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(-) Description

Title :  CRYSTAL STRUCTURE OF F37A MUTANT OF BORNA DISEASE VIRUS MATRIX PROTEIN
 
Authors :  P. Dautel, P. Kolenko, M. T. Stubbs
Date :  11 Oct 12  (Deposition) - 30 Oct 13  (Release) - 30 Oct 13  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  3.60
Chains :  Asym. Unit :  A
Biol. Unit 1:  A  (4x)
Keywords :  Viral Matrix Protein, Rna Binding, Membrane Binding, Viruses, Ssrna Negative-Strand Viruses, Mononegavirales, Bornaviridae, Bornavirus, Virion, Viral Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  P. Dautel, P. Kolenko, M. T. Stubbs
Matrix Protein Variants Provide Support For Alternative Borna Disease Virus Infection Pathway
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - MATRIX PROTEIN
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PMAL-C2
    Expression System Strain: BL21
    Expression System Taxid: 511693
    Expression System Vector Type: PLASMID
    Gene: M
    Mutation: YES
    Organism Common: BDV
    Organism Scientific: BORNA DISEASE VIRUS
    Organism Taxid: 12455
    Synonym: GP18, P16

 Structural Features

(-) Chains, Units

  1
Asymmetric Unit : A
Biological Unit 1 (4x): A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 1)

Asymmetric Unit (1, 1)
No.NameCountTypeFull Name
1C5P1Ligand/IonCYTIDINE-5'-MONOPHOSPHATE
Biological Unit 1 (1, 4)
No.NameCountTypeFull Name
1C5P4Ligand/IonCYTIDINE-5'-MONOPHOSPHATE

(-) Sites  (1, 1)

Asymmetric Unit (1, 1)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREGLN A:36 , ALA A:37 , LEU A:38 , LYS A:111 , HIS A:112 , ASN A:115BINDING SITE FOR RESIDUE C5P A 201

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4HI5)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 4HI5)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4HI5)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4HI5)

(-) Exons   (0, 0)

(no "Exon" information available for 4HI5)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
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(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:135
                                                                                                                                                                       
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....ee.hhhhh.....eeeeeee....eeeeeeee...........hhhh.eeeeeee.....eeeeeeehhhhhhhhhhhh........eeeee.hhhhhhhhhhh.....eeeeeee....hhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4hi5 A   3 SKHSYVELKDKVIVPGWPTLMLEIDFVNQALNIPFLSVKEPLQLPREKKLTDYFTIDVEPAGHSLVNIYFQIDDFLLLTLNSLSVYKDPIRKYMFLRLNKEQSKHAINAAFNVFSYRLRNIGVGPLGPDIRSSGP 142
                                    12        22      ||37        47        57        67        77        87        97       107       117       127       137     
                                                     29|                                                                                                           
                                                      35
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 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4HI5)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4HI5)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4HI5)

(-) Gene Ontology  (3, 3)

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        MATRX_BDV1 | P0C794: 3f1j 4hi6 4hit 4hiu 4hiw 4hiy

(-) Related Entries Specified in the PDB File

3f1j 4hi6 4hit 4hiu 4hiw 4hiy