Chain A from PDB Type:PROTEIN Length:180
aligned with CLPP_BACSU | P80244 from UniProtKB/Swiss-Prot Length:197
Alignment length:190
13 23 33 43 53 63 73 83 93 103 113 123 133 143 153 163 173 183 193
CLPP_BACSU 4 IPTVIEQTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLAAEDPEKEISLYINSPGGSITAGMAIYDTMQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAAKRILLLRDKLNKVLAERTGQPLEVIERDTDRDNFKSAEEALEYGLIDKILTHT 193
SCOP domains d3kt ha_ A: automated matches SCOP domains
CATH domains 3kth A00 A:3-192 2-enoyl-CoA Hydratase; Chain A, domain 1 CATH domains
Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ....----------.hhhhhhhhh.eeee....hhhhhhhhhhhhhhhhhhh....eeeeeee...hhhhhhhhhhhhhhh...eeeeeeeeeehhhhhhhhhh....eee....eeee.........hhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhh...eeeehhhhhhhh...ee.... Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE --------------------------------------------------------------------------------------CLP_PROTEASE----------CLP_PROTEASE_H-------------------------------------------------------------------- PROSITE
Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
3kth A 3 IPTV----------YDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLAAEDPEKEISLYINSPGGSITAGMAIYDTMQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAAKRILLLRDKLNKVLAERTGQPLEVIERDTDRDNFKSAEEALEYGLIDKILTHL 192
| - | 22 32 42 52 62 72 82 92 102 112 122 132 142 152 162 172 182 192
6 17
Chain B from PDB Type:PROTEIN Length:182
aligned with CLPP_BACSU | P80244 from UniProtKB/Swiss-Prot Length:197
Alignment length:191
13 23 33 43 53 63 73 83 93 103 113 123 133 143 153 163 173 183 193
CLPP_BACSU 4 IPTVIEQTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLAAEDPEKEISLYINSPGGSITAGMAIYDTMQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAAKRILLLRDKLNKVLAERTGQPLEVIERDTDRDNFKSAEEALEYGLIDKILTHTE 194
SCOP domains d3kth b_ B: automated matches SCOP domains
CATH domains 3kthB 00 B:3-193 2-enoyl-CoA Hydratase; Chain A, domain 1 CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .....---------.hhhhhhhhh.eeee....hhhhhhhhhhhhhhhhhhh....eeeeeee...hhhhhhhhhhhhhhh...eeeeeeeeeehhhhhhhhhh....eee....eeee.........hhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhh...eeeehhhhhhhh...ee..... Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE --------------------------------------------------------------------------------------CLP_PROTEASE----------CLP_PROTEASE_H--------------------------------------------------------------------- PROSITE
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
3kth B 3 IPTVI---------YDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLAAEDPEKEISLYINSPGGSITAGMAIYDTMQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAAKRILLLRDKLNKVLAERTGQPLEVIERDTDRDNFKSAEEALEYGLIDKILTHLE 193
| - | 22 32 42 52 62 72 82 92 102 112 122 132 142 152 162 172 182 192
7 17
Chain C from PDB Type:PROTEIN Length:180
aligned with CLPP_BACSU | P80244 from UniProtKB/Swiss-Prot Length:197
Alignment length:190
13 23 33 43 53 63 73 83 93 103 113 123 133 143 153 163 173 183 193
CLPP_BACSU 4 IPTVIEQTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLAAEDPEKEISLYINSPGGSITAGMAIYDTMQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAAKRILLLRDKLNKVLAERTGQPLEVIERDTDRDNFKSAEEALEYGLIDKILTHT 193
SCOP domains d3kt hc_ C: automated matches SCOP domains
CATH domains 3kth C00 C:3-192 2-enoyl-CoA Hydratase; Chain A, domain 1 CATH domains
Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ....----------.hhhhhhhhh.eeee....hhhhhhhhhhhhhhhhhhh....eeeeeee...hhhhhhhhhhhhhhh...eeeeeeeeeehhhhhhhhhh....eee....eeee.........hhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhh...eeeehhhhhhhh...ee.... Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE --------------------------------------------------------------------------------------CLP_PROTEASE----------CLP_PROTEASE_H-------------------------------------------------------------------- PROSITE
Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
3kth C 3 IPTV----------YDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLAAEDPEKEISLYINSPGGSITAGMAIYDTMQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAAKRILLLRDKLNKVLAERTGQPLEVIERDTDRDNFKSAEEALEYGLIDKILTHL 192
| - | 22 32 42 52 62 72 82 92 102 112 122 132 142 152 162 172 182 192
6 17
Chain D from PDB Type:PROTEIN Length:181
aligned with CLPP_BACSU | P80244 from UniProtKB/Swiss-Prot Length:197
Alignment length:191
13 23 33 43 53 63 73 83 93 103 113 123 133 143 153 163 173 183 193
CLPP_BACSU 4 IPTVIEQTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLAAEDPEKEISLYINSPGGSITAGMAIYDTMQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAAKRILLLRDKLNKVLAERTGQPLEVIERDTDRDNFKSAEEALEYGLIDKILTHTE 194
SCOP domains d3kt hd_ D: automated matches SCOP domains
CATH domains 3kth D00 D:3-193 2-enoyl-CoA Hydratase; Chain A, domain 1 CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ....----------.hhhhhhhhh.eeee....hhhhhhhhhhhhhhhhhhh....eeeeeee...hhhhhhhhhhhhhhh...eeeeeeeeeehhhhhhhhhh....eee....eeee.........hhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhh...eeeehhhhhhhh...ee..... Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE --------------------------------------------------------------------------------------CLP_PROTEASE----------CLP_PROTEASE_H--------------------------------------------------------------------- PROSITE
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
3kth D 3 IPTV----------YDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLAAEDPEKEISLYINSPGGSITAGMAIYDTMQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAAKRILLLRDKLNKVLAERTGQPLEVIERDTDRDNFKSAEEALEYGLIDKILTHLE 193
| - | 22 32 42 52 62 72 82 92 102 112 122 132 142 152 162 172 182 192
6 17
Chain E from PDB Type:PROTEIN Length:181
aligned with CLPP_BACSU | P80244 from UniProtKB/Swiss-Prot Length:197
Alignment length:191
13 23 33 43 53 63 73 83 93 103 113 123 133 143 153 163 173 183 193
CLPP_BACSU 4 IPTVIEQTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLAAEDPEKEISLYINSPGGSITAGMAIYDTMQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAAKRILLLRDKLNKVLAERTGQPLEVIERDTDRDNFKSAEEALEYGLIDKILTHTE 194
SCOP domains d3kt he_ E: automated matches SCOP domains
CATH domains 3kth E00 E:3-193 2-enoyl-CoA Hydratase; Chain A, domain 1 CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ....----------.hhhhhhhhh.eeee....hhhhhhhhhhhhhhhhhhh....eeeeeee...hhhhhhhhhhhhhhh...eeeeeeeeeehhhhhhhhhh....eee....eeee.........hhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhh...eeeehhhhhhhh...ee..... Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE --------------------------------------------------------------------------------------CLP_PROTEASE----------CLP_PROTEASE_H--------------------------------------------------------------------- PROSITE
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
3kth E 3 IPTV----------YDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLAAEDPEKEISLYINSPGGSITAGMAIYDTMQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAAKRILLLRDKLNKVLAERTGQPLEVIERDTDRDNFKSAEEALEYGLIDKILTHLE 193
| - | 22 32 42 52 62 72 82 92 102 112 122 132 142 152 162 172 182 192
6 17
Chain F from PDB Type:PROTEIN Length:182
aligned with CLPP_BACSU | P80244 from UniProtKB/Swiss-Prot Length:197
Alignment length:191
13 23 33 43 53 63 73 83 93 103 113 123 133 143 153 163 173 183 193
CLPP_BACSU 4 IPTVIEQTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLAAEDPEKEISLYINSPGGSITAGMAIYDTMQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAAKRILLLRDKLNKVLAERTGQPLEVIERDTDRDNFKSAEEALEYGLIDKILTHTE 194
SCOP domains d3kth f_ F: automated matches SCOP domains
CATH domains 3kthF 00 F:3-193 2-enoyl-CoA Hydratase; Chain A, domain 1 CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .....---------.hhhhhhhhh.eeee....hhhhhhhhhhhhhhhhhhh....eeeeeee...hhhhhhhhhhhhhhh...eeeeeeeeeehhhhhhhhhh....eee....eeee.........hhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhh...eeeehhhhhhhh...ee..... Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE --------------------------------------------------------------------------------------CLP_PROTEASE----------CLP_PROTEASE_H--------------------------------------------------------------------- PROSITE
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
3kth F 3 IPTVI---------YDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLAAEDPEKEISLYINSPGGSITAGMAIYDTMQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAAKRILLLRDKLNKVLAERTGQPLEVIERDTDRDNFKSAEEALEYGLIDKILTHLE 193
| - | 22 32 42 52 62 72 82 92 102 112 122 132 142 152 162 172 182 192
7 17
Chain G from PDB Type:PROTEIN Length:181
aligned with CLPP_BACSU | P80244 from UniProtKB/Swiss-Prot Length:197
Alignment length:191
13 23 33 43 53 63 73 83 93 103 113 123 133 143 153 163 173 183 193
CLPP_BACSU 4 IPTVIEQTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLAAEDPEKEISLYINSPGGSITAGMAIYDTMQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAAKRILLLRDKLNKVLAERTGQPLEVIERDTDRDNFKSAEEALEYGLIDKILTHTE 194
SCOP domains d3kt hg_ G: automated matches SCOP domains
CATH domains 3kth G00 G:3-193 2-enoyl-CoA Hydratase; Chain A, domain 1 CATH domains
Pfam domains (1) --------------CLP_protease-3kthG01 G:17-191 -- Pfam domains (1)
Pfam domains (2) --------------CLP_protease-3kthG02 G:17-191 -- Pfam domains (2)
Pfam domains (3) --------------CLP_protease-3kthG03 G:17-191 -- Pfam domains (3)
Pfam domains (4) --------------CLP_protease-3kthG04 G:17-191 -- Pfam domains (4)
Pfam domains (5) --------------CLP_protease-3kthG05 G:17-191 -- Pfam domains (5)
Pfam domains (6) --------------CLP_protease-3kthG06 G:17-191 -- Pfam domains (6)
Pfam domains (7) --------------CLP_protease-3kthG07 G:17-191 -- Pfam domains (7)
Sec.struct. author ....----------.hhhhhhhhh.eeee....hhhhhhhhhhhhhhhhhhh....eeeeeee...hhhhhhhhhhhhhhh...eeeeeeeeeehhhhhhhhhh....eee....eeee.........hhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhh...eeeehhhhhhhh...ee..... Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE --------------------------------------------------------------------------------------CLP_PROTEASE----------CLP_PROTEASE_H--------------------------------------------------------------------- PROSITE
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
3kth G 3 IPTV----------YDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLAAEDPEKEISLYINSPGGSITAGMAIYDTMQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAAKRILLLRDKLNKVLAERTGQPLEVIERDTDRDNFKSAEEALEYGLIDKILTHLE 193
| - | 22 32 42 52 62 72 82 92 102 112 122 132 142 152 162 172 182 192
6 17
Legend: |
|
→ Mismatch |
(orange background) |
|
- |
→ Gap |
(green background, '-', border residues have a numbering label) |
|
|
→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
|
x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
|
extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |