Chain A from PDB Type:PROTEIN Length:505
aligned with Q6FV03_CANGA | Q6FV03 from UniProtKB/TrEMBL Length:540
Alignment length:539
11 21 31 41 51 61 71 81 91 101 111 121 131 141 151 161 171 181 191 201 211 221 231 241 251 261 271 281 291 301 311 321 331 341 351 361 371 381 391 401 411 421 431 441 451 461 471 481 491 501 511 521 531
Q6FV03_CANGA 2 KFSKEQFDYSLYLVTDSGMIPEGKTLYGQVEAGLQNGVTLVQIREKDADTKFFIEEALQIKELCHAHNVPLIINDRIDVAMAIGADGIHVGQDDMPIPMIRKLVGPDMVIGWSVGFPEEVDELSKMGPDMVDYIGVGTLFPTLTKKNPKKAPMGTAGAIRVLDALERNNAHWCRTVGIGGLHPDNIERVLYQCVSSNGKRSLDGICVVSDIIASLDAAKSTKILRGLIDKTDYKFVNIGLSTKNSLTTTDEIQSIISNTLKARPLVQHITNKVHQNFGANVTLALGSSPIMSEIQSEVNDLAAIPHATLLLNTGSVAPPEMLKAAIRAYNDVKRPIVFDPVGYSATETRLLLNNKLLTFGQFSCIKGNSSEILGLAELNKERMKGVDASSGISNELLIQATKIVAFKYKTVAVCTGEFDFIADGTIEGKYSLSKGTNGTSVEDIPCVAVEAGPIEIMGDITASGCSLGSTIACMIGGQPSEGNLFHAVVAGVMLYKAAGKIASEKCNGSGSFQVELIDALYRLTRENTPVTWAPKLTHT 540
SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..hhhhh...eeee..........hhhhhhhhhhhh...eeeee......hhhhhhhhhhhhhhhhh...eeee.hhhhhhhhh..eeee.....hhhhhhhhhh...eeeeee..hhhhhhhhhh......eeee......----------hhhhhhhhhhhhhhhh.....eeeee......hhhhhhhhh..........eeee........hhhhhhhhhhhhhh..................hhhhhhhhhhhhhhhh.eeeee.hhhhhhhhhhhhhhh...ee.....hhhhhhhhh..eeeeee.....hhhhhhhhhhhhhhh...eeee...-..hhhhhhhhhhhh......eeeeehhhhhhhhh.--------------.hhhhhhhhhhhhhhh..eeeee..eeeeee.hhhhh..........hhhhh.eeeee....---------hhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhh.hhhhh..eeee. Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
3nl2 A 2 KFSKEQFDYSLYLVTDSGMIPEGKTLYGQVEAGLQNGVTLVQIREKDADTKFFIEEALQIKELCHAHNVPLIINDRIDVAMAIGADGIHVGQDDMPIPMIRKLVGPDMVIGWSVGFPEEVDELSKMGPDMVDYIGVGTLFPT----------MGTAGAIRVLDALERNNAHWCRTVGIGGLHPDNIERVLYQCVSSNGKRSLDGICVVSDIIASLDAAKSTKILRGLIDKTDYKFVNIGLSTKNSLTTTDEIQSIISNTLKARPLVQHITNKVHQNFGANVTLALGSSPIMSEIQSEVNDLAAIPHATLLLNTGSVAPPEMLKAAIRAYNDVKRPIVFDPVG-SATETRLLLNNKLLTFGQFSCIKGNSSEILGLAEL--------------SNELLIQATKIVAFKYKTVAVCTGEFDFIADGTIEGKYSLSKGTNGTSVEDIPCVAVEAGPI---------GCSLGSTIACMIGGQPSEGNLFHAVVAGVMLYKAAGKIASEKCNGSGSFQVELIDALYRLTRENTPVTWAPKLTHT 540
11 21 31 41 51 61 71 81 91 101 111 121 131 141 | - | 161 171 181 191 201 211 221 231 241 251 261 271 281 291 301 311 321 331 341 | | 351 361 371 | - - | 401 411 421 431 441 451 | - | 471 481 491 501 511 521 531
143 154 343 | 379 394 455 465
345
Chain B from PDB Type:PROTEIN Length:505
aligned with Q6FV03_CANGA | Q6FV03 from UniProtKB/TrEMBL Length:540
Alignment length:539
