3PRT - JenaLib

Asymmetric Unit (16, 16)

No.	Name	Evidence	Residues	Description
01	AC1	SOFTWARE	HIS A:69 , ARG A:129 , ASN A:146 , ARG A:147 , TYR A:255 , GLU A:277 , GOL A:326 , GOL A:331 , HOH A:525	BINDING SITE FOR RESIDUE SO4 A 324
02	AC2	SOFTWARE	HIS A:69 , GLU A:72 , HIS A:204 , HOH A:525	BINDING SITE FOR RESIDUE ZN A 400
03	AC3	SOFTWARE	ASP A:56 , GLU A:57 , GLU A:61 , GLU A:104 , HOH A:555 , HOH A:556	BINDING SITE FOR RESIDUE CA A 401
04	AC4	SOFTWARE	SER A:50 , ASP A:51 , GLU A:57 , GLU A:59 , CA A:403 , HOH A:495	BINDING SITE FOR RESIDUE CA A 402
05	AC5	SOFTWARE	ASP A:51 , GLU A:57 , GLU A:59 , ASN A:101 , CA A:402 , HOH A:478	BINDING SITE FOR RESIDUE CA A 403
06	AC6	SOFTWARE	SER A:7 , TYR A:9 , GLU A:14 , HOH A:424 , HOH A:533	BINDING SITE FOR RESIDUE CA A 404
07	AC7	SOFTWARE	VAL A:16 , ASN A:20 , ASN A:25 , LYS A:32 , TRP A:45 , HOH A:342	BINDING SITE FOR RESIDUE SO4 A 325
08	AC8	SOFTWARE	ASN A:146 , SER A:215 , GLY A:251 , TYR A:255 , ALA A:257 , ASP A:262 , SO4 A:324 , HOH A:339	BINDING SITE FOR RESIDUE GOL A 326
09	AC9	SOFTWARE	PHE A:174 , ARG A:183 , ASN A:187 , TRP A:264 , GLN A:268 , HOH A:527 , HOH A:552	BINDING SITE FOR RESIDUE SO4 A 327
10	BC1	SOFTWARE	TYR A:118 , ARG A:132 , HOH A:350 , HOH A:560 , HOH A:561	BINDING SITE FOR RESIDUE GOL A 328
11	BC2	SOFTWARE	LYS A:270 , HOH A:358 , HOH A:375	BINDING SITE FOR RESIDUE GOL A 329
12	BC3	SOFTWARE	ARG A:71 , LYS A:152 , CYS A:156 , HOH A:416	BINDING SITE FOR RESIDUE GOL A 330
13	BC4	SOFTWARE	ARG A:129 , THR A:205 , TYR A:206 , TYR A:255 , GLU A:277 , PHE A:287 , SO4 A:324 , HOH A:361	BINDING SITE FOR RESIDUE GOL A 331
14	BC5	SOFTWARE	ASN A:52 , VAL A:53 , GLY A:54 , THR A:55 , HOH A:412	BINDING SITE FOR RESIDUE GOL A 332
15	BC6	SOFTWARE	GLY A:295 , ARG A:296 , HOH A:355	BINDING SITE FOR RESIDUE GOL A 333
16	BC7	SOFTWARE	HIS A:10 , GLU A:77 , LEU A:80 , TYR A:81 , ASP A:84 , ILE A:294 , HOH A:467 , HOH A:537	BINDING SITE FOR RESIDUE GOL A 334

SS Bonds (2, 2)

Cis Peptide Bonds (4, 4)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (0, 0)

PROSITE Motifs (2, 2)

Asymmetric Unit (2, 2)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	CARBOXYPEPT_ZN_1	PS00132	Zinc carboxypeptidases, zinc-binding region 1 signature.	CBPT_THEVU	158-180	1	A:60-82
2	CARBOXYPEPT_ZN_2	PS00133	Zinc carboxypeptidases, zinc-binding region 2 signature.	CBPT_THEVU	302-312	1	A:204-214

Biological Unit 1 (2, 2)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	CARBOXYPEPT_ZN_1	PS00132	Zinc carboxypeptidases, zinc-binding region 1 signature.	CBPT_THEVU	158-180	1	A:60-82
2	CARBOXYPEPT_ZN_2	PS00133	Zinc carboxypeptidases, zinc-binding region 2 signature.	CBPT_THEVU	302-312	1	A:204-214

Biological Unit 2 (2, 4)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	CARBOXYPEPT_ZN_1	PS00132	Zinc carboxypeptidases, zinc-binding region 1 signature.	CBPT_THEVU	158-180	2	A:60-82
2	CARBOXYPEPT_ZN_2	PS00133	Zinc carboxypeptidases, zinc-binding region 2 signature.	CBPT_THEVU	302-312	2	A:204-214

Exons (0, 0)

Sequences/Alignments

Asymmetric Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:323
 aligned with CBPT_THEVU | P29068 from UniProtKB/Swiss-Prot  Length:424

    Alignment length:323
                                   108       118       128       138       148       158       168       178       188       198       208       218       228       238       248       258       268       278       288       298       308       318       328       338       348       358       368       378       388       398       408       418   
           CBPT_THEVU    99 DFPSYDSGYHNYNEMVNKINTVASNYPNIVKKFSIGKSYEGRELWAVKISDNVGTDENEPEVLYTALHHAREHLTVEMALYTLDLFTQNYNLDSRITNLVNNREIYIVFNINPDGGEYDISSGSYKSWRKNRQPNSGSSYVGTDLNRNYGYKWGCCGGSSGSPSSETYRGRSAFSAPETAAMRDFINSRVVGGKQQIKTLITFHTYSELILYPYGYTYTDVPSDMTQDDFNVFKTMANTMAQTNGYTPQQASDLYITDGDMTDWAYGQHKIFAFTFEMYPTSYNPGFYPPDEVIGRETSRNKEAVLYVAEKADCPYSVIGKSC 421
               SCOP domains d3prta_ A: Carboxypeptidase T                                                                                                                                                                                                                                                                                                       SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..hhhhh...hhhhhhhhhhhhhhhh...eeeeeeee.....eeeeeee...........eeeeee......hhhhhhhhhhhhhhhhh...hhhhhhhhh..eeeee...hhhhhhhhhh......................hhhhh...........................hhhhhhhhhhhhhhee..ee.eeeeeeee....eeee.............hhhhhhhhhhhhhhhhhhhh.eeee.hhh.....hhhhhhhhhhh.eeeeee............hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -----------------------------------------------------------CARBOXYPEPT_ZN_1       -------------------------------------------------------------------------------------------------------------------------CARBOXYPEPT------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3prt A   1 DFPSYDSGYHNYNEMVNKINTVASNYPNIVKKFSIGKSYEGRELWAVKISDNVGTDENEPEVLYTALHHAREHLTVEMALYTLDLFTQNYNLDSRITNLVNNREIYIVFNINPDGGEYDISSGSYKSWRKNRQPNSGSSYVGTDLNRNYGYKWGCCGGSSGSPSSETYRGRSAFSAPETAAMRDFINSRVVGGKQQIKTLITFHTYSELILYPYSYTYTDVPSDMTQDDFNVFKTMANTMAQTNGYTPQQGSDLYIADGGMDDWAYGQHKIFAFTFEMYPTSYNPGFYPPDEVIGRETSRNKEAVLYVAEKADCPYSVIGKSC 323
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

Classification and Annotation

SCOP Domains (1, 1)

CATH Domains (0, 0)

Pfam Domains (0, 0)

Gene Ontology (8, 8)

Asymmetric Unit(hide GO term definitions)

Chain A (CBPT_THEVU | P29068)

molecular function
	GO:0004180	carboxypeptidase activity	Catalysis of the hydrolysis of the terminal or penultimate peptide bond at the C-terminal end of a peptide or polypeptide.
	GO:0016787	hydrolase activity	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3.
	GO:0046872	metal ion binding	Interacting selectively and non-covalently with any metal ion.
	GO:0004181	metallocarboxypeptidase activity	Catalysis of the hydrolysis of C-terminal amino acid residues from a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions.
	GO:0008237	metallopeptidase activity	Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions.
	GO:0008233	peptidase activity	Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid.
	GO:0008270	zinc ion binding	Interacting selectively and non-covalently with zinc (Zn) ions.
biological process
	GO:0006508	proteolysis	The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds.

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	Cis Peptide Bonds
		Asn A:284 - Pro A:285	[ RasMol ]
		Pro A:213 - Tyr A:214	[ RasMol ]
		Thr A:205 - Tyr A:206	[ RasMol ]
		Tyr A:279 - Pro A:280	[ RasMol ]

Biological Units
	Complete Structure
		Biological Unit 1	[ Jena3D ]
		Biological Unit 2	[ Jena3D ]

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	3prt
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	CBPT_THEVU \| P29068
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	3.4.17.18
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Description

Compounds

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (4, 16)

Sites (16, 16)