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(-) Description

Title :  CRYSTAL STRUCTURE OF THE C707S MUTANT OF C-TERMINAL DOMAIN OF 10'FORMYLTETRAHYDROFOLATE DEHYDROGENASE IN COMPLEX WITH NADP
 
Authors :  Y. Tsybovsky
Date :  17 Aug 12  (Deposition) - 23 Jan 13  (Release) - 22 May 13  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.30
Chains :  Asym./Biol. Unit :  A,B,C,D
Keywords :  Aldehyde Dehydrogenase, Fdh, Oxidoreductase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  Y. Tsybovsky, Y. Malakhau, K. C. Strickland, S. A. Krupenko
The Mechanism Of Discrimination Between Oxidized And Reduce Coenzyme In The Aldehyde Dehydrogenase Domain Of Aldh1L1.
Chem. Biol. Interact V. 202 62 2013
PubMed-ID: 23295222  |  Reference-DOI: 10.1016/J.CBI.2012.12.015

(-) Compounds

Molecule 1 - CYTOSOLIC 10-FORMYLTETRAHYDROFOLATE DEHYDROGENASE
    Chains: A, B, C, D
    EC Number: 1.5.1.6
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Fragment: C-TERMINAL DOMAIN, RESIDUES 397-902
    Gene: ALDH1L1, FTHFD
    Mutation: YES
    Organism Common: BROWN RAT,RAT,RATS
    Organism Scientific: RATTUS NORVEGICUS
    Organism Taxid: 10116
    Synonym: 10-FTHFDH, FDH, ALDEHYDE DEHYDROGENASE FAMILY 1 MEMBER L1, FBP-CI

 Structural Features

(-) Chains, Units

  1234
Asymmetric/Biological Unit : ABCD

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (3, 36)

Asymmetric/Biological Unit (3, 36)
No.NameCountTypeFull Name
1GOL4Ligand/IonGLYCEROL
2NAP4Ligand/IonNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
3SO428Ligand/IonSULFATE ION

(-) Sites  (36, 36)

Asymmetric Unit (36, 36)
No.NameEvidenceResiduesDescription
01AC1SOFTWAREVAL A:570 , ILE A:571 , PRO A:572 , TRP A:573 , ASN A:574 , LYS A:597 , ALA A:599 , GLN A:600 , SER A:629 , GLY A:630 , GLY A:634 , GLN A:635 , PHE A:648 , THR A:649 , GLY A:650 , SER A:651 , VAL A:654 , HIS A:657 , ILE A:658 , GLU A:673 , LEU A:674 , GLY A:675 , SER A:707 , GLU A:804 , PHE A:806 , LEU A:834 , PHE A:872 , HOH A:1143 , HOH A:1160 , HOH A:1179 , HOH A:1225 , HOH A:1251 , HOH A:1295 , HOH A:1303 , HOH A:1323BINDING SITE FOR RESIDUE NAP A 1001
02AC2SOFTWARELYS A:852 , ARG C:554BINDING SITE FOR RESIDUE SO4 A 1002
03AC3SOFTWAREARG A:554 , LYS C:852BINDING SITE FOR RESIDUE SO4 A 1003
04AC4SOFTWAREARG A:636 , PRO A:641BINDING SITE FOR RESIDUE SO4 A 1004
05AC5SOFTWAREARG A:764 , TYR A:799BINDING SITE FOR RESIDUE SO4 A 1005
06AC6SOFTWAREARG A:551 , ARG A:554 , TYR C:848BINDING SITE FOR RESIDUE SO4 A 1006
07AC7SOFTWAREASN A:548 , HOH A:1292 , GLN B:528BINDING SITE FOR RESIDUE SO4 A 1007
08AC8SOFTWARELYS A:520 , GLN A:528 , ASN B:548 , HOH B:1246BINDING SITE FOR RESIDUE SO4 A 1008
09AC9SOFTWAREASN A:738 , GLU A:741 , ARG A:781BINDING SITE FOR RESIDUE SO4 A 1009
10BC1SOFTWAREGLY A:881 , LYS A:882 , HOH A:1102 , HOH A:1318 , LYS B:669 , ARG B:894 , ILE B:895 , HOH B:1230BINDING SITE FOR RESIDUE SO4 A 1010
11BC2SOFTWARELYS A:669 , LEU A:893 , ARG A:894 , ILE A:895 , HOH A:1202 , HOH A:1293 , HOH A:1342 , GLY B:881 , LYS B:882 , HOH B:1102BINDING SITE FOR RESIDUE SO4 A 1011
12BC3SOFTWARETYR A:575 , TRP A:582 , ASN A:706 , ASN A:864 , THR A:866 , HOH A:1373BINDING SITE FOR RESIDUE GOL A 1012
13BC4SOFTWAREVAL B:570 , ILE B:571 , PRO B:572 , TRP B:573 , ASN B:574 , LYS B:597 , ALA B:599 , GLN B:600 , SER B:629 , GLY B:630 , GLY B:634 , GLN B:635 , PHE B:648 , THR B:649 , GLY B:650 , SER B:651 , VAL B:654 , HIS B:657 , GLU B:673 , LEU B:674 , GLY B:675 , SER B:707 , GLU B:804 , PHE B:806 , LEU B:834 , PHE B:872 , HOH B:1132 , HOH B:1142 , HOH B:1148 , HOH B:1155 , HOH B:1186 , HOH B:1197 , HOH B:1237 , HOH B:1239 , HOH B:1299 , HOH B:1309BINDING SITE FOR RESIDUE NAP B 1001
14BC5SOFTWAREARG B:554 , HOH B:1236 , LYS D:852BINDING SITE FOR RESIDUE SO4 B 1002
15BC6SOFTWAREASP B:851 , LYS B:852 , HOH B:1206 , ARG D:554BINDING SITE FOR RESIDUE SO4 B 1003
16BC7SOFTWAREARG B:636 , PRO B:641BINDING SITE FOR RESIDUE SO4 B 1004
17BC8SOFTWAREARG B:764BINDING SITE FOR RESIDUE SO4 B 1005
18BC9SOFTWAREARG B:551 , ARG B:554 , HOH B:1327 , TYR D:848BINDING SITE FOR RESIDUE SO4 B 1006
19CC1SOFTWAREASN B:738 , GLU B:741 , ARG B:781 , HOH B:1130 , HOH B:1288BINDING SITE FOR RESIDUE SO4 B 1007
20CC2SOFTWARETYR B:575 , ASN B:706 , ASN B:864 , THR B:866 , HOH B:1345BINDING SITE FOR RESIDUE GOL B 1008
21CC3SOFTWAREVAL C:570 , ILE C:571 , PRO C:572 , TRP C:573 , ASN C:574 , LYS C:597 , ALA C:599 , GLN C:600 , SER C:629 , GLY C:630 , GLY C:634 , GLN C:635 , PHE C:648 , THR C:649 , GLY C:650 , SER C:651 , VAL C:654 , HIS C:657 , ILE C:658 , GLU C:673 , LEU C:674 , GLY C:675 , SER C:707 , GLU C:804 , PHE C:806 , LEU C:834 , PHE C:872 , HOH C:1168 , HOH C:1192 , HOH C:1223 , HOH C:1226 , HOH C:1229 , HOH C:1243 , HOH C:1247 , HOH C:1253 , HOH C:1291 , HOH C:1351BINDING SITE FOR RESIDUE NAP C 1001
22CC4SOFTWAREARG C:636 , PRO C:641BINDING SITE FOR RESIDUE SO4 C 1002
23CC5SOFTWAREARG C:764BINDING SITE FOR RESIDUE SO4 C 1003
24CC6SOFTWAREARG C:551 , ARG C:554 , HOH C:1337BINDING SITE FOR RESIDUE SO4 C 1004
25CC7SOFTWAREASN C:738 , ARG C:781 , HOH C:1218BINDING SITE FOR RESIDUE SO4 C 1005
26CC8SOFTWARELYS C:669 , ARG C:894 , ILE C:895 , HOH C:1173 , HOH C:1271 , HOH C:1281 , GLY D:881 , LYS D:882BINDING SITE FOR RESIDUE SO4 C 1006
27CC9SOFTWARELEU A:416 , THR A:417 , LYS C:415 , ARG C:742BINDING SITE FOR RESIDUE SO4 C 1007
28DC1SOFTWARETYR C:575 , TRP C:582 , ASN C:706 , ASN C:864 , THR C:866 , HOH C:1389BINDING SITE FOR RESIDUE GOL C 1008
29DC2SOFTWAREVAL D:570 , ILE D:571 , PRO D:572 , TRP D:573 , ASN D:574 , LYS D:597 , ALA D:599 , GLN D:600 , SER D:629 , GLY D:630 , GLY D:634 , GLN D:635 , PHE D:648 , THR D:649 , GLY D:650 , SER D:651 , VAL D:654 , HIS D:657 , ILE D:658 , GLU D:673 , LEU D:674 , GLY D:675 , SER D:707 , GLU D:804 , PHE D:806 , LEU D:834 , PHE D:872 , HOH D:1138 , HOH D:1141 , HOH D:1146 , HOH D:1161 , HOH D:1236 , HOH D:1247 , HOH D:1267 , HOH D:1269 , HOH D:1328 , HOH D:1333BINDING SITE FOR RESIDUE NAP D 1001
30DC3SOFTWAREARG D:636 , PRO D:641 , HOH D:1287BINDING SITE FOR RESIDUE SO4 D 1002
31DC4SOFTWAREARG D:764BINDING SITE FOR RESIDUE SO4 D 1003
32DC5SOFTWARETYR B:848 , ARG D:551 , ARG D:554BINDING SITE FOR RESIDUE SO4 D 1004
33DC6SOFTWAREASN C:548 , LYS D:520 , GLN D:528 , HOH D:1184BINDING SITE FOR RESIDUE SO4 D 1005
34DC7SOFTWAREASN D:738 , ARG D:781BINDING SITE FOR RESIDUE SO4 D 1006
35DC8SOFTWAREGLY C:881 , LYS C:882 , LYS D:669 , LEU D:893 , ARG D:894 , ILE D:895 , HOH D:1114 , HOH D:1209 , HOH D:1222 , HOH D:1272BINDING SITE FOR RESIDUE SO4 D 1007
36DC9SOFTWARETYR D:575 , TRP D:582 , ASN D:706 , ASN D:864 , THR D:866BINDING SITE FOR RESIDUE GOL D 1008

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4GNZ)

(-) Cis Peptide Bonds  (4, 4)

Asymmetric/Biological Unit
No.Residues
1Arg A:551 -Pro A:552
2Arg B:551 -Pro B:552
3Arg C:551 -Pro C:552
4Arg D:551 -Pro D:552

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4GNZ)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4GNZ)

(-) Exons   (0, 0)

(no "Exon" information available for 4GNZ)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:498
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  
               SCOP domains d4gnza_ A: automated matches                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ....eeeee..eeeee...eee..eee.hhhh.eeeee......eeeeee..hhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhh.hhhhhhhhhhhhhhhhhh.eeee........eeeeeeeeee..eeeee....hhhhhhhhhhhhhhhh..eeeee.....hhhhhhhhhhhhhh......eee......hhhhhhhhh....eeeee.hhhhhhhhhhhhhhh...eeeee....eeeee....hhhhhhhhhhhhhhhhhhh....eeeeeeehhhhhhhhhhhhhhhh..................hhhhhhhhhhhhhhhhhh..eeee..............eeee.....hhhhhh.....eeeeeee....hhhhhhhhhh.......eee..hhhhhhhhhhhh...eeee..............hhh.ee....hhhhhhh.eeeeeeeeee Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 4gnz A 405 VINYVEKAVNKLTLQMPYQLFIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKEAFENGLWGKINARDRGRLLYRLADVMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGATIPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCALSNVKKVSLELGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENSIAAGRLFVEESIHNQFVQKVVEEVEKMKIGNPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVPRPGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFGLASGVFTRDINKALYVSDKLQAGTVFINTYNKTDVAAPFGGFKQSGFGKDLGEAALNEYLRIKTVTFEY 902
                                   414       424       434       444       454       464       474       484       494       504       514       524       534       544       554       564       574       584       594       604       614       624       634       644       654       664       674       684       694       704       714       724       734       744       754       764       774       784       794       804       814       824       834       844       854       864       874       884       894        


Chain B from PDB  Type:PROTEIN  Length:498
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  
               SCOP domains d4gnzb_ B: automated matches                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ....eeeee..eeeee...eee..eee.hhhh.eeeee......eeeeee..hhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhh.hhhhhhhhhhhhhhhhhh.eeee........eeeeeeeeee..eeeee....hhhhhhhhhhhhhhhh..eeeee.....hhhhhhhhhhhhhhh.....eee......hhhhhhhhh....eeeee.hhhhhhhhhhhhhhh...eeeee....eeeee....hhhhhhhhhhhhhhhhhhh....eeeeeeehhhhhhhhhhhhhhhhh.................hhhhhhhhhhhhhhhhhh..eeee..............eeee.....hhhhhh.....eeeeeee...hhhhhhhhhhh.......eee..hhhhhhhhhhhh...eeee..............hhh.ee...hhhhhhh..eeeeeeeeee Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 4gnz B 405 VINYVEKAVNKLTLQMPYQLFIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKEAFENGLWGKINARDRGRLLYRLADVMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGATIPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCALSNVKKVSLELGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENSIAAGRLFVEESIHNQFVQKVVEEVEKMKIGNPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVPRPGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFGLASGVFTRDINKALYVSDKLQAGTVFINTYNKTDVAAPFGGFKQSGFGKDLGEAALNEYLRIKTVTFEY 902
                                   414       424       434       444       454       464       474       484       494       504       514       524       534       544       554       564       574       584       594       604       614       624       634       644       654       664       674       684       694       704       714       724       734       744       754       764       774       784       794       804       814       824       834       844       854       864       874       884       894        


Chain C from PDB  Type:PROTEIN  Length:498
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  
               SCOP domains d4gnzc_ C: automated matches                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ....eeeee..eeeee...eee..eee.hhhh.eeeee......eeeeee..hhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhh.hhhhhhhhhhhhhhhhhh.eeee........eeeeeeeeee..eeeee....hhhhhhhhhhhhhhhh..eeeee.....hhhhhhhhhhhhhhh.....eee......hhhhhhhhh....eeeee.hhhhhhhhhhhhhhh...eeeee....eeeee....hhhhhhhhhhhhhhhhhhh....eeeeeeehhhhhhhhhhhhhhhhh.................hhhhhhhhhhhhhhhhhh..eeee..............eeee.....hhhhh......eeeeeee....hhhhhhhhhh.......eee..hhhhhhhhhhhh...eeee..............hhh.ee...hhhhhh...eeeeeeeeee Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 4gnz C 405 VINYVEKAVNKLTLQMPYQLFIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKEAFENGLWGKINARDRGRLLYRLADVMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGATIPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCALSNVKKVSLELGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENSIAAGRLFVEESIHNQFVQKVVEEVEKMKIGNPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVPRPGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFGLASGVFTRDINKALYVSDKLQAGTVFINTYNKTDVAAPFGGFKQSGFGKDLGEAALNEYLRIKTVTFEY 902
                                   414       424       434       444       454       464       474       484       494       504       514       524       534       544       554       564       574       584       594       604       614       624       634       644       654       664       674       684       694       704       714       724       734       744       754       764       774       784       794       804       814       824       834       844       854       864       874       884       894        


Chain D from PDB  Type:PROTEIN  Length:498
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  
               SCOP domains d4gnzd_ D: automated matches                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ....eeeee..eeeee...eee..eee.hhhh.eeeee......eeeeee..hhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhh.hhhhhhhhhhhhhhhhhh.eeee........eeeeeeeeee..eeeee....hhhhhhhhhhhhhhhh..eeeee.....hhhhhhhhhhhhhhh.....eee......hhhhhhhhh....eeeee.hhhhhhhhhhhhhhh...eeeee....eeeee....hhhhhhhhhhhhhhhhhhh....eeeeeeehhhhhhhhhhhhhhhhh.................hhhhhhhhhhhhhhhhhh..eeee..............eeee.....hhhhhh.....eeeeeee....hhhhhhhhhh.......eee..hhhhhhhhhhhh...eeee..............hhh.ee....hhhhhh..eeeeeeeeee Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 4gnz D 405 VINYVEKAVNKLTLQMPYQLFIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKEAFENGLWGKINARDRGRLLYRLADVMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGATIPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCALSNVKKVSLELGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENSIAAGRLFVEESIHNQFVQKVVEEVEKMKIGNPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVPRPGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFGLASGVFTRDINKALYVSDKLQAGTVFINTYNKTDVAAPFGGFKQSGFGKDLGEAALNEYLRIKTVTFEY 902
                                   414       424       434       444       454       464       474       484       494       504       514       524       534       544       554       564       574       584       594       604       614       624       634       644       654       664       674       684       694       704       714       724       734       744       754       764       774       784       794       804       814       824       834       844       854       864       874       884       894
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 4)

Asymmetric/Biological Unit
(-)
Class: Alpha and beta proteins (a/b) (23833)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4GNZ)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4GNZ)

(-) Gene Ontology  (19, 19)

Asymmetric/Biological Unit(hide GO term definitions)

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  Cis Peptide Bonds
    Arg A:551 - Pro A:552   [ RasMol ]  
    Arg B:551 - Pro B:552   [ RasMol ]  
    Arg C:551 - Pro C:552   [ RasMol ]  
    Arg D:551 - Pro D:552   [ RasMol ]  
 

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  AL1L1_RAT | P28037
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  1.5.1.6
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  AL1L1_RAT | P28037
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        AL1L1_RAT | P28037: 1s3i 2o2p 2o2q 2o2r 3rhj 3rhl 3rhm 3rho 3rhp 3rhq 3rhr 4go0 4go2

(-) Related Entries Specified in the PDB File

4go0 4go2