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(-) Description

Title :  STRUCTURE OF CIAP1-BIR3 AND INHIBITOR
 
Authors :  X. Li, J. Wang, S. M. Condon, Y. Shi
Date :  08 May 13  (Deposition) - 14 May 14  (Release) - 14 May 14  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.52
Chains :  Asym./Biol. Unit :  A
Keywords :  Apoptosis, Ciap1-Bir3, Ligase-Ligase Inhibitor Complex (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  X. Li, J. Wang, S. M. Condon, Y. Shi
Structure Of Ciap1-Bir3 And Inhibitor
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - BACULOVIRAL IAP REPEAT-CONTAINING PROTEIN 2
    ChainsA
    EC Number6.3.2.-
    EngineeredYES
    Expression SystemESCHERICHIA COLI
    Expression System PlasmidPET15B
    Expression System StrainBL21(DE3)
    Expression System Taxid562
    Expression System Vector TypePLASMID
    FragmentUNP RESIDUES 260-357
    GeneBIRC2, API1, IAP2, MIHB, RNF48
    Organism CommonHUMAN
    Organism ScientificHOMO SAPIENS
    Organism Taxid9606
    SynonymC-IAP1, IAP HOMOLOG B, INHIBITOR OF APOPTOSIS PROTEIN 2, IAP-2, HIAP-2, HIAP2, RING FINGER PROTEIN 48, TNFR2-TRAF-SIGNALING COMPLEX PROTEIN 2

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (3, 3)

Asymmetric/Biological Unit (3, 3)
No.NameCountTypeFull Name
14361Ligand/Ion(2S)-N-{(2R)-1-[(2R,4S)-2-{[6,6'-DIFLUORO-3'-({(2R,4S)-4-HYDROXY-1-[(2S)-2-{[(2S)-2-(METHYLAMINO)PROPANOYL]AMINO}BUTANOYL]PYRROLIDIN-2-YL}METHYL)-1H,1'H-2,2'-BIINDOL-3-YL]METHYL}-4-HYDROXYPYRROLIDIN-1-YL]-1-OXOBUTAN-2-YL}-2-(METHYLAMINO)PROPANAMIDE
2PO41Ligand/IonPHOSPHATE ION
3ZN1Ligand/IonZINC ION

(-) Sites  (3, 3)

Asymmetric Unit (3, 3)
No.NameEvidenceResiduesDescription
1AC1SOFTWARECYS A:300 , CYS A:303 , HIS A:320 , CYS A:327BINDING SITE FOR RESIDUE ZN A 501
2AC2SOFTWAREARG A:294 , LYS A:299 , GLY A:306 , LEU A:307 , ARG A:308 , CYS A:309 , ASP A:314 , GLU A:319 , LYS A:322 , TRP A:323 , PHE A:324 , PO4 A:503 , HOH A:686 , HOH A:714BINDING SITE FOR RESIDUE 436 A 502
3AC3SOFTWAREARG A:294 , LYS A:299 , 436 A:502 , HOH A:674 , HOH A:680BINDING SITE FOR RESIDUE PO4 A 503

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4KMN)

(-) Cis Peptide Bonds  (1, 1)

Asymmetric/Biological Unit
No.Residues
1Tyr A:346 -Pro A:347

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4KMN)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4KMN)

(-) Exons   (0, 0)

(no "Exon" information available for 4KMN)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
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Chain A from PDB  Type:PROTEIN  Length:103
                                                                                                                                       
               SCOP domains ------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......hhhhhhhhhhhhhhhhh......hhhhhhhh.eee......eee.....ee.......hhhhhhhhhh..hhhhhhhhhhhhhhhhhhhh....... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------- Transcript
                 4kmn A 251 AAASISNLSMQTHAARMRTFMYWPSSVPVQPEQLASAGFYYVGRNDDVKCFCCDGGLRCWESGDDPWVEHAKWFPRCEFLIRMKGQEFVDEIQGRYPHLLEAA 353
                                   260       270       280       290       300       310       320       330       340       350   

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  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4KMN)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4KMN)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4KMN)

(-) Gene Ontology  (60, 60)

Asymmetric/Biological Unit(hide GO term definitions)

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        BIRC2_HUMAN | Q134901qbh 2l9m 3d9t 3d9u 3m1d 3mup 3oz1 3t6p 3uw4 4eb9 4hy4 4hy5 4lge 4lgu 4mti 4mu7 5m6n

(-) Related Entries Specified in the PDB File

4kmp