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(-) Description

Title :  CRYSTAL STRUCTURE OF EQUINE SERUM ALBUMIN AT 2.04 RESOLUTION
 
Authors :  A. Bujacz, G. Bujacz
Date :  13 May 12  (Deposition) - 03 Oct 12  (Release) - 03 Oct 12  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.04
Chains :  Asym./Biol. Unit :  A
Keywords :  Equine Serum Albumin, Helical Protein, Transport Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  A. Bujacz
Structures Of Bovine, Equine And Leporine Serum Albumin.
Acta Crystallogr. , Sect. D V. 68 1278 2012
PubMed-ID: 22993082  |  Reference-DOI: 10.1107/S0907444912027047

(-) Compounds

Molecule 1 - SERUM ALBUMIN
    Chains: A
    Fragment: UNP RESIDUES 25-607
    Organism Common: DOMESTIC HORSE,EQUINE
    Organism Scientific: EQUUS CABALLUS
    Organism Taxid: 9796

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (3, 8)

Asymmetric/Biological Unit (3, 8)
No.NameCountTypeFull Name
1LMR1Ligand/Ion(2S)-2-HYDROXYBUTANEDIOIC ACID
2MLI6Ligand/IonMALONATE ION
3SIN1Ligand/IonSUCCINIC ACID

(-) Sites  (8, 8)

Asymmetric Unit (8, 8)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREGLU A:6 , LEU A:66 , HIS A:67 , PHE A:70 , GLY A:247 , ASP A:248 , LEU A:249 , LEU A:250 , GLU A:251BINDING SITE FOR RESIDUE MLI A 601
2AC2SOFTWAREPHE A:501 , HIS A:534 , LYS A:535 , GLN A:579 , HOH A:874 , HOH A:1011BINDING SITE FOR RESIDUE MLI A 602
3AC3SOFTWARELEU A:386 , ASN A:390 , LEU A:406 , ARG A:409 , TYR A:410 , LEU A:452 , SER A:488BINDING SITE FOR RESIDUE MLI A 603
4AC4SOFTWARELEU A:14 , HIS A:18 , PRO A:151 , ALA A:253 , ARG A:256 , ALA A:257 , LEU A:282 , LEU A:283 , SER A:286BINDING SITE FOR RESIDUE MLI A 604
5AC5SOFTWARELYS A:194 , TRP A:213 , ARG A:217 , HIS A:451 , LMR A:608 , HOH A:735 , HOH A:736 , HOH A:738BINDING SITE FOR RESIDUE MLI A 605
6AC6SOFTWARELEU A:197 , SER A:201 , ALA A:209 , TRP A:213 , LEU A:346 , LEU A:480 , HOH A:743 , HOH A:747 , HOH A:805 , HOH A:882 , HOH A:913BINDING SITE FOR RESIDUE MLI A 606
7AC7SOFTWARETYR A:149 , LEU A:237 , ARG A:256 , ILE A:263 , SER A:286 , ILE A:289 , ALA A:290 , HOH A:737 , HOH A:742 , HOH A:871BINDING SITE FOR RESIDUE SIN A 607
8AC8SOFTWARELYS A:194 , LYS A:198 , TRP A:213 , SER A:214 , ARG A:217 , LYS A:221 , LEU A:237 , ALA A:290 , MLI A:605 , HOH A:723 , HOH A:736 , HOH A:742 , HOH A:986BINDING SITE FOR RESIDUE LMR A 608

(-) SS Bonds  (17, 17)

Asymmetric/Biological Unit
No.Residues
1A:53 -A:62
2A:75 -A:91
3A:90 -A:101
4A:123 -A:168
5A:167 -A:176
6A:199 -A:245
7A:244 -A:252
8A:264 -A:278
9A:277 -A:288
10A:315 -A:360
11A:359 -A:368
12A:391 -A:437
13A:436 -A:447
14A:460 -A:476
15A:475 -A:486
16A:513 -A:558
17A:557 -A:566

(-) Cis Peptide Bonds  (1, 1)

Asymmetric/Biological Unit
No.Residues
1Glu A:95 -Pro A:96

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4F5U)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4F5U)

(-) Exons   (0, 0)

(no "Exon" information available for 4F5U)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:583
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
               SCOP domains d4f5ua1 A:1-195 automated matches                                                                                                                                                                  d4f5ua2 A:196-387 automated matches                                                                                                                                                             d4f5ua3 A:388-583 automated matches                                                                                                                                                                  SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....hhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhh........hhhhhhhhhhh...hhhhhhhhhhhhhhh..hhhhhhhhhhh...........hhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhh...........hhhhhh...hhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhh...........hhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4f5u A   1 DTHKSEIAHRFNDLGEKHFKGLVLVAFSQYLQQCPFEDHVKLVNEVTEFAKKCAADESAENCDKSLHTLFGDKLCTVATLRATYGELADCCEKQEPERNECFLTHKDDHPNLPKLKPEPDAQCAAFQEDPDKFLGKYLYEVARRHPYFYGPELLFHAEEYKADFTECCPADDKLACLIPKLDALKERILLSSAKERLKCSSFQNFGERAVKAWSVARLSQKFPKADFAEVSKIVTDLTKVHKECCHGDLLECADDRADLAKYICEHQDSISGKLKACCDKPLLQKSHCIAEVKEDDLPSDLPALAADFAEDKEICKHYKDAKDVFLGTFLYEYSRRHPDYSVSLLLRIAKTYEATLEKCCAEADPPACYRTVFDQFTPLVEEPKSLVKKNCDLFEEVGEYDFQNALIVRYTKKAPQVSTPTLVEIGRTLGKVGSRCCKLPESERLPCSENHLALALNRLCVLHEKTPVSEKITKCCTDSLAERRPCFSALELDEGYVPKEFKAETFTFHADICTLPEDEKQIKKQSALAELVKHKPKATKEQLKTVLGNFSAFVAKCCGREDKEACFAEEGPKLVASSQLALA 583
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530       540       550       560       570       580
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 3)

Asymmetric/Biological Unit
(-)
Class: All alpha proteins (14657)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4F5U)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4F5U)

(-) Gene Ontology  (16, 16)

Asymmetric/Biological Unit(hide GO term definitions)

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  Cis Peptide Bonds
    Glu A:95 - Pro A:96   [ RasMol ]  
 

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  ALBU_HORSE | P35747
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        ALBU_HORSE | P35747: 3v08 4f5t 4j2v 4ot2 4zbq 4zbr 5dby 5dqf 5hoz 5id9 5iih 5iiu 5iix 5ij5 5ije 5v0v

(-) Related Entries Specified in the PDB File

4f5s
4f5t STRUCTURE OF THE SAME ALBUMIN OBTAINED FROM CRYSTAL CRYSTALLIZED FROM DIFFERENT CONDITIONS.
4f5v