEIASSISRLTGVIDYKGYNLNIIDGVIPWNYYLSCKLGETKSHAIYWDKISKLLLQHITKHVSVLYCLGKTDFSNIRAKLESPVTTIVGYHPAARDRQFEKDRSFEIINVLLELDNKAPINWAQGFIY 218
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210        


Chain G from PDB  Type:PROTEIN  Length:219
                                                                                                                                                                                                                                                           
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeee......eeeee.hhhhhhhhhhhhhhhhhhhhhh..ee.hhhhhhhhhhh......eeeee...................hhhhhhhhhhhhhhhh.....ee.hhhh..eeeee....ee......hhhhhhhhhhhhhhhhhh...eeeee......hhhhhhh...eeeee....hhhhhhhhhhhhhhhhhhhhhh.....hhhh.ee. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4lzb G   0 HMNSVTVSHAPYTITYHNDWEPVMSQLVEFYNEVASWLLRDETSPIPDKFFIQLKQPLRNKRVCVCGIDPYPKDGTGVPFESPNFTKKSIKEIASSISRLTGVIDYKGYNLNIIDGVIPWNYYLSCKLGETKSHAIYWDKISKLLLQHITKHVSVLYCLGKTDFSNIRAKLESPVTTIVGYHPAARDRQFEKDRSFEIINVLLELDNKAPINWAQGFIY 218
                                     9        19        29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209         


Chain H from PDB  Type:PROTEIN  Length:215
                                                                                                                                                                                                                                                       
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eee......eee.hhhhhhhhhhhhhhhhhhhhhhh...ee.hhhhhhhhhhh......eeeee...................hhhhhhhhhhhhhhhh.....ee.hhhh..eeeee....ee......hhhhhhhhhhhhhhhhh....eeeee......hhhhhh....eeeee.....hhhhhhhhhhhhhhhhhh.....hhhh.ee. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4lzb H   1 MNSVTVSHAPYTITYHNDWEPVMSQLVEFYNEVASWLLRDETSPIPDKFFIQLKQPLRNKRVCVCGIDPYPKDGTGVPFESPNFTKKSIKEIASSISRLTGVIDYKGYNLNIIDGVIPWNYYLSCKLGETKSHAIYWDKISKLLLQHITKHVSVLYCLGKTDFSNIRAKLESPVTTIVGYHPAAQFEKDRSFEIINVLLELDNKAPINWAQGFIY 218
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180   ||  193       203       213     
                                                                                                                                                                                                                 184|                              
                                                                                                                                                                                                                  188                              


Chain I from PDB  Type:PROTEIN  Length:214
                                                                                                                                                                                                                                                      
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeee......eeeehhhhhhhhhhhhhhhhhhhhhhh...ee.hhhhhhhhhhh......eeeee...................hhhhhhhhhhhhhhhh.....ee.hhhh..eeeee....ee......hhhhhhhhhhhhhhhhhhhh.eeeee......hhhhhh...eeeee.....hhhhhhhhhhhhhhhhhh.....hhhh.ee. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4lzb I   1 MNSVTVSHAPYTITYHNDWEPVMSQLVEFYNEVASWLLRDETSPIPDKFFIQLKQPLRNKRVCVCGIDPYPKDGTGVPFESPNFTKKSIKEIASSISRLTGVIDYKGYNLNIIDGVIPWNYYLSCKLGETKSHAIYWDKISKLLLQHITKHVSVLYCLGKTDFSNIRAKLSPVTTIVGYHPAAQFEKDRSFEIINVLLELDNKAPINWAQGFIY 218
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170|      181  ||   194       204       214    
                                                                                                                                                                                                   170|         184|                              
                                                                                                                                                                                                    172          188                              


Chain J from PDB  Type:PROTEIN  Length:217
                                                                                                                                                                                                                                                         
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeee......eeeehhhhhhhhhhhhhhhhhhhhhhh...ee.hhhhhhhhhhh......eeeee...................hhhhhhhhhhhhhhhh.....ee.hhhh..eeeee....ee......hhhhhhhhhhhhhhhhh....eeeee......hhhhhh....eeeee............hhhhhhhhhhhhh.....hhhh.ee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4lzb J   1 MNSVTVSHAPYTITYHNDWEPVMSQLVEFYNEVASWLLRDETSPIPDKFFIQLKQPLRNKRVCVCGIDPYPKDGTGVPFESPNFTKKSIKEIASSISRLTGVIDYKGYNLNIIDGVIPWNYYLSCKLGETKSHAIYWDKISKLLLQHITKHVSVLYCLGKTDFSNIRAKLESPVTTIVGYHPAARDQFEKDRSFEIINVLLELDNKAPINWAQGFIY 218
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180     ||191       201       211       
                                                                                                                                                                                                                   186|                              
                                                                                                                                                                                                                    188                              


Chain K from PDB  Type:PROTEIN  Length:217
                                                                                                                                                                                                                                                         
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeee......eeeehhhhhhhhhhhhhhhhhhhhhhhh..ee.hhhhhhhhhhh......eeeee...................hhhhhhhhhhhhhhhh.....ee.hhhh..eeeee....ee......hhhhhhhhhhhhhhhhhh...eeeee......hhhhhhh...eeeee............hhhhhhhhhhhhh.....hhhh.ee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4lzb K   1 MNSVTVSHAPYTITYHNDWEPVMSQLVEFYNEVASWLLRDETSPIPDKFFIQLKQPLRNKRVCVCGIDPYPKDGTGVPFESPNFTKKSIKEIASSISRLTGVIDYKGYNLNIIDGVIPWNYYLSCKLGETKSHAIYWDKISKLLLQHITKHVSVLYCLGKTDFSNIRAKLESPVTTIVGYHPAADRQFEKDRSFEIINVLLELDNKAPINWAQGFIY 218
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180   ||  191       201       211       
                                                                                                                                                                                                                 184|                                
                                                                                                                                                                                                                  186                                


Chain L from PDB  Type:PROTEIN  Length:214
                                                                                                                                                                                                                                                      
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeee......eeeehhhhhhhhhhhhhhhhhhhhhhh...ee.hhhhhhhhhhh......eeeee...................hhhhhhhhhhhhhhhh.....ee.hhhh..eeeee....ee......hhhhhhhhhhhhhhhhhh...eeeee......hhhhhh....eeeee.........hhhhhhhhhhhhh.....hhhh.ee. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4lzb L   1 MNSVTVSHAPYTITYHNDWEPVMSQLVEFYNEVASWLLRDETSPIPDKFFIQLKQPLRNKRVCVCGIDPYPKDGTGVPFESPNFTKKSIKEIASSISRLTGVIDYKGYNLNIIDGVIPWNYYLSCKLGETKSHAIYWDKISKLLLQHITKHVSVLYCLGKTDFSNIRAKLESPVTTIVGYHPAQFEKDRSFEIINVLLELDNKAPINWAQGFIY 218
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180  ||   194       204       214    
                                                                                                                                                                                                                183|                              
                                                                                                                                                                                                                 188
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

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(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4LZB)

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(no "CATH Domain" information available for 4LZB)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4LZB)

(-) Gene Ontology  (7, 7)

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        UNG_VACCA | Q91UM2: 2owq 3nt7 4dof 4dog 4irb 4qc9 4qca 5jx3

(-) Related Entries Specified in the PDB File

4dof URACIL DNA GLYCOSYLASE WITHOUT URACIL IN SPACE GROUP (P 21 21 21) WITH SMALLER UNIT CELL