Chain A from PDB Type:PROTEIN Length:188
aligned with CLPP_BACSU | P80244 from UniProtKB/Swiss-Prot Length:197
Alignment length:196
197
13 23 33 43 53 63 73 83 93 103 113 123 133 143 153 163 173 183 193 |
CLPP_BACSU 4 IPTVIEQTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLAAEDPEKEISLYINSPGGSITAGMAIYDTMQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAAKRILLLRDKLNKVLAERTGQPLEVIERDTDRDNFKSAEEALEYGLIDKILTHTEDKK-- -
SCOP domains d3ktg a_ A: automated matches SCOP domains
CATH domains 3ktgA 00 A:3-198 2-enoyl-CoA Hydratase; Chain A, domain 1 CATH domains
Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..ee.--------.eehhhhhhh..eeee....hhhhhhhhhhhhhhhhhhh....eeeeeee...hhhhhhhhhhhhhhh...eeeeeeeeeehhhhhhhhh.....eee....eeee.........hhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhh...eeeehhhhhhhh...ee.......... Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE --------------------------------------------------------------------------------------CLP_PROTEASE----------CLP_PROTEASE_H-------------------------------------------------------------------------- PROSITE
Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
3ktg A 3 IPTVI--------AYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLAAEDPEKEISLYINSPGGSITAGMAIYDTMQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAAKRILLLRDKLNKVLAERTGQPLEVIERDTDRDNFKSAEEALEYGLIDKILTHLEHHHHH 198
| - | 22 32 42 52 62 72 82 92 102 112 122 132 142 152 162 172 182 192
7 16
Chain B from PDB Type:PROTEIN Length:188
aligned with CLPP_BACSU | P80244 from UniProtKB/Swiss-Prot Length:197
Alignment length:196
197
13 23 33 43 53 63 73 83 93 103 113 123 133 143 153 163 173 183 193 |
CLPP_BACSU 4 IPTVIEQTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLAAEDPEKEISLYINSPGGSITAGMAIYDTMQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAAKRILLLRDKLNKVLAERTGQPLEVIERDTDRDNFKSAEEALEYGLIDKILTHTEDKK-- -
SCOP domains d3ktg b_ B: automated matches SCOP domains
CATH domains 3ktgB 00 B:3-198 2-enoyl-CoA Hydratase; Chain A, domain 1 CATH domains
Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .....--------..hhhhhhhhh.eeee....hhhhhhhhhhhhhhhhhhh....eeeeeee...hhhhhhhhhhhhhhh...eeeeeeeeeehhhhhhhhh.....eee....eeee.........hhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhh...eeeehhhhhhhh...ee.......... Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE --------------------------------------------------------------------------------------CLP_PROTEASE----------CLP_PROTEASE_H-------------------------------------------------------------------------- PROSITE
Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
3ktg B 3 IPTVI--------AYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLAAEDPEKEISLYINSPGGSITAGMAIYDTMQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAAKRILLLRDKLNKVLAERTGQPLEVIERDTDRDNFKSAEEALEYGLIDKILTHLEHHHHH 198
| - | 22 32 42 52 62 72 82 92 102 112 122 132 142 152 162 172 182 192
7 16
Chain C from PDB Type:PROTEIN Length:188
aligned with CLPP_BACSU | P80244 from UniProtKB/Swiss-Prot Length:197
Alignment length:196
197
13 23 33 43 53 63 73 83 93 103 113 123 133 143 153 163 173 183 193 |
CLPP_BACSU 4 IPTVIEQTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLAAEDPEKEISLYINSPGGSITAGMAIYDTMQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAAKRILLLRDKLNKVLAERTGQPLEVIERDTDRDNFKSAEEALEYGLIDKILTHTEDKK-- -
SCOP domains d3ktg c_ C: automated matches SCOP domains
CATH domains 3ktgC 00 C:3-198 2-enoyl-CoA Hydratase; Chain A, domain 1 CATH domains
Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..ee.--------.eehhhhhhhh.eeee....hhhhhhhhhhhhhhhhhhh....eeeeeee...hhhhhhhhhhhhhhh...eeeeeeeeeehhhhhhhhh.....eee....eeee.........hhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhh...eeeehhhhhhhh...ee.......... Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE --------------------------------------------------------------------------------------CLP_PROTEASE----------CLP_PROTEASE_H-------------------------------------------------------------------------- PROSITE
Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
3ktg C 3 IPTVI--------AYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLAAEDPEKEISLYINSPGGSITAGMAIYDTMQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAAKRILLLRDKLNKVLAERTGQPLEVIERDTDRDNFKSAEEALEYGLIDKILTHLEHHHHH 198
| - | 22 32 42 52 62 72 82 92 102 112 122 132 142 152 162 172 182 192
7 16
Chain D from PDB Type:PROTEIN Length:188
aligned with CLPP_BACSU | P80244 from UniProtKB/Swiss-Prot Length:197
Alignment length:196
197
13 23 33 43 53 63 73 83 93 103 113 123 133 143 153 163 173 183 193 |
CLPP_BACSU 4 IPTVIEQTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLAAEDPEKEISLYINSPGGSITAGMAIYDTMQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAAKRILLLRDKLNKVLAERTGQPLEVIERDTDRDNFKSAEEALEYGLIDKILTHTEDKK-- -
SCOP domains d3ktg d_ D: automated matches SCOP domains
CATH domains 3ktgD 00 D:3-198 2-enoyl-CoA Hydratase; Chain A, domain 1 CATH domains
Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..ee.--------.eehhhhhhh..eeee....hhhhhhhhhhhhhhhhhhh....eeeeeee...hhhhhhhhhhhhhhh...eeeeeeeeeehhhhhhhh......eee....eeee.........hhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhh...eeeehhhhhhhh...ee.......... Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE --------------------------------------------------------------------------------------CLP_PROTEASE----------CLP_PROTEASE_H-------------------------------------------------------------------------- PROSITE
Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
3ktg D 3 IPTVI--------AYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLAAEDPEKEISLYINSPGGSITAGMAIYDTMQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAAKRILLLRDKLNKVLAERTGQPLEVIERDTDRDNFKSAEEALEYGLIDKILTHLEHHHHH 198
| - | 22 32 42 52 62 72 82 92 102 112 122 132 142 152 162 172 182 192
7 16
Chain E from PDB Type:PROTEIN Length:188
aligned with CLPP_BACSU | P80244 from UniProtKB/Swiss-Prot Length:197
Alignment length:196
197
13 23 33 43 53 63 73 83 93 103 113 123 133 143 153 163 173 183 193 |
CLPP_BACSU 4 IPTVIEQTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLAAEDPEKEISLYINSPGGSITAGMAIYDTMQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAAKRILLLRDKLNKVLAERTGQPLEVIERDTDRDNFKSAEEALEYGLIDKILTHTEDKK-- -
SCOP domains d3ktg e_ E: automated matches SCOP domains
CATH domains 3ktgE 00 E:3-198 2-enoyl-CoA Hydratase; Chain A, domain 1 CATH domains
Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .....--------..hhhhhhhh..eeee....hhhhhhhhhhhhhhhhhhh....eeeeeee...hhhhhhhhhhhhhhh...eeeeeeeeeehhhhhhhhhh....eee....eeee.........hhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhh....eeeehhhhhhhh...ee.......... Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE --------------------------------------------------------------------------------------CLP_PROTEASE----------CLP_PROTEASE_H-------------------------------------------------------------------------- PROSITE
Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
3ktg E 3 IPTVI--------AYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLAAEDPEKEISLYINSPGGSITAGMAIYDTMQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAAKRILLLRDKLNKVLAERTGQPLEVIERDTDRDNFKSAEEALEYGLIDKILTHLEHHHHH 198
| - | 22 32 42 52 62 72 82 92 102 112 122 132 142 152 162 172 182 192
7 16
Chain F from PDB Type:PROTEIN Length:188
aligned with CLPP_BACSU | P80244 from UniProtKB/Swiss-Prot Length:197
Alignment length:196
197
13 23 33 43 53 63 73 83 93 103 113 123 133 143 153 163 173 183 193 |
CLPP_BACSU 4 IPTVIEQTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLAAEDPEKEISLYINSPGGSITAGMAIYDTMQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAAKRILLLRDKLNKVLAERTGQPLEVIERDTDRDNFKSAEEALEYGLIDKILTHTEDKK-- -
SCOP domains d3ktg f_ F: automated matches SCOP domains
CATH domains 3ktgF 00 F:3-198 2-enoyl-CoA Hydratase; Chain A, domain 1 CATH domains
Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..ee.--------.eehhhhhhh..eeee....hhhhhhhhhhhhhhhhhhh....eeeeeee...hhhhhhhhhhhhhhh...eeeeeeeeeehhhhhhhhh.....eee....eeee.........hhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhh...eeeehhhhhhhh...ee.......... Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE --------------------------------------------------------------------------------------CLP_PROTEASE----------CLP_PROTEASE_H-------------------------------------------------------------------------- PROSITE
Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
3ktg F 3 IPTVI--------AYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLAAEDPEKEISLYINSPGGSITAGMAIYDTMQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAAKRILLLRDKLNKVLAERTGQPLEVIERDTDRDNFKSAEEALEYGLIDKILTHLEHHHHH 198
| - | 22 32 42 52 62 72 82 92 102 112 122 132 142 152 162 172 182 192
7 16
Chain G from PDB Type:PROTEIN Length:188
aligned with CLPP_BACSU | P80244 from UniProtKB/Swiss-Prot Length:197
Alignment length:196
197
13 23 33 43 53 63 73 83 93 103 113 123 133 143 153 163 173 183 193 |
CLPP_BACSU 4 IPTVIEQTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLAAEDPEKEISLYINSPGGSITAGMAIYDTMQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAAKRILLLRDKLNKVLAERTGQPLEVIERDTDRDNFKSAEEALEYGLIDKILTHTEDKK-- -
SCOP domains d3ktg g_ G: automated matches SCOP domains
CATH domains 3ktgG 00 G:3-198 2-enoyl-CoA Hydratase; Chain A, domain 1 CATH domains
Pfam domains (1) -------------CLP_protease-3ktgG01 G:16-191 ------- Pfam domains (1)
Pfam domains (2) -------------CLP_protease-3ktgG02 G:16-191 ------- Pfam domains (2)
Pfam domains (3) -------------CLP_protease-3ktgG03 G:16-191 ------- Pfam domains (3)
Pfam domains (4) -------------CLP_protease-3ktgG04 G:16-191 ------- Pfam domains (4)
Pfam domains (5) -------------CLP_protease-3ktgG05 G:16-191 ------- Pfam domains (5)
Pfam domains (6) -------------CLP_protease-3ktgG06 G:16-191 ------- Pfam domains (6)
Pfam domains (7) -------------CLP_protease-3ktgG07 G:16-191 ------- Pfam domains (7)
Sec.struct. author .....--------..hhhhhhhhh.eeee....hhhhhhhhhhhhhhhhhhh....eeeeeee...hhhhhhhhhhhhhhh...eeeeeeeeeehhhhhhhhhh....eee....eeee.........hhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhh...eeeehhhhhhh....ee.......... Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE --------------------------------------------------------------------------------------CLP_PROTEASE----------CLP_PROTEASE_H-------------------------------------------------------------------------- PROSITE
Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
3ktg G 3 IPTVI--------AYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLAAEDPEKEISLYINSPGGSITAGMAIYDTMQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAAKRILLLRDKLNKVLAERTGQPLEVIERDTDRDNFKSAEEALEYGLIDKILTHLEHHHHH 198
| - | 22 32 42 52 62 72 82 92 102 112 122 132 142 152 162 172 182 192
7 16
Legend: |
|
→ Mismatch |
(orange background) |
|
- |
→ Gap |
(green background, '-', border residues have a numbering label) |
|
|
→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
|
x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
|
extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |