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(-) Description

Title :  CRYSTAL STRUCTURE OF MOUSE CATENIN BETA-59 IN 4.0M UREA
 
Authors :  C. Wang, G. Y. Zhang
Date :  26 Apr 12  (Deposition) - 01 May 13  (Release) - 08 Oct 14  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.10
Chains :  Asym./Biol. Unit :  A
Keywords :  Mouse Catenin, Urea, Cell Adhesion (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  C. Wang, G. Y. Zhang
Crystal Structure Of Mouse Catenin Beta-59 In 4. 0M Urea
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - CATENIN BETA-1
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Strain: ROSETTA2
    Expression System Taxid: 562
    Fragment: UNP RESIDUES 134-671
    Gene: CTNNB1, CATNB
    Organism Common: MOUSE
    Organism Scientific: MUS MUSCULUS
    Organism Taxid: 10090
    Synonym: BETA-CATENIN

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 42)

Asymmetric/Biological Unit (1, 42)
No.NameCountTypeFull Name
1URE42Ligand/IonUREA

(-) Sites  (42, 42)

Asymmetric Unit (42, 42)
No.NameEvidenceResiduesDescription
01AC1SOFTWARETHR A:330 , TYR A:331 , HOH A:811BINDING SITE FOR RESIDUE URE A 701
02AC2SOFTWARETHR A:332 , GLU A:334 , ASP A:372 , URE A:720 , HOH A:827BINDING SITE FOR RESIDUE URE A 702
03AC3SOFTWAREARG A:474 , LEU A:644 , HIS A:645 , SER A:646 , ALA A:652BINDING SITE FOR RESIDUE URE A 703
04AC4SOFTWARELEU A:286 , LYS A:288 , TYR A:331 , HOH A:810BINDING SITE FOR RESIDUE URE A 704
05AC5SOFTWARETHR A:289 , ASN A:290 , VAL A:291 , THR A:330 , THR A:332 , URE A:719 , URE A:742 , HOH A:865BINDING SITE FOR RESIDUE URE A 705
06AC6SOFTWAREVAL A:358 , GLU A:359 , GLY A:361 , GLN A:364 , GLN A:395 , HOH A:887 , HOH A:1010BINDING SITE FOR RESIDUE URE A 706
07AC7SOFTWAREASN A:430 , LYS A:435 , HIS A:470 , SER A:473 , ARG A:474 , URE A:718 , HOH A:853 , HOH A:1016BINDING SITE FOR RESIDUE URE A 707
08AC8SOFTWAREGLN A:302 , ARG A:342 , HOH A:982BINDING SITE FOR RESIDUE URE A 708
09AC9SOFTWAREPRO A:355 , ALA A:356 , GLU A:359 , HOH A:893BINDING SITE FOR RESIDUE URE A 709
10BC1SOFTWAREVAL A:541 , LEU A:593 , ASN A:594 , HOH A:1036BINDING SITE FOR RESIDUE URE A 710
11BC2SOFTWARETYR A:604 , PRO A:606BINDING SITE FOR RESIDUE URE A 711
12BC3SOFTWAREPRO A:606 , ILE A:607 , GLU A:608 , HOH A:878BINDING SITE FOR RESIDUE URE A 712
13BC4SOFTWARELEU A:244 , GLY A:245 , SER A:246 , LEU A:252 , LYS A:288BINDING SITE FOR RESIDUE URE A 713
14BC5SOFTWARELYS A:242 , MET A:243 , SER A:246BINDING SITE FOR RESIDUE URE A 714
15BC6SOFTWARESER A:250 , PHE A:253 , TYR A:254BINDING SITE FOR RESIDUE URE A 715
16BC7SOFTWAREGLN A:322 , ASN A:326BINDING SITE FOR RESIDUE URE A 716
17BC8SOFTWARELEU A:368 , THR A:371 , ASP A:372 , HOH A:882BINDING SITE FOR RESIDUE URE A 717
18BC9SOFTWAREARG A:474 , URE A:707 , HOH A:942 , HOH A:1016 , HOH A:1022 , HOH A:1043BINDING SITE FOR RESIDUE URE A 718
19CC1SOFTWAREARG A:329 , URE A:705 , URE A:742BINDING SITE FOR RESIDUE URE A 719
20CC2SOFTWARETHR A:332 , TYR A:333 , URE A:702 , HOH A:816 , HOH A:1029BINDING SITE FOR RESIDUE URE A 720
21CC3SOFTWAREGLU A:267 , GLN A:601BINDING SITE FOR RESIDUE URE A 721
22CC4SOFTWAREGLY A:422 , SER A:425 , ASN A:426 , GLU A:462 , PRO A:463 , CYS A:466 , HOH A:1000 , HOH A:1001BINDING SITE FOR RESIDUE URE A 722
23CC5SOFTWARELYS A:625 , GLU A:629BINDING SITE FOR RESIDUE URE A 723
24CC6SOFTWAREGLU A:310 , LEU A:487 , TYR A:489 , URE A:737 , HOH A:983BINDING SITE FOR RESIDUE URE A 724
25CC7SOFTWARELYS A:270 , ALA A:633 , GLU A:634 , GLY A:635 , HOH A:1061BINDING SITE FOR RESIDUE URE A 725
26CC8SOFTWARELEU A:275 , GLU A:445 , VAL A:448 , ARG A:449 , LEU A:452 , HIS A:488BINDING SITE FOR RESIDUE URE A 726
27CC9SOFTWAREASN A:594 , ILE A:596 , PRO A:597 , URE A:730 , URE A:732 , HOH A:950BINDING SITE FOR RESIDUE URE A 727
28DC1SOFTWAREHIS A:544 , GLN A:548 , GLN A:601 , SER A:605 , HOH A:883BINDING SITE FOR RESIDUE URE A 728
29DC2SOFTWAREILE A:588 , VAL A:589 , HOH A:809 , HOH A:886 , HOH A:1035BINDING SITE FOR RESIDUE URE A 729
30DC3SOFTWAREARG A:591 , GLY A:592 , ASN A:594 , URE A:727 , URE A:735 , HOH A:974 , HOH A:979BINDING SITE FOR RESIDUE URE A 730
31DC4SOFTWAREHOH A:945 , HOH A:1026BINDING SITE FOR RESIDUE URE A 731
32DC5SOFTWAREGLY A:307 , ASN A:308 , GLN A:309 , ARG A:591 , GLU A:626 , URE A:727 , URE A:735 , HOH A:903BINDING SITE FOR RESIDUE URE A 732
33DC6SOFTWAREARG A:515 , GLY A:575 , VAL A:613 , HOH A:876 , HOH A:1017BINDING SITE FOR RESIDUE URE A 733
34DC7SOFTWARETRP A:504 , VAL A:564BINDING SITE FOR RESIDUE URE A 734
35DC8SOFTWAREASN A:308 , GLN A:309 , GLU A:310 , URE A:730 , URE A:732BINDING SITE FOR RESIDUE URE A 735
36DC9SOFTWAREPRO A:521 , ALA A:522 , HOH A:932BINDING SITE FOR RESIDUE URE A 736
37EC1SOFTWAREILE A:314 , URE A:724BINDING SITE FOR RESIDUE URE A 737
38EC2SOFTWAREARG A:582 , GLU A:620BINDING SITE FOR RESIDUE URE A 738
39EC3SOFTWARELEU A:603 , LEU A:643BINDING SITE FOR RESIDUE URE A 739
40EC4SOFTWAREASN A:609 , URE A:741BINDING SITE FOR RESIDUE URE A 740
41EC5SOFTWAREARG A:612 , ARG A:647 , GLU A:649 , URE A:740BINDING SITE FOR RESIDUE URE A 741
42EC6SOFTWARETHR A:289 , ASN A:290 , URE A:705 , URE A:719BINDING SITE FOR RESIDUE URE A 742

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4EV9)

(-) Cis Peptide Bonds  (1, 1)

Asymmetric/Biological Unit
No.Residues
1Pro A:500 -Pro A:501

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4EV9)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4EV9)

(-) Exons   (0, 0)

(no "Exon" information available for 4EV9)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:492
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            
               SCOP domains d4ev9a_ A: beta-Catenin                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ............hhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhh........hhhhhhhhhhhh...hhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhh....hhhhhhhhhhhh.hhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhh.hhhhhhhhhhh.hhhhhhhhh...hhhhhhhhhhhhhhhh.hhhhhhhhhhh.hhhhhhhhh...hhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 4ev9 A 159 LLNDEDQVVVNKAAVMVHQLSKKEASRHAIMRSPQMVSAIVRTMQNTNDVETARCTAGTLHNLSHHREGLLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNKTNVKFLAITTDCLQILAYGNQESKLIILASGGPQALVNIMRTYTYEKLLWTTSRVLKVLSVCSSNKPAIVEAGGMQALGLHLTDPSQRLVQNCLWTLRNLSDAATKQEGMEGLLGTLVQLLGSDDINVVTCAAGILSNLTCNNYKNKMMVCQVGGIEALVRTVLRAGDREDITEPAICALRHLTSRHQEAEMAQNAVRLHYGLPVVVKLLHPPSHWPLIKATVGLIRNLALCPANHAPLREQGAIPRLVQLLVRAHQDTQREGVRMEEIVEGCTGALHILARDVHNRIVIRGLNTIPLFVQLLYSPIENIQRVAAGVLCELAQDKEAAEAIEAEGATAPLTELLHSRNEGVATYAAAVLFRM 662
                                   168       178       188       198       208       218       228       238       248       258       268       278       288       298       308       318       328       338       348       358       368       378       388       398       408       418       428       438       448       458       468       478       488       498       508       518       528       538       548||     570       580       590       600       610       620       630       640       650       660  
                                                                                                                                                                                                                                                                                                                                                                                                                                549|                                                                                                    
                                                                                                                                                                                                                                                                                                                                                                                                                                 562
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 1)

Asymmetric/Biological Unit
(-)
Class: All alpha proteins (14657)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4EV9)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4EV9)

(-) Gene Ontology  (265, 265)

Asymmetric/Biological Unit(hide GO term definitions)

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        CTNB1_MOUSE | Q02248: 1dow 1i7w 1i7x 1jpp 1m1e 1v18 2bct 3bct 3ouw 3oux 4ev8 4eva 4evp 4evt 4ons

(-) Related Entries Specified in the PDB File

3bct 4ev8 4eva 4evp 4evt