11 21 31 41 51 61 71 81 91 101 111 121 131 141 151 161 171 181 191 201 211 221 231 241 251 261 271 281 291 301 311 321 331 341 351 361 371 381 391 401 411 421 431 441 451 461 471 481 491 501 511 521 531
Q6FV03_CANGA 2 KFSKEQFDYSLYLVTDSGMIPEGKTLYGQVEAGLQNGVTLVQIREKDADTKFFIEEALQIKELCHAHNVPLIINDRIDVAMAIGADGIHVGQDDMPIPMIRKLVGPDMVIGWSVGFPEEVDELSKMGPDMVDYIGVGTLFPTLTKKNPKKAPMGTAGAIRVLDALERNNAHWCRTVGIGGLHPDNIERVLYQCVSSNGKRSLDGICVVSDIIASLDAAKSTKILRGLIDKTDYKFVNIGLSTKNSLTTTDEIQSIISNTLKARPLVQHITNKVHQNFGANVTLALGSSPIMSEIQSEVNDLAAIPHATLLLNTGSVAPPEMLKAAIRAYNDVKRPIVFDPVGYSATETRLLLNNKLLTFGQFSCIKGNSSEILGLAELNKERMKGVDASSGISNELLIQATKIVAFKYKTVAVCTGEFDFIADGTIEGKYSLSKGTNGTSVEDIPCVAVEAGPIEIMGDITASGCSLGSTIACMIGGQPSEGNLFHAVVAGVMLYKAAGKIASEKCNGSGSFQVELIDALYRLTRENTPVTWAPKLTHT 540
SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..hhhhh...eeee..........hhhhhhhhhhh....eeeee......hhhhhhhhhhhhhhhhh...eeee.hhhhhhhhh..eeee.....hhhhhhhhhh...eeeeee.hhhhhhhhhhh......eeee......----------hhhhhhhhhhhhhhhh.....eeeee......hhhhhhhhh..........eeee........hhhhhhhhhhhhhh..................hhhhhhhhhhhhhhhh.eeeee.hhhhhhhhhhhhhhh...ee.....hhhhhhh....eeeeee.....hhhhhhhhhhhhhhh...eeee.......hhhhhhhhhhh......eeeeehhhhhhhhh.--------------.hhhhhhhhhhhhhhh..eeeee..eeeeee.hhhhh....-.....hhhhh.eeeee....---------hhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhh.hhhhh..eeee. Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
3nl2 B 2 KFSKEQFDYSLYLVTDSGMIPEGKTLYGQVEAGLQNGVTLVQIREKDADTKFFIEEALQIKELCHAHNVPLIINDRIDVAMAIGADGIHVGQDDMPIPMIRKLVGPDMVIGWSVGFPEEVDELSKMGPDMVDYIGVGTLFPT----------MGTAGAIRVLDALERNNAHWCRTVGIGGLHPDNIERVLYQCVSSNGKRSLDGICVVSDIIASLDAAKSTKILRGLIDKTDYKFVNIGLSTKNSLTTTDEIQSIISNTLKARPLVQHITNKVHQNFGANVTLALGSSPIMSEIQSEVNDLAAIPHATLLLNTGSVAPPEMLKAAIRAYNDVKRPIVFDPVGYSATETRLLLNNKLLTFGQFSCIKGNSSEILGLAEL--------------SNELLIQATKIVAFKYKTVAVCTGEFDFIADGTIEGKYSLS-GTNGTSVEDIPCVAVEAGPI---------GCSLGSTIACMIGGQPSEGNLFHAVVAGVMLYKAAGKIASEKCNGSGSFQVELIDALYRLTRENTPVTWAPKLTHT 540
11 21 31 41 51 61 71 81 91 101 111 121 131 141 | - | 161 171 181 191 201 211 221 231 241 251 261 271 281 291 301 311 321 331 341 351 361 371 | - - | 401 411 421 431 | | 441 451 | - | 471 481 491 501 511 521 531
143 154 379 394 434 | 455 465
436
Chain C from PDB Type:PROTEIN Length:498
aligned with Q6FV03_CANGA | Q6FV03 from UniProtKB/TrEMBL Length:540
Alignment length:539
11 21 31 41 51 61 71 81 91 101 111 121 131 141 151 161 171 181 191 201 211 221 231 241 251 261 271 281 291 301 311 321 331 341 351 361 371 381 391 401 411 421 431 441 451 461 471 481 491 501 511 521 531
Q6FV03_CANGA 2 KFSKEQFDYSLYLVTDSGMIPEGKTLYGQVEAGLQNGVTLVQIREKDADTKFFIEEALQIKELCHAHNVPLIINDRIDVAMAIGADGIHVGQDDMPIPMIRKLVGPDMVIGWSVGFPEEVDELSKMGPDMVDYIGVGTLFPTLTKKNPKKAPMGTAGAIRVLDALERNNAHWCRTVGIGGLHPDNIERVLYQCVSSNGKRSLDGICVVSDIIASLDAAKSTKILRGLIDKTDYKFVNIGLSTKNSLTTTDEIQSIISNTLKARPLVQHITNKVHQNFGANVTLALGSSPIMSEIQSEVNDLAAIPHATLLLNTGSVAPPEMLKAAIRAYNDVKRPIVFDPVGYSATETRLLLNNKLLTFGQFSCIKGNSSEILGLAELNKERMKGVDASSGISNELLIQATKIVAFKYKTVAVCTGEFDFIADGTIEGKYSLSKGTNGTSVEDIPCVAVEAGPIEIMGDITASGCSLGSTIACMIGGQPSEGNLFHAVVAGVMLYKAAGKIASEKCNGSGSFQVELIDALYRLTRENTPVTWAPKLTHT 540
SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..hhhhh...eeee..........hhhhhhhhhhhh...eeeee.--...hhhhhhhhhhhhhhhhh...eeee.hhhhhhhh...eeee.....hhhhhhhhhh...eeeeee..hhhhhhhhhh......eeee......----------hhhhhhhhhhhhhhhh.....eeeee......hhhhhhhhh..........eeee........hhhhhhhhhhhhhh..................hhhhhhhhhhhhhhhh.eeeee..-hhhhhhhhhhhhh...ee.....hhhhhhh....eeeeee.....hhhhhhhhhhhhhhh...eeee.....-hhhhhhhhhhhh......eeeeehhhhhhhhh.--------------.hhhhhhhhhhhhhhh..eeeee...eeeee.hhhhh..........hhhhh.eeeee-------------hhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhh.hhhhh..eeee. Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
3nl2 C 2 KFSKEQFDYSLYLVTDSGMIPEGKTLYGQVEAGLQNGVTLVQIRE--ADTKFFIEEALQIKELCHAHNVPLIINDRIDVAMAIGADGIHVGQDDMPIPMIRKLVGPDMVIGWSVGFPEEVDELSKMGPDMVDYIGVGTLFPT----------MGTAGAIRVLDALERNNAHWCRTVGIGGLHPDNIERVLYQCVSSNGKRSLDGICVVSDIIASLDAAKSTKILRGLIDKTDYKFVNIGLSTKNSLTTTDEIQSIISNTLKARPLVQHITN-VHQNFGANVTLALGSSPIMSEIQSEVNDLAAIPHATLLLNTGSVAPPEMLKAAIRAYNDVKRPIVFDPVGYS-TETRLLLNNKLLTFGQFSCIKGNSSEILGLAEL--------------SNELLIQATKIVAFKYKTVAVCTGEFDFIADGTIEGKYSLSKGTNGTSVEDIPCVAVE-------------GCSLGSTIACMIGGQPSEGNLFHAVVAGVMLYKAAGKIASEKCNGSGSFQVELIDALYRLTRENTPVTWAPKLTHT 540
11 21 31 41 | |51 61 71 81 91 101 111 121 131 141 | - | 161 171 181 191 201 211 221 231 241 251 261 271| | 281 291 301 311 321 331 341 | | 351 361 371 | - - | 401 411 421 431 441 451 - | 471 481 491 501 511 521 531
46 49 143 154 272 | 345 | 379 394 451 465
274 347
Chain D from PDB Type:PROTEIN Length:501
aligned with Q6FV03_CANGA | Q6FV03 from UniProtKB/TrEMBL Length:540
Alignment length:539
11 21 31 41 51 61 71 81 91 101 111 121 131 141 151 161 171 181 191 201 211 221 231 241 251 261 271 281 291 301 311 321 331 341 351 361 371 381 391 401 411 421 431 441 451 461 471 481 491 501 511 521 531
Q6FV03_CANGA 2 KFSKEQFDYSLYLVTDSGMIPEGKTLYGQVEAGLQNGVTLVQIREKDADTKFFIEEALQIKELCHAHNVPLIINDRIDVAMAIGADGIHVGQDDMPIPMIRKLVGPDMVIGWSVGFPEEVDELSKMGPDMVDYIGVGTLFPTLTKKNPKKAPMGTAGAIRVLDALERNNAHWCRTVGIGGLHPDNIERVLYQCVSSNGKRSLDGICVVSDIIASLDAAKSTKILRGLIDKTDYKFVNIGLSTKNSLTTTDEIQSIISNTLKARPLVQHITNKVHQNFGANVTLALGSSPIMSEIQSEVNDLAAIPHATLLLNTGSVAPPEMLKAAIRAYNDVKRPIVFDPVGYSATETRLLLNNKLLTFGQFSCIKGNSSEILGLAELNKERMKGVDASSGISNELLIQATKIVAFKYKTVAVCTGEFDFIADGTIEGKYSLSKGTNGTSVEDIPCVAVEAGPIEIMGDITASGCSLGSTIACMIGGQPSEGNLFHAVVAGVMLYKAAGKIASEKCNGSGSFQVELIDALYRLTRENTPVTWAPKLTHT 540
SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..hhhhh...eeee..........hhhhhhhhhhhh...eeeee....hhhhhhhhhhhhhhhhhhh...eeee.hhhhhhhhh..eeee.....hhhhhhhhhh...eeeeee..hhhhhhhhhh......eeee......----------hhhhhhhhhhhhhhhh.....eeeee......hhhhhhhhh..........eeee........hhhhhhhhhhhhhh..................hhhhhhhhhhhhhhhh.eeeee..-hhhhhhhhhhhhh...ee.....hhhhhhhhh..eeeeee.....hhhhhhhhhhhhhhh...eeee...-..hhhhhhhhhhhh......eeeeehhhhhhhhh.--------------.hhhhhhhhhhhhhhh..eeeee...eeeee.hhhhh..........hhhhh.eeeee.------------hhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhh.hhhhh..eeee. Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
3nl2 D 2 KFSKEQFDYSLYLVTDSGMIPEGKTLYGQVEAGLQNGVTLVQIREKDADTKFFIEEALQIKELCHAHNVPLIINDRIDVAMAIGADGIHVGQDDMPIPMIRKLVGPDMVIGWSVGFPEEVDELSKMGPDMVDYIGVGTLFPT----------MGTAGAIRVLDALERNNAHWCRTVGIGGLHPDNIERVLYQCVSSNGKRSLDGICVVSDIIASLDAAKSTKILRGLIDKTDYKFVNIGLSTKNSLTTTDEIQSIISNTLKARPLVQHITN-VHQNFGANVTLALGSSPIMSEIQSEVNDLAAIPHATLLLNTGSVAPPEMLKAAIRAYNDVKRPIVFDPVG-SATETRLLLNNKLLTFGQFSCIKGNSSEILGLAEL--------------SNELLIQATKIVAFKYKTVAVCTGEFDFIADGTIEGKYSLSKGTNGTSVEDIPCVAVEA------------GCSLGSTIACMIGGQPSEGNLFHAVVAGVMLYKAAGKIASEKCNGSGSFQVELIDALYRLTRENTPVTWAPKLTHT 540
11 21 31 41 51 61 71 81 91 101 111 121 131 141 | - | 161 171 181 191 201 211 221 231 241 251 261 271| | 281 291 301 311 321 331 341 | | 351 361 371 | - - | 401 411 421 431 441 451| - | 471 481 491 501 511 521 531
143 154 272 | 343 | 379 394 452 465
274 345
Chain E from PDB Type:PROTEIN Length:503
aligned with Q6FV03_CANGA | Q6FV03 from UniProtKB/TrEMBL Length:540
Alignment length:539
11 21 31 41 51 61 71 81 91 101 111 121 131 141 151 161 171 181 191 201 211 221 231 241 251 261 271 281 291 301 311 321 331 341 351 361 371 381 391 401 411 421 431 441 451 461 471 481 491 501 511 521 531
Q6FV03_CANGA 2 KFSKEQFDYSLYLVTDSGMIPEGKTLYGQVEAGLQNGVTLVQIREKDADTKFFIEEALQIKELCHAHNVPLIINDRIDVAMAIGADGIHVGQDDMPIPMIRKLVGPDMVIGWSVGFPEEVDELSKMGPDMVDYIGVGTLFPTLTKKNPKKAPMGTAGAIRVLDALERNNAHWCRTVGIGGLHPDNIERVLYQCVSSNGKRSLDGICVVSDIIASLDAAKSTKILRGLIDKTDYKFVNIGLSTKNSLTTTDEIQSIISNTLKARPLVQHITNKVHQNFGANVTLALGSSPIMSEIQSEVNDLAAIPHATLLLNTGSVAPPEMLKAAIRAYNDVKRPIVFDPVGYSATETRLLLNNKLLTFGQFSCIKGNSSEILGLAELNKERMKGVDASSGISNELLIQATKIVAFKYKTVAVCTGEFDFIADGTIEGKYSLSKGTNGTSVEDIPCVAVEAGPIEIMGDITASGCSLGSTIACMIGGQPSEGNLFHAVVAGVMLYKAAGKIASEKCNGSGSFQVELIDALYRLTRENTPVTWAPKLTHT 540
SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..hhhhh...eeee..........hhhhhhhhhhhh...eeeee....hhhhhhhhhhhhhhhhhhh...eeee.hhhhhhhhh..eeee.....hhhhhhhhhh...eeeeee.hhhhhhhhhhh......eeee......----------hhhhhhhhhhhhhhhh.....eeeee......hhhhhhhhh..........eeee........hhhhhhhhhhhhhh..................hhhhhhhhhhhhhhhh.eeeee..-hhhhhhhhhhhhh...ee.....hhhhhhh....eeeeee.....hhhhhhhhhhhhhhh...eeee....--hhhhhhhhhhhh......eeeeehhhhhhhhh.--------------.hhhhhhhhhhhhhhh..eeeee..eeeeee.hhhhh..........hhhhh.eeeee....---------hhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhh.hhhhh..eeee. Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
3nl2 E 2 KFSKEQFDYSLYLVTDSGMIPEGKTLYGQVEAGLQNGVTLVQIREKDADTKFFIEEALQIKELCHAHNVPLIINDRIDVAMAIGADGIHVGQDDMPIPMIRKLVGPDMVIGWSVGFPEEVDELSKMGPDMVDYIGVGTLFPT----------MGTAGAIRVLDALERNNAHWCRTVGIGGLHPDNIERVLYQCVSSNGKRSLDGICVVSDIIASLDAAKSTKILRGLIDKTDYKFVNIGLSTKNSLTTTDEIQSIISNTLKARPLVQHITN-VHQNFGANVTLALGSSPIMSEIQSEVNDLAAIPHATLLLNTGSVAPPEMLKAAIRAYNDVKRPIVFDPVGY--TETRLLLNNKLLTFGQFSCIKGNSSEILGLAEL--------------SNELLIQATKIVAFKYKTVAVCTGEFDFIADGTIEGKYSLSKGTNGTSVEDIPCVAVEAGPI---------GCSLGSTIACMIGGQPSEGNLFHAVVAGVMLYKAAGKIASEKCNGSGSFQVELIDALYRLTRENTPVTWAPKLTHT 540
11 21 31 41 51 61 71 81 91 101 111 121 131 141 | - | 161 171 181 191 201 211 221 231 241 251 261 271| | 281 291 301 311 321 331 341 | | 351 361 371 | - - | 401 411 421 431 441 451 | - | 471 481 491 501 511 521 531
143 154 272 | 344 | 379 394 455 465
274 347
Chain F from PDB Type:PROTEIN Length:494
aligned with Q6FV03_CANGA | Q6FV03 from UniProtKB/TrEMBL Length:540
Alignment length:539
11 21 31 41 51 61 71 81 91 101 111 121 131 141 151 161 171 181 191 201 211 221 231 241 251 261 271 281 291 301 311 321 331 341 351 361 371 381 391 401 411 421 431 441 451 461 471 481 491 501 511 521 531
Q6FV03_CANGA 2 KFSKEQFDYSLYLVTDSGMIPEGKTLYGQVEAGLQNGVTLVQIREKDADTKFFIEEALQIKELCHAHNVPLIINDRIDVAMAIGADGIHVGQDDMPIPMIRKLVGPDMVIGWSVGFPEEVDELSKMGPDMVDYIGVGTLFPTLTKKNPKKAPMGTAGAIRVLDALERNNAHWCRTVGIGGLHPDNIERVLYQCVSSNGKRSLDGICVVSDIIASLDAAKSTKILRGLIDKTDYKFVNIGLSTKNSLTTTDEIQSIISNTLKARPLVQHITNKVHQNFGANVTLALGSSPIMSEIQSEVNDLAAIPHATLLLNTGSVAPPEMLKAAIRAYNDVKRPIVFDPVGYSATETRLLLNNKLLTFGQFSCIKGNSSEILGLAELNKERMKGVDASSGISNELLIQATKIVAFKYKTVAVCTGEFDFIADGTIEGKYSLSKGTNGTSVEDIPCVAVEAGPIEIMGDITASGCSLGSTIACMIGGQPSEGNLFHAVVAGVMLYKAAGKIASEKCNGSGSFQVELIDALYRLTRENTPVTWAPKLTHT 540
SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains (1) ----------TMP-TENI-3nl2F07 F:12-212 --------------------------------------------HK-3nl2F01 F:257 -527 ------------- Pfam domains (1)
Pfam domains (2) ----------TMP-TENI-3nl2F08 F:12-212 --------------------------------------------HK-3nl2F02 F:257 -527 ------------- Pfam domains (2)
Pfam domains (3) ----------TMP-TENI-3nl2F09 F:12-212 --------------------------------------------HK-3nl2F03 F:257 -527 ------------- Pfam domains (3)
Pfam domains (4) ----------TMP-TENI-3nl2F10 F:12-212 --------------------------------------------HK-3nl2F04 F:257 -527 ------------- Pfam domains (4)
Pfam domains (5) ----------TMP-TENI-3nl2F11 F:12-212 --------------------------------------------HK-3nl2F05 F:257 -527 ------------- Pfam domains (5)
Pfam domains (6) ----------TMP-TENI-3nl2F12 F:12-212 --------------------------------------------HK-3nl2F06 F:257 -527 ------------- Pfam domains (6)
Sec.struct. author ..hhhhh...eeee..........hhhhhhhhhhhh.-.eeee.---...hhhhhhhhhhhhhhhhh...eeee.hhhhhhhhh..eeee.....hhhhhhhhh--..eeeeee.hhhhhhhhhhh......eeee.....-----------hhhhhhhhhhhhhhhh.....eeeee......hhhhhhhhh..........eeee........hhhhhhhhhhhhhh..................hhhhhhhhhhhhhhhh.eeeee..-hhhhhhhhhhhhh...ee.....hhhhhhhhh..eeeeee.....hhhhhhhhhhhhhhh...eeee....--hhhhhhhhhhhh......eeeeehhhhhhhhh.--------------.hhhhhhhhhhhhhhh..eeeee..eeeeee.hhhhh..........hhhhh.eeeee....-----------hhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhh.hhhhh..eeee. Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
3nl2 F 2 KFSKEQFDYSLYLVTDSGMIPEGKTLYGQVEAGLQNG-TLVQIR---ADTKFFIEEALQIKELCHAHNVPLIINDRIDVAMAIGADGIHVGQDDMPIPMIRKLV--DMVIGWSVGFPEEVDELSKMGPDMVDYIGVGTLFP-----------MGTAGAIRVLDALERNNAHWCRTVGIGGLHPDNIERVLYQCVSSNGKRSLDGICVVSDIIASLDAAKSTKILRGLIDKTDYKFVNIGLSTKNSLTTTDEIQSIISNTLKARPLVQHITN-VHQNFGANVTLALGSSPIMSEIQSEVNDLAAIPHATLLLNTGSVAPPEMLKAAIRAYNDVKRPIVFDPVGY--TETRLLLNNKLLTFGQFSCIKGNSSEILGLAEL--------------SNELLIQATKIVAFKYKTVAVCTGEFDFIADGTIEGKYSLSKGTNGTSVEDIPCVAVEAGPI-----------SLGSTIACMIGGQPSEGNLFHAVVAGVMLYKAAGKIASEKCNGSGSFQVELIDALYRLTRENTPVTWAPKLTHT 540
11 21 31 | 41 | |51 61 71 81 91 101 | |111 121 131 141| - | 161 171 181 191 201 211 221 231 241 251 261 271| | 281 291 301 311 321 331 341 | | 351 361 371 | - - | 401 411 421 431 441 451 | - | 471 481 491 501 511 521 531
38 | 45 49 105 | 142 154 272 | 344 | 379 394 455 467
40 108 274 347
Legend: |
|
→ Mismatch |
(orange background) |
|
- |
→ Gap |
(green background, '-', border residues have a numbering label) |
|
|
→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
|
x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
|
extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |