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3KTH
Asym. Unit
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Asym.Unit (199 KB)
Biol.Unit 1 (193 KB)
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(1)
Title
:
STRUCTURE OF CLPP FROM BACILLUS SUBTILIS IN ORTHOROMBIC CRYSTAL FORM
Authors
:
B. -G. Lee, H. Brotz-Oesterhelt, H. K. Song
Date
:
25 Nov 09 (Deposition) - 23 Mar 10 (Release) - 03 Nov 10 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
3.00
Chains
:
Asym. Unit : A,B,C,D,E,F,G
Biol. Unit 1: A,B,C,D,E,F,G (1x)
Keywords
:
Hydrolase, Atp-Binding, Nucleotide-Binding, Protease, Serine Protease, Stress Response
(Keyword Search:
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Reference
:
B. -G. Lee, E. Y. Park, K. -E. Lee, H. Jeon, K. H. Sung, H. Paulsen, H. Rubsamen-Schaeff, H. Brotz-Oesterhelt, H. K. Song
Structures Of Clpp In Complex With Acyldepsipeptide Antibiotics Reveal Its Activation Mechanism
Nat. Struct. Mol. Biol. V. 17 471 2010
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Hetero Components
(0, 0)
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Sites
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PROSITE Patterns/Profiles
(2, 14)
Info
All PROSITE Patterns/Profiles
1: CLP_PROTEASE_SER (A:89-100,B:89-100,C:89-100,D:89-10...)
2: CLP_PROTEASE_HIS (A:111-124,B:111-124,C:111-124,D:11...)
;
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PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
CLP_PROTEASE_SER
PS00381
Endopeptidase Clp serine active site.
CLPP_BACSU
90-101
7
A:89-100
B:89-100
C:89-100
D:89-100
E:89-100
F:89-100
G:89-100
2
CLP_PROTEASE_HIS
PS00382
Endopeptidase Clp histidine active site.
CLPP_BACSU
112-125
7
A:111-124
B:111-124
C:111-124
D:111-124
E:111-124
F:111-124
G:111-124
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Exons
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(1, 7)
Info
All SCOP Domains
1a: SCOP_d3ktha_ (A:)
1b: SCOP_d3kthb_ (B:)
1c: SCOP_d3kthc_ (C:)
1d: SCOP_d3kthd_ (D:)
1e: SCOP_d3kthe_ (E:)
1f: SCOP_d3kthf_ (F:)
1g: SCOP_d3kthg_ (G:)
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Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
ClpP/crotonase
(207)
Superfamily
:
ClpP/crotonase
(207)
Family
:
Clp protease, ClpP subunit
(31)
Protein domain
:
automated matches
(16)
Bacillus subtilis [TaxId: 1423]
(5)
1a
d3ktha_
A:
1b
d3kthb_
B:
1c
d3kthc_
C:
1d
d3kthd_
D:
1e
d3kthe_
E:
1f
d3kthf_
F:
1g
d3kthg_
G:
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CATH Domains
(1, 7)
Info
all CATH domains
1a: CATH_3kthB00 (B:3-193)
1b: CATH_3kthF00 (F:3-193)
1c: CATH_3kthD00 (D:3-193)
1d: CATH_3kthE00 (E:3-193)
1e: CATH_3kthG00 (G:3-193)
1f: CATH_3kthA00 (A:3-192)
1g: CATH_3kthC00 (C:3-192)
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Class
:
Alpha Beta
(26913)
Architecture
:
Alpha-Beta Complex
(3881)
Topology
:
2-enoyl-CoA Hydratase; Chain A, domain 1
(89)
Homologous Superfamily
:
2-enoyl-CoA Hydratase; Chain A, domain 1
(89)
Bacillus subtilis. Organism_taxid: 1423.
(5)
1a
3kthB00
B:3-193
1b
3kthF00
F:3-193
1c
3kthD00
D:3-193
1d
3kthE00
E:3-193
1e
3kthG00
G:3-193
1f
3kthA00
A:3-192
1g
3kthC00
C:3-192
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Pfam Domains
(1, 7)
Info
all PFAM domains
1a: PFAM_CLP_protease_3kthG01 (G:17-191)
1b: PFAM_CLP_protease_3kthG02 (G:17-191)
1c: PFAM_CLP_protease_3kthG03 (G:17-191)
1d: PFAM_CLP_protease_3kthG04 (G:17-191)
1e: PFAM_CLP_protease_3kthG05 (G:17-191)
1f: PFAM_CLP_protease_3kthG06 (G:17-191)
1g: PFAM_CLP_protease_3kthG07 (G:17-191)
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Clan
:
ClpP_crotonase
(88)
Family
:
CLP_protease
(18)
Bacillus subtilis
(5)
1a
CLP_protease-3kthG01
G:17-191
1b
CLP_protease-3kthG02
G:17-191
1c
CLP_protease-3kthG03
G:17-191
1d
CLP_protease-3kthG04
G:17-191
1e
CLP_protease-3kthG05
G:17-191
1f
CLP_protease-3kthG06
G:17-191
1g
CLP_protease-3kthG07
G:17-191
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Asym.Unit (199 KB)
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