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(-) Description

Title :  CRYSTAL STRUCTURE OF HUMAN 11-BETA-HYDROXYSTEROID-DEHYDROGENASE BOUND TO AN ORTHO-CHLRO-SULFONYL-PIPERAZINE INHIBITOR
 
Authors :  J. Bard, K. Svenson
Date :  23 Apr 09  (Deposition) - 01 Dec 09  (Release) - 01 Dec 09  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.19
Chains :  Asym. Unit :  A,B,C,D
Biol. Unit 1:  A,B  (1x)
Biol. Unit 2:  C,D  (1x)
Keywords :  Oxidoreductase, Hsd1, Nadp, Inhibitor, Endoplasmic Reticulum, Glycoprotein, Lipid Metabolism, Membrane, Polymorphism, Signal-Anchor, Steroid Metabolism, Transmembrane (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  Z. K. Wan, E. Chenail, J. Xiang, H. Q. Li, M. Ipek, J. Bard, K. Svenson, T. S. Mansour, X. Xu, X. Tian, V. Suri, S. Hahm, Y. Xing, C. E. Johnson, X. Li, A. Qadri, D. Panza, M. Perreault, J. F. Tobin, E. Saiah
Efficacious 11Beta-Hydroxysteroid Dehydrogenase Type I Inhibitors In The Diet-Induced Obesity Mouse Model.
J. Med. Chem. V. 52 5449 2009
PubMed-ID: 19673466  |  Reference-DOI: 10.1021/JM900639U
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - CORTICOSTEROID 11-BETA-DEHYDROGENASE ISOZYME 1
    ChainsA, B, C, D
    EC Number1.1.1.146
    EngineeredYES
    Expression SystemESCHERICHIA COLI
    Expression System Taxid562
    Expression System Vector TypePLASMID
    FragmentUNP RESIDUE 24-292, LUMENAL
    GeneHSD11, HSD11B1, HSD11L
    MutationYES
    Organism CommonHUMAN
    Organism ScientificHOMO SAPIENS
    Organism Taxid9606
    Synonym11-BETA-HYDROXYSTEROID DEHYDROGENASE 1, 11-BETA- HSD1, 11-DH

 Structural Features

(-) Chains, Units

  1234
Asymmetric Unit ABCD
Biological Unit 1 (1x)AB  
Biological Unit 2 (1x)  CD

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 8)

Asymmetric Unit (2, 8)
No.NameCountTypeFull Name
133T4Ligand/Ion3-CHLORO-4-({(2R)-4-[4-FLUORO-2-(TRIFLUOROMETHYL)PHENYL]-2-METHYLPIPERAZIN-1-YL}SULFONYL)BENZAMIDE
2NAP4Ligand/IonNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Biological Unit 1 (2, 4)
No.NameCountTypeFull Name
133T2Ligand/Ion3-CHLORO-4-({(2R)-4-[4-FLUORO-2-(TRIFLUOROMETHYL)PHENYL]-2-METHYLPIPERAZIN-1-YL}SULFONYL)BENZAMIDE
2NAP2Ligand/IonNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Biological Unit 2 (2, 4)
No.NameCountTypeFull Name
133T2Ligand/Ion3-CHLORO-4-({(2R)-4-[4-FLUORO-2-(TRIFLUOROMETHYL)PHENYL]-2-METHYLPIPERAZIN-1-YL}SULFONYL)BENZAMIDE
2NAP2Ligand/IonNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE

(-) Sites  (8, 8)

Asymmetric Unit (8, 8)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREGLY A:41 , SER A:43 , LYS A:44 , GLY A:45 , ILE A:46 , ALA A:65 , ARG A:66 , SER A:67 , THR A:92 , MET A:93 , ASN A:119 , HIS A:120 , ILE A:121 , VAL A:168 , SER A:169 , SER A:170 , TYR A:183 , LYS A:187 , LEU A:215 , GLY A:216 , LEU A:217 , ILE A:218 , THR A:220 , THR A:222 , ALA A:223 , 33T A:293 , HOH A:294 , HOH A:330BINDING SITE FOR RESIDUE NAP A 1
2AC2SOFTWARENAP A:1 , THR A:124 , SER A:125 , LEU A:126 , SER A:170 , LEU A:171 , ALA A:172 , TYR A:177 , TYR A:183 , LEU A:215 , GLY A:216 , LEU A:217 , THR A:222 , ALA A:226 , LEU B:279 , TYR B:280BINDING SITE FOR RESIDUE 33T A 293
3AC3SOFTWAREGLY B:41 , SER B:43 , LYS B:44 , GLY B:45 , ILE B:46 , ARG B:66 , SER B:67 , THR B:92 , MET B:93 , ASN B:119 , HIS B:120 , ILE B:121 , ASN B:123 , VAL B:168 , SER B:169 , SER B:170 , TYR B:183 , LYS B:187 , LEU B:215 , GLY B:216 , LEU B:217 , ILE B:218 , THR B:220 , THR B:222 , ALA B:223 , 33T B:293 , HOH B:310BINDING SITE FOR RESIDUE NAP B 1
4AC4SOFTWARETYR A:280 , NAP B:1 , SER B:125 , LEU B:126 , SER B:170 , LEU B:171 , ALA B:172 , TYR B:177 , TYR B:183 , LEU B:215 , GLY B:216 , LEU B:217 , THR B:222 , ALA B:226BINDING SITE FOR RESIDUE 33T B 293
5AC5SOFTWAREGLY C:41 , SER C:43 , LYS C:44 , GLY C:45 , ILE C:46 , ALA C:65 , ARG C:66 , SER C:67 , GLY C:91 , THR C:92 , MET C:93 , ASN C:119 , HIS C:120 , ILE C:121 , VAL C:168 , SER C:169 , SER C:170 , TYR C:183 , LYS C:187 , LEU C:215 , GLY C:216 , LEU C:217 , ILE C:218 , THR C:220 , THR C:222 , ALA C:223 , 33T C:293 , HOH C:302 , HOH C:315BINDING SITE FOR RESIDUE NAP C 1
6AC6SOFTWARENAP C:1 , ILE C:121 , LEU C:126 , SER C:170 , LEU C:171 , ALA C:172 , TYR C:177 , TYR C:183 , LEU C:215 , GLY C:216 , LEU C:217 , THR C:222 , ALA C:226 , TYR D:280BINDING SITE FOR RESIDUE 33T C 293
7AC7SOFTWAREGLY D:41 , SER D:43 , LYS D:44 , GLY D:45 , ILE D:46 , ALA D:65 , ARG D:66 , SER D:67 , THR D:92 , MET D:93 , ASN D:119 , ILE D:121 , VAL D:168 , SER D:169 , SER D:170 , TYR D:183 , LYS D:187 , LEU D:215 , GLY D:216 , LEU D:217 , ILE D:218 , THR D:220 , THR D:222 , ALA D:223 , 33T D:293BINDING SITE FOR RESIDUE NAP D 1
8AC8SOFTWARETYR C:280 , SER C:283 , NAP D:1 , ILE D:121 , THR D:124 , SER D:125 , LEU D:126 , SER D:170 , LEU D:171 , ALA D:172 , TYR D:177 , VAL D:180 , TYR D:183 , LEU D:215 , GLY D:216 , LEU D:217 , THR D:222 , ALA D:226BINDING SITE FOR RESIDUE 33T D 293

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 3H6K)

(-) Cis Peptide Bonds  (2, 2)

Asymmetric Unit
No.Residues
1Ser A:228 -Gly A:229
2Ser A:283 -Tyr A:284

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (2, 8)

Asymmetric Unit (2, 8)
  dbSNPPDB
No.SourceVariant IDVariantUniProt IDStatusIDChainVariant
1UniProtVAR_035845V148EDHI1_HUMANUnclassified  ---A/B/C/DV148E
2CancerSNPVAR_DHI1_HUMAN_CCDS1489_1_01 *V148EDHI1_HUMANDisease (Breast cancer)  ---A/B/C/DV148E
   * ID not provided by source

  SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)
Biological Unit 1 (2, 4)
  dbSNPPDB
No.SourceVariant IDVariantUniProt IDStatusIDChainVariant
1UniProtVAR_035845V148EDHI1_HUMANUnclassified  ---A/BV148E
2CancerSNPVAR_DHI1_HUMAN_CCDS1489_1_01 *V148EDHI1_HUMANDisease (Breast cancer)  ---A/BV148E
   * ID not provided by source

  SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)
Biological Unit 2 (2, 4)
  dbSNPPDB
No.SourceVