Show PDB file:   
         Plain Text   HTML   (compressed file size)
QuickSearch:   
by PDB,NDB,UniProt,PROSITE Code or Search Term(s)  
(-)Asym./Biol. Unit
(-)Asym./Biol. Unit - sites
collapse expand < >
Image Asym./Biol. Unit
Asym./Biol. Unit  (Jmol Viewer)
Image Asym./Biol. Unit - sites
Asym./Biol. Unit - sites  (Jmol Viewer)

(-) Description

Title :  THE CRYSTAL STRUCTURE OF CANDIDA GLABRATA THI6, A BIFUNCTIONAL ENZYME INVOLVED IN THIAMIN BIOSYHTHESIS OF EUKARYOTES
 
Authors :  D. Paul, A. Chatterjee, T. P. Begley, S. E. Ealick
Date :  21 Jun 10  (Deposition) - 10 Nov 10  (Release) - 29 May 13  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  3.10
Chains :  Asym./Biol. Unit :  A,B,C,D,E,F
Keywords :  Thi6, Bifunctional Enzyme, Thiamin Biosynthesis, Eukaryoyes, Transferase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  D. Paul, A. Chatterjee, T. P. Begley, S. E. Ealick
Domain Organization In Candida Glabrata Thi6, A Bifunctiona Enzyme Required For Thiamin Biosynthesis In Eukaryotes .
Biochemistry V. 49 9922 2010
PubMed-ID: 20968298  |  Reference-DOI: 10.1021/BI101008U

(-) Compounds

Molecule 1 - THIAMINE BIOSYNTHETIC BIFUNCTIONAL ENZYME
    Chains: A, B, C, D, E, F
    EC Number: 2.5.1.3, 2.7.1.50
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: THT
    Expression System Strain: BL21STAR(DE3)
    Expression System Taxid: 469008
    Expression System Vector Type: PLASMID
    Gene: CAGL0E05808G, THI6
    Organism Common: YEAST
    Organism Scientific: CANDIDA GLABRATA
    Organism Taxid: 5478

 Structural Features

(-) Chains, Units

  123456
Asymmetric/Biological Unit : ABCDEF

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (3, 18)

Asymmetric/Biological Unit (3, 18)
No.NameCountTypeFull Name
1MG6Ligand/IonMAGNESIUM ION
2POP6Ligand/IonPYROPHOSPHATE 2-
3TPS6Ligand/IonTHIAMIN PHOSPHATE

(-) Sites  (18, 18)

Asymmetric Unit (18, 18)
No.NameEvidenceResiduesDescription
01AC1SOFTWAREASP A:76 , ASP A:95 , POP A:4001BINDING SITE FOR RESIDUE MG A 3001
02AC2SOFTWAREASN B:75 , ASP B:76 , GLY B:92 , ASP B:95 , POP B:4002BINDING SITE FOR RESIDUE MG B 3002
03AC3SOFTWAREASP C:76 , ASP C:95 , POP C:4003BINDING SITE FOR RESIDUE MG C 3003
04AC4SOFTWARELYS D:47 , ASP D:76 , ASP D:95 , POP D:4004BINDING SITE FOR RESIDUE MG D 3004
05AC5SOFTWARELYS E:47 , ASP E:76 , GLY E:92 , ASP E:95 , POP E:4005BINDING SITE FOR RESIDUE MG E 3005
06AC6SOFTWAREASP F:76 , ASP F:95 , POP F:4006BINDING SITE FOR RESIDUE MG F 3006
07AC7SOFTWARETYR A:13 , GLN A:43 , ARG A:45 , HIS A:90 , SER A:114 , THR A:143 , THR A:145 , LYS A:146 , ILE A:179 , GLY A:180 , GLY A:181 , VAL A:209 , SER A:210 , POP A:4001BINDING SITE FOR RESIDUE TPS A 2001
08AC8SOFTWARETYR B:13 , GLN B:43 , ARG B:45 , HIS B:90 , THR B:143 , THR B:145 , ILE B:179 , GLY B:180 , GLY B:181 , CYS B:207 , VAL B:209 , SER B:210 , POP B:4002BINDING SITE FOR RESIDUE TPS B 2002
09AC9SOFTWAREGLN C:43 , ARG C:45 , HIS C:90 , SER C:114 , THR C:143 , THR C:145 , ILE C:179 , GLY C:181 , VAL C:209 , SER C:210 , POP C:4003BINDING SITE FOR RESIDUE TPS C 2003
10BC1SOFTWAREGLN D:43 , ARG D:45 , ASN D:75 , HIS D:90 , SER D:114 , THR D:143 , THR D:145 , ILE D:179 , GLY D:180 , GLY D:181 , VAL D:209 , SER D:210 , POP D:4004BINDING SITE FOR RESIDUE TPS D 2004
11BC2SOFTWAREGLN E:43 , ARG E:45 , ASN E:75 , HIS E:90 , SER E:114 , THR E:143 , THR E:145 , ILE E:179 , GLY E:180 , GLY E:181 , VAL E:209 , SER E:210 , POP E:4005BINDING SITE FOR RESIDUE TPS E 2005
12BC3SOFTWAREGLN F:43 , ARG F:45 , HIS F:90 , SER F:114 , THR F:143 , THR F:145 , ILE F:179 , GLY F:180 , GLY F:181 , VAL F:209 , SER F:210 , POP F:4006BINDING SITE FOR RESIDUE TPS F 2006
13BC4SOFTWAREARG A:45 , LYS A:47 , ASN A:75 , ASP A:76 , GLY A:92 , ASP A:95 , SER A:114 , LYS A:146 , TPS A:2001 , MG A:3001BINDING SITE FOR RESIDUE POP A 4001
14BC5SOFTWAREARG B:45 , LYS B:47 , ASN B:75 , ASP B:76 , GLY B:92 , ASP B:95 , SER B:114 , LYS B:146 , TPS B:2002 , MG B:3002BINDING SITE FOR RESIDUE POP B 4002
15BC6SOFTWAREARG C:45 , LYS C:47 , ASN C:75 , ASP C:76 , GLY C:92 , ASP C:95 , SER C:114 , TPS C:2003 , MG C:3003BINDING SITE FOR RESIDUE POP C 4003
16BC7SOFTWAREARG D:45 , LYS D:47 , ASN D:75 , ASP D:76 , GLY D:92 , SER D:114 , LYS D:146 , TPS D:2004 , MG D:3004BINDING SITE FOR RESIDUE POP D 4004
17BC8SOFTWAREARG E:45 , LYS E:47 , ASN E:75 , ASP E:76 , GLY E:92 , SER E:114 , LYS E:146 , TPS E:2005 , MG E:3005BINDING SITE FOR RESIDUE POP E 4005
18BC9SOFTWAREARG F:45 , ASN F:75 , ASP F:76 , GLY F:92 , SER F:114 , TPS F:2006 , MG F:3006BINDING SITE FOR RESIDUE POP F 4006

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 3NM3)

(-) Cis Peptide Bonds  (13, 13)

Asymmetric/Biological Unit
No.Residues
1Asn A:75 -Asp A:76
2Lys A:435 -Gly A:436
3Asn B:75 -Asp B:76
4Lys B:435 -Gly B:436
5Asn C:75 -Asp C:76
6Lys C:435 -Gly C:436
7Asn D:75 -Asp D:76
8Lys D:435 -Gly D:436
9Asn E:75 -Asp E:76
10Lys E:435 -Gly E:436
11Asn F:75 -Asp F:76
12Val F:208 -Val F:209
13Lys F:435 -Gly F:436

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 3NM3)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 3NM3)

(-) Exons   (0, 0)

(no "Exon" information available for 3NM3)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:510
 aligned with Q6FV03_CANGA | Q6FV03 from UniProtKB/TrEMBL  Length:540

    Alignment length:539
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451       461       471       481       491       501       511       521       531         
         Q6FV03_CANGA     2 KFSKEQFDYSLYLVTDSGMIPEGKTLYGQVEAGLQNGVTLVQIREKDADTKFFIEEALQIKELCHAHNVPLIINDRIDVAMAIGADGIHVGQDDMPIPMIRKLVGPDMVIGWSVGFPEEVDELSKMGPDMVDYIGVGTLFPTLTKKNPKKAPMGTAGAIRVLDALERNNAHWCRTVGIGGLHPDNIERVLYQCVSSNGKRSLDGICVVSDIIASLDAAKSTKILRGLIDKTDYKFVNIGLSTKNSLTTTDEIQSIISNTLKARPLVQHITNKVHQNFGANVTLALGSSPIMSEIQSEVNDLAAIPHATLLLNTGSVAPPEMLKAAIRAYNDVKRPIVFDPVGYSATETRLLLNNKLLTFGQFSCIKGNSSEILGLAELNKERMKGVDASSGISNELLIQATKIVAFKYKTVAVCTGEFDFIADGTIEGKYSLSKGTNGTSVEDIPCVAVEAGPIEIMGDITASGCSLGSTIACMIGGQPSEGNLFHAVVAGVMLYKAAGKIASEKCNGSGSFQVELIDALYRLTRENTPVTWAPKLTHT 540
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..........eeee..........hhhhhhhhhhh....eeeee....hhhhhhhhhhhhhhhhhhh...eeee.hhhhhhhh...eeee.....hhhhhhhhhh...eeeeee..hhhhhhhhhh......eeee...........----.hhhhhhhhhhhhhhhh.....eeeee...hhhhhhhhhhhh..........eeee........hhhhhhhhhhhhhhh.................hhhhhhhhhhhhhhhh..eeee.hhhhhhhhhhhhhhh...ee...hhhhhhhhh.....eeeee.....hhhhhhhhhhhhhhh...eeee...--.hhhhhhhhhhhh......eeeeehhhhhhhh..--------------.hhhhhhhhhhhhhhh..eeeee..eeeeee.hhhhh..........hhhhh.eeeee....---------.hhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhh..........ee. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3nm3 A   2 KFSKEQFDYSLYLVTDSGMIPEGKTLYGQVEAGLQNGVTLVQIREKDADTKFFIEEALQIKELCHAHNVPLIINDRIDVAMAIGADGIHVGQDDMPIPMIRKLVGPDMVIGWSVGFPEEVDELSKMGPDMVDYIGVGTLFPTLTKKN----PMGTAGAIRVLDALERNNAHWCRTVGIGGLHPDNIERVLYQCVSSNGKRSLDGICVVSDIIASLDAAKSTKILRGLIDKTDYKFVNIGLSTKNSLTTTDEIQSIISNTLKARPLVQHITNKVHQNFGANVTLALGSSPIMSEIQSEVNDLAAIPHATLLLNTGSVAPPEMLKAAIRAYNDVKRPIVFDPVG--ATETRLLLNNKLLTFGQFSCIKGNSSEILGLAEL--------------SNELLIQATKIVAFKYKTVAVCTGEFDFIADGTIEGKYSLSKGTNGTSVEDIPCVAVEAGPI---------GCSLGSTIACMIGGQPSEGNLFHAVVAGVMLYKAAGKIASEKCNGSGSFQVELIDALYRLTRENTPVTWAPKLTHT 540
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141      |  - |     161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341 |  |  351       361       371       | -         -  |    401       411       421       431       441       451   |     -   |   471       481       491       501       511       521       531         
                                                                                                                                                                            148  153                                                                                                                                                                                           343  |                              379            394                                                          455       465                                                                           
                                                                                                                                                                                                                                                                                                                                                                                  346                                                                                                                                                                                                  


Chain B from PDB  Type:PROTEIN  Length:508
 aligned with Q6FV03_CANGA | Q6FV03 from UniProtKB/TrEMBL  Length:540

    Alignment length:539
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451       461       471       481       491       501       511       521       531         
         Q6FV03_CANGA     2 KFSKEQFDYSLYLVTDSGMIPEGKTLYGQVEAGLQNGVTLVQIREKDADTKFFIEEALQIKELCHAHNVPLIINDRIDVAMAIGADGIHVGQDDMPIPMIRKLVGPDMVIGWSVGFPEEVDELSKMGPDMVDYIGVGTLFPTLTKKNPKKAPMGTAGAIRVLDALERNNAHWCRTVGIGGLHPDNIERVLYQCVSSNGKRSLDGICVVSDIIASLDAAKSTKILRGLIDKTDYKFVNIGLSTKNSLTTTDEIQSIISNTLKARPLVQHITNKVHQNFGANVTLALGSSPIMSEIQSEVNDLAAIPHATLLLNTGSVAPPEMLKAAIRAYNDVKRPIVFDPVGYSATETRLLLNNKLLTFGQFSCIKGNSSEILGLAELNKERMKGVDASSGISNELLIQATKIVAFKYKTVAVCTGEFDFIADGTIEGKYSLSKGTNGTSVEDIPCVAVEAGPIEIMGDITASGCSLGSTIACMIGGQPSEGNLFHAVVAGVMLYKAAGKIASEKCNGSGSFQVELIDALYRLTRENTPVTWAPKLTHT 540
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..........eeee..........hhhhhhhhhhh....eeeee......hhhhhhhhhhhhhhhhh...eeee.hhhhhhhhh..eeee.....hhhhhhhhhh...eeeeee..hhhhhhhhh.......eeee.........------.hhhhhhhhhhhhhhhh.....eeeee......hhhhhhhhh..........eeeehhhhhh..hhhhhhhhhhhhhhh.................hhhhhhhhhhhhhhhh.eeeee.hhhhhhhhhhhhhhh..eee.....hhhhhhhhh...eeeee.....hhhhhhhhhhhhhhh...eeee...--.hhhhhhhhhhhh......eeeeehhhhhhhhh.--------------.hhhhhhhhhhhhhhh..eeeee..eeeeee.hhhhh..........hhhhh.eeeee....---------.hhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhh..hhhhh..eeee. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3nm3 B   2 KFSKEQFDYSLYLVTDSGMIPEGKTLYGQVEAGLQNGVTLVQIREKDADTKFFIEEALQIKELCHAHNVPLIINDRIDVAMAIGADGIHVGQDDMPIPMIRKLVGPDMVIGWSVGFPEEVDELSKMGPDMVDYIGVGTLFPTLTK------PMGTAGAIRVLDALERNNAHWCRTVGIGGLHPDNIERVLYQCVSSNGKRSLDGICVVSDIIASLDAAKSTKILRGLIDKTDYKFVNIGLSTKNSLTTTDEIQSIISNTLKARPLVQHITNKVHQNFGANVTLALGSSPIMSEIQSEVNDLAAIPHATLLLNTGSVAPPEMLKAAIRAYNDVKRPIVFDPVG--ATETRLLLNNKLLTFGQFSCIKGNSSEILGLAEL--------------SNELLIQATKIVAFKYKTVAVCTGEFDFIADGTIEGKYSLSKGTNGTSVEDIPCVAVEAGPI---------GCSLGSTIACMIGGQPSEGNLFHAVVAGVMLYKAAGKIASEKCNGSGSFQVELIDALYRLTRENTPVTWAPKLTHT 540
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141    |    - |     161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341 |  |  351       361       371       | -         -  |    401       411       421       431       441       451   |     -   |   471       481       491       501       511       521       531         
                                                                                                                                                                          146    153                                                                                                                                                                                           343  |                              379            394                                                          455       465                                                                           
                                                                                                                                                                                                                                                                                                                                                                                  346                                                                                                                                                                                                  


Chain C from PDB  Type:PROTEIN  Length:510
 aligned with Q6FV03_CANGA | Q6FV03 from UniProtKB/TrEMBL  Length:540

    Alignment length:539
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451       461       471       481       491       501       511       521       531         
         Q6FV03_CANGA     2 KFSKEQFDYSLYLVTDSGMIPEGKTLYGQVEAGLQNGVTLVQIREKDADTKFFIEEALQIKELCHAHNVPLIINDRIDVAMAIGADGIHVGQDDMPIPMIRKLVGPDMVIGWSVGFPEEVDELSKMGPDMVDYIGVGTLFPTLTKKNPKKAPMGTAGAIRVLDALERNNAHWCRTVGIGGLHPDNIERVLYQCVSSNGKRSLDGICVVSDIIASLDAAKSTKILRGLIDKTDYKFVNIGLSTKNSLTTTDEIQSIISNTLKARPLVQHITNKVHQNFGANVTLALGSSPIMSEIQSEVNDLAAIPHATLLLNTGSVAPPEMLKAAIRAYNDVKRPIVFDPVGYSATETRLLLNNKLLTFGQFSCIKGNSSEILGLAELNKERMKGVDASSGISNELLIQATKIVAFKYKTVAVCTGEFDFIADGTIEGKYSLSKGTNGTSVEDIPCVAVEAGPIEIMGDITASGCSLGSTIACMIGGQPSEGNLFHAVVAGVMLYKAAGKIASEKCNGSGSFQVELIDALYRLTRENTPVTWAPKLTHT 540
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..hhhhh...eeee.hhhhh....hhhhhhhhhhhh...eeeee....hhhhhhhhhhhhhhhhhhh...eeee.hhhhhhhh...eeee.....hhhhhhhhhh...eeeeee..hhhhhhhhh.......eeee...........--.--hhhhhhhhhhhhhhhh.....eeeee......hhhhhhhhh...........eee........hhhhhhhhhhhhhh..................hhhhhhhhhhhhhhhh.eeeee.hhhhhhhhhhhhhhh..eee......hhhhhh....eeeeee.....hhhhhhhhhhhhhhh...eeee...--.hhhhhhhhhhhh......eeeeehhhhhhhhh.--------------.hhhhhhhhhhhhhhh..eeeee..eeeeee.hhhhh..........hhhhh.eeeee....---------hhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhh.hhhhh..eeee. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3nm3 C   2 KFSKEQFDYSLYLVTDSGMIPEGKTLYGQVEAGLQNGVTLVQIREKDADTKFFIEEALQIKELCHAHNVPLIINDRIDVAMAIGADGIHVGQDDMPIPMIRKLVGPDMVIGWSVGFPEEVDELSKMGPDMVDYIGVGTLFPTLTKKN--K--MGTAGAIRVLDALERNNAHWCRTVGIGGLHPDNIERVLYQCVSSNGKRSLDGICVVSDIIASLDAAKSTKILRGLIDKTDYKFVNIGLSTKNSLTTTDEIQSIISNTLKARPLVQHITNKVHQNFGANVTLALGSSPIMSEIQSEVNDLAAIPHATLLLNTGSVAPPEMLKAAIRAYNDVKRPIVFDPVG--ATETRLLLNNKLLTFGQFSCIKGNSSEILGLAEL--------------SNELLIQATKIVAFKYKTVAVCTGEFDFIADGTIEGKYSLSKGTNGTSVEDIPCVAVEAGPI---------GCSLGSTIACMIGGQPSEGNLFHAVVAGVMLYKAAGKIASEKCNGSGSFQVELIDALYRLTRENTPVTWAPKLTHT 540
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141      |151  |    161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341 |  |  351       361       371       | -         -  |    401       411       421       431       441       451   |     -   |   471       481       491       501       511       521       531         
                                                                                                                                                                            148  |  |                                                                                                                                                                                          343  |                              379            394                                                          455       465                                                                           
                                                                                                                                                                               151  |                                                                                                                                                                                             346                                                                                                                                                                                                  
                                                                                                                                                                                  154                                                                                                                                                                                                                                                                                                                                                                                                  


Chain D from PDB  Type:PROTEIN  Length:511
 aligned with Q6FV03_CANGA | Q6FV03 from UniProtKB/TrEMBL  Length:540

    Alignment length:539
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451       461       471       481       491       501       511       521       531         
         Q6FV03_CANGA     2 KFSKEQFDYSLYLVTDSGMIPEGKTLYGQVEAGLQNGVTLVQIREKDADTKFFIEEALQIKELCHAHNVPLIINDRIDVAMAIGADGIHVGQDDMPIPMIRKLVGPDMVIGWSVGFPEEVDELSKMGPDMVDYIGVGTLFPTLTKKNPKKAPMGTAGAIRVLDALERNNAHWCRTVGIGGLHPDNIERVLYQCVSSNGKRSLDGICVVSDIIASLDAAKSTKILRGLIDKTDYKFVNIGLSTKNSLTTTDEIQSIISNTLKARPLVQHITNKVHQNFGANVTLALGSSPIMSEIQSEVNDLAAIPHATLLLNTGSVAPPEMLKAAIRAYNDVKRPIVFDPVGYSATETRLLLNNKLLTFGQFSCIKGNSSEILGLAELNKERMKGVDASSGISNELLIQATKIVAFKYKTVAVCTGEFDFIADGTIEGKYSLSKGTNGTSVEDIPCVAVEAGPIEIMGDITASGCSLGSTIACMIGGQPSEGNLFHAVVAGVMLYKAAGKIASEKCNGSGSFQVELIDALYRLTRENTPVTWAPKLTHT 540
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..hhhhh...eeee..........hhhhhhhhhhh....eeeee......hhhhhhhhhhhhhhhhh...eeee.hhhhhhhhh..eeee.....hhhhhhhhhh...eeeeee..hhhhhhhhh.......eeee...........-..--hhhhhhhhhhhhhhhh.....eeeee......hhhhhhhhh..........eeee........hhhhhhhhhhhhhh..................hhhhhhhhhhhhhhh..eeeee.hhhhhhhhhhhhhhh..eee......hhhhhh....eeeee......hhhhhhhhhhhhhhh...eee....--.hhhhhhhhhhhh......eeeeehhhhhhhhh.--------------.hhhhhhhhhhhhhhh..eeeee...eeeee.hhhhh..........hhhhh.eeee.....---------.hhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhh.hhhhh....... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3nm3 D   2 KFSKEQFDYSLYLVTDSGMIPEGKTLYGQVEAGLQNGVTLVQIREKDADTKFFIEEALQIKELCHAHNVPLIINDRIDVAMAIGADGIHVGQDDMPIPMIRKLVGPDMVIGWSVGFPEEVDELSKMGPDMVDYIGVGTLFPTLTKKN-KK--MGTAGAIRVLDALERNNAHWCRTVGIGGLHPDNIERVLYQCVSSNGKRSLDGICVVSDIIASLDAAKSTKILRGLIDKTDYKFVNIGLSTKNSLTTTDEIQSIISNTLKARPLVQHITNKVHQNFGANVTLALGSSPIMSEIQSEVNDLAAIPHATLLLNTGSVAPPEMLKAAIRAYNDVKRPIVFDPVG--ATETRLLLNNKLLTFGQFSCIKGNSSEILGLAEL--------------SNELLIQATKIVAFKYKTVAVCTGEFDFIADGTIEGKYSLSKGTNGTSVEDIPCVAVEAGPI---------GCSLGSTIACMIGGQPSEGNLFHAVVAGVMLYKAAGKIASEKCNGSGSFQVELIDALYRLTRENTPVTWAPKLTHT 540
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141      |151  |    161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341 |  |  351       361       371       | -         -  |    401       411       421       431       441       451   |     -   |   471       481       491       501       511       521       531         
                                                                                                                                                                            148 ||  |                                                                                                                                                                                          343  |                              379            394                                                          455       465                                                                           
                                                                                                                                                                              150|  |                                                                                                                                                                                             346                                                                                                                                                                                                  
                                                                                                                                                                               151  |                                                                                                                                                                                                                                                                                                                                                                                                  
                                                                                                                                                                                  154                                                                                                                                                                                                                                                                                                                                                                                                  


Chain E from PDB  Type:PROTEIN  Length:507
 aligned with Q6FV03_CANGA | Q6FV03 from UniProtKB/TrEMBL  Length:540

    Alignment length:539
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451       461       471       481       491       501       511       521       531         
         Q6FV03_CANGA     2 KFSKEQFDYSLYLVTDSGMIPEGKTLYGQVEAGLQNGVTLVQIREKDADTKFFIEEALQIKELCHAHNVPLIINDRIDVAMAIGADGIHVGQDDMPIPMIRKLVGPDMVIGWSVGFPEEVDELSKMGPDMVDYIGVGTLFPTLTKKNPKKAPMGTAGAIRVLDALERNNAHWCRTVGIGGLHPDNIERVLYQCVSSNGKRSLDGICVVSDIIASLDAAKSTKILRGLIDKTDYKFVNIGLSTKNSLTTTDEIQSIISNTLKARPLVQHITNKVHQNFGANVTLALGSSPIMSEIQSEVNDLAAIPHATLLLNTGSVAPPEMLKAAIRAYNDVKRPIVFDPVGYSATETRLLLNNKLLTFGQFSCIKGNSSEILGLAELNKERMKGVDASSGISNELLIQATKIVAFKYKTVAVCTGEFDFIADGTIEGKYSLSKGTNGTSVEDIPCVAVEAGPIEIMGDITASGCSLGSTIACMIGGQPSEGNLFHAVVAGVMLYKAAGKIASEKCNGSGSFQVELIDALYRLTRENTPVTWAPKLTHT 540
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..hhhhh...eeee..........hhhhhhhhhhhh...eeeee....hhhhhhhhhhhhhhhhhhh...eeee.hhhhhhhh...eeee.....hhhhhhhhhh...eeeeee.hhhhhhhhhh.......eeee.........-------hhhhhhhhhhhhhhhh.....eeeee......hhhhhhhhh..........eeee........hhhhhhhhhhhhhh..................hhhhhhhhhhhhhhh..eeeee.hhhhhhhhhhhhhhh..eee......hhhhhh....eeeeee.....hhhhhhhhhhhhhhh...eeee...--.hhhhhhhhhhhh......eeeeehhhhhhhhh.--------------.hhhhhhhhhhhhhhh..eeeee..eeeeee.hhhhh................eeeee....---------hhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhh.hhhhh..eeee. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3nm3 E   2 KFSKEQFDYSLYLVTDSGMIPEGKTLYGQVEAGLQNGVTLVQIREKDADTKFFIEEALQIKELCHAHNVPLIINDRIDVAMAIGADGIHVGQDDMPIPMIRKLVGPDMVIGWSVGFPEEVDELSKMGPDMVDYIGVGTLFPTLTK-------MGTAGAIRVLDALERNNAHWCRTVGIGGLHPDNIERVLYQCVSSNGKRSLDGICVVSDIIASLDAAKSTKILRGLIDKTDYKFVNIGLSTKNSLTTTDEIQSIISNTLKARPLVQHITNKVHQNFGANVTLALGSSPIMSEIQSEVNDLAAIPHATLLLNTGSVAPPEMLKAAIRAYNDVKRPIVFDPVG--ATETRLLLNNKLLTFGQFSCIKGNSSEILGLAEL--------------SNELLIQATKIVAFKYKTVAVCTGEFDFIADGTIEGKYSLSKGTNGTSVEDIPCVAVEAGPI---------GCSLGSTIACMIGGQPSEGNLFHAVVAGVMLYKAAGKIASEKCNGSGSFQVELIDALYRLTRENTPVTWAPKLTHT 540
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141    |    -  |    161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341 |  |  351       361       371       | -         -  |    401       411       421       431       441       451   |     -   |   471       481       491       501       511       521       531         
                                                                                                                                                                          146     154                                                                                                                                                                                          343  |                              379            394                                                          455       465                                                                           
                                                                                                                                                                                                                                                                                                                                                                                  346                                                                                                                                                                                                  


Chain F from PDB  Type:PROTEIN  Length:507
 aligned with Q6FV03_CANGA | Q6FV03 from UniProtKB/TrEMBL  Length:540

    Alignment length:539
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451       461       471       481       491       501       511       521       531         
         Q6FV03_CANGA     2 KFSKEQFDYSLYLVTDSGMIPEGKTLYGQVEAGLQNGVTLVQIREKDADTKFFIEEALQIKELCHAHNVPLIINDRIDVAMAIGADGIHVGQDDMPIPMIRKLVGPDMVIGWSVGFPEEVDELSKMGPDMVDYIGVGTLFPTLTKKNPKKAPMGTAGAIRVLDALERNNAHWCRTVGIGGLHPDNIERVLYQCVSSNGKRSLDGICVVSDIIASLDAAKSTKILRGLIDKTDYKFVNIGLSTKNSLTTTDEIQSIISNTLKARPLVQHITNKVHQNFGANVTLALGSSPIMSEIQSEVNDLAAIPHATLLLNTGSVAPPEMLKAAIRAYNDVKRPIVFDPVGYSATETRLLLNNKLLTFGQFSCIKGNSSEILGLAELNKERMKGVDASSGISNELLIQATKIVAFKYKTVAVCTGEFDFIADGTIEGKYSLSKGTNGTSVEDIPCVAVEAGPIEIMGDITASGCSLGSTIACMIGGQPSEGNLFHAVVAGVMLYKAAGKIASEKCNGSGSFQVELIDALYRLTRENTPVTWAPKLTHT 540
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
           Pfam domains (1) ----------TMP-TENI-3nm3F07 F:12-212                                                                                                                                                                                --------------------------------------------HK-3nm3F01 F:257-527                                                                                                                                                                                                                                                           ------------- Pfam domains (1)
           Pfam domains (2) ----------TMP-TENI-3nm3F08 F:12-212                                                                                                                                                                                --------------------------------------------HK-3nm3F02 F:257-527                                                                                                                                                                                                                                                           ------------- Pfam domains (2)
           Pfam domains (3) ----------TMP-TENI-3nm3F09 F:12-212                                                                                                                                                                                --------------------------------------------HK-3nm3F03 F:257-527                                                                                                                                                                                                                                                           ------------- Pfam domains (3)
           Pfam domains (4) ----------TMP-TENI-3nm3F10 F:12-212                                                                                                                                                                                --------------------------------------------HK-3nm3F04 F:257-527                                                                                                                                                                                                                                                           ------------- Pfam domains (4)
           Pfam domains (5) ----------TMP-TENI-3nm3F11 F:12-212                                                                                                                                                                                --------------------------------------------HK-3nm3F05 F:257-527                                                                                                                                                                                                                                                           ------------- Pfam domains (5)
           Pfam domains (6) ----------TMP-TENI-3nm3F12 F:12-212                                                                                                                                                                                --------------------------------------------HK-3nm3F06 F:257-527                                                                                                                                                                                                                                                           ------------- Pfam domains (6)
         Sec.struct. author ..hhhhh...eeee..........hhhhhhhhhhh....eeeee......hhhhhhhhhhhhhhhhh...eeee.hhhhhhhh...eeee.....hhhhhhhhhh...eeeeee..hhhhhhhhh.......eeee.........-------hhhhhhhhhhhhhhhh.....eeeee......hhhhhhhhh..........eee.........hhhhhhhhhhhhhhh.................hhhhhhhhhhhhhhhh.eeeee....hhhhhhhhhhhh..eee......hhhhhh....eeeeee.....hhhhhhhhhhhhhhh...eeee...--.hhhhhhhhhhhh......eeeeehhhhhhhhh.--------------.hhhhhhhhhhhhhhh..eeeee...eeeee.hhhhh................eeeee....---------.hhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhh.hhhhh..eeee. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3nm3 F   2 KFSKEQFDYSLYLVTDSGMIPEGKTLYGQVEAGLQNGVTLVQIREKDADTKFFIEEALQIKELCHAHNVPLIINDRIDVAMAIGADGIHVGQDDMPIPMIRKLVGPDMVIGWSVGFPEEVDELSKMGPDMVDYIGVGTLFPTLTK-------MGTAGAIRVLDALERNNAHWCRTVGIGGLHPDNIERVLYQCVSSNGKRSLDGICVVSDIIASLDAAKSTKILRGLIDKTDYKFVNIGLSTKNSLTTTDEIQSIISNTLKARPLVQHITNKVHQNFGANVTLALGSSPIMSEIQSEVNDLAAIPHATLLLNTGSVAPPEMLKAAIRAYNDVKRPIVFDPVG--ATETRLLLNNKLLTFGQFSCIKGNSSEILGLAEL--------------SNELLIQATKIVAFKYKTVAVCTGEFDFIADGTIEGKYSLSKGTNGTSVEDIPCVAVEAGPI---------GCSLGSTIACMIGGQPSEGNLFHAVVAGVMLYKAAGKIASEKCNGSGSFQVELIDALYRLTRENTPVTWAPKLTHT 540
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141    |    -  |    161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341 |  |  351       361       371       | -         -  |    401       411       421       431       441       451   |     -   |   471       481       491       501       511       521       531         
                                                                                                                                                                          146     154                                                                                                                                                                                          343  |                              379            394                                                          455       465                                                                           
                                                                                                                                                                                                                                                                                                                                                                                  346
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 3NM3)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 3NM3)

(-) Pfam Domains  (2, 12)

Asymmetric/Biological Unit
(-)
Clan: Ribokinase (55)
(-)
Clan: TIM_barrel (694)

(-) Gene Ontology  (8, 8)

Asymmetric/Biological Unit(hide GO term definitions)
Chain A,B,C,D,E,F   (Q6FV03_CANGA | Q6FV03)
molecular function
    GO:0003824    catalytic activity    Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
    GO:0004417    hydroxyethylthiazole kinase activity    Catalysis of the reaction: 5-(2-hydroxyethyl)-4-methylthiazole + ATP = 4-methyl-5-(2-phosphoethyl)-thiazole + ADP + 2 H(+).
    GO:0046872    metal ion binding    Interacting selectively and non-covalently with any metal ion.
    GO:0000166    nucleotide binding    Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
    GO:0004789    thiamine-phosphate diphosphorylase activity    Catalysis of the reaction: 4-amino-2-methyl-5-diphosphomethylpyrimidine + 4-methyl-5-(2-phosphoethyl)-thiazole + H(+) = diphosphate + thiamine phosphate.
biological process
    GO:0016310    phosphorylation    The process of introducing a phosphate group into a molecule, usually with the formation of a phosphoric ester, a phosphoric anhydride or a phosphoric amide.
    GO:0009228    thiamine biosynthetic process    The chemical reactions and pathways resulting in the formation of thiamine (vitamin B1), a water soluble vitamin present in fresh vegetables and meats, especially liver.
cellular component
    GO:0005829    cytosol    The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.

 Visualization

(-) Interactive Views

Asymmetric/Biological Unit
  Complete Structure
    Jena3D(integrated viewing of ligand, site, SAP, PROSITE, SCOP information)
    WebMol | AstexViewer[tm]@PDBe
(Java Applets, require no local installation except for Java; loading may be slow)
    STRAP
(Java WebStart application, automatic local installation, requires Java; full application with system access!)
    RasMol
(require local installation)
    Molscript (VRML)
(requires installation of a VRML viewer; select preferred view via VRML and generate a mono or stereo PDF format file)
 
  Ligands, Modified Residues, Ions
    MG  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
    POP  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
    TPS  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
 
  Sites
    AC1  [ RasMol ]  +environment [ RasMol ]
    AC2  [ RasMol ]  +environment [ RasMol ]
    AC3  [ RasMol ]  +environment [ RasMol ]
    AC4  [ RasMol ]  +environment [ RasMol ]
    AC5  [ RasMol ]  +environment [ RasMol ]
    AC6  [ RasMol ]  +environment [ RasMol ]
    AC7  [ RasMol ]  +environment [ RasMol ]
    AC8  [ RasMol ]  +environment [ RasMol ]
    AC9  [ RasMol ]  +environment [ RasMol ]
    BC1  [ RasMol ]  +environment [ RasMol ]
    BC2  [ RasMol ]  +environment [ RasMol ]
    BC3  [ RasMol ]  +environment [ RasMol ]
    BC4  [ RasMol ]  +environment [ RasMol ]
    BC5  [ RasMol ]  +environment [ RasMol ]
    BC6  [ RasMol ]  +environment [ RasMol ]
    BC7  [ RasMol ]  +environment [ RasMol ]
    BC8  [ RasMol ]  +environment [ RasMol ]
    BC9  [ RasMol ]  +environment [ RasMol ]
 
  Cis Peptide Bonds
    Asn A:75 - Asp A:76   [ RasMol ]  
    Asn B:75 - Asp B:76   [ RasMol ]  
    Asn C:75 - Asp C:76   [ RasMol ]  
    Asn D:75 - Asp D:76   [ RasMol ]  
    Asn E:75 - Asp E:76   [ RasMol ]  
    Asn F:75 - Asp F:76   [ RasMol ]  
    Lys A:435 - Gly A:436   [ RasMol ]  
    Lys B:435 - Gly B:436   [ RasMol ]  
    Lys C:435 - Gly C:436   [ RasMol ]  
    Lys D:435 - Gly D:436   [ RasMol ]  
    Lys E:435 - Gly E:436   [ RasMol ]  
    Lys F:435 - Gly F:436   [ RasMol ]  
    Val F:208 - Val F:209   [ RasMol ]  
 

(-) Still Images

Jmol
  protein: cartoon or spacefill or dots and stick; nucleic acid: cartoon and stick; ligands: spacefill; active site: stick
[ Asym./Biol. Unit PNG format | Asym./Biol. Unit - sites PNG format ](automatic orientation, automatically generated)
Molscript
  protein, nucleic acid: cartoon; ligands: spacefill; active site: ball and stick
[ mono PDF format | stereo PDF format ](default orientation, automatically generated)

 Databases and Analysis Tools

(-) Databases

Access by PDB/NDB ID
  3nm3
    Family and Domain Information: ProDom | SYSTERS
    General Structural Information: GlycoscienceDB | MMDB | NDB | OCA | PDB | PDBe | PDBj | PDBsum | PDBWiki | PQS | PROTEOPEDIA
    Orientation in Membranes: OPM
    Protein Surface: SURFACE
    Secondary Structure: DSSP (structure derived) | HSSP (homology derived)
    Structural Genomics: GeneCensus
    Structural Neighbours: CE | VAST
    Structure Classification: CATH | Dali | SCOP
    Validation and Original Data: BMRB Data View | BMRB Restraints Grid | EDS | PROCHECK | RECOORD | WHAT_CHECK
 
Access by UniProt ID/Accession number
  Q6FV03_CANGA | Q6FV03
    Comparative Protein Structure Models: ModBase
    Genomic Information: Ensembl
    Protein-protein Interaction: DIP
    Sequence, Family and Domain Information: InterPro | Pfam | SMART | UniProtKB/TrEMBL
 
Access by Enzyme Classificator   (EC Number)
  2.5.1.3
    General Enzyme Information: BRENDA | EC-PDB | Enzyme | IntEnz
    Pathway: KEGG | MetaCyc
  2.7.1.50
    General Enzyme Information: BRENDA | EC-PDB | Enzyme | IntEnz
    Pathway: KEGG | MetaCyc
 
Access by Disease Identifier   (MIM ID)
  (no 'MIM ID' available)
    Disease Information: OMIM
 
Access by GenAge ID
  (no 'GenAge ID' available)
    Age Related Information: GenAge

(-) Analysis Tools

Access by PDB/NDB ID
    Domain Information: XDom
    Interatomic Contacts of Structural Units: CSU
    Ligand-protein Contacts: LPC
    Protein Cavities: castP
    Sequence and Secondary Structure: PDBCartoon
    Structure Alignment: STRAP(Java WebStart application, automatic local installation, requires Java; full application with system access!)
    Structure and Sequence Browser: STING
 
Access by UniProt ID/Accession number
  Q6FV03_CANGA | Q6FV03
    Protein Disorder Prediction: DisEMBL | FoldIndex | GLOBPLOT (for more information see DisProt)

 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/TrEMBL
        Q6FV03_CANGA | Q6FV03: 3nl2 3nl3 3nl5 3nl6 3nm1

(-) Related Entries Specified in the PDB File

3nl2 3nl3 3nl5 3nl6 3nm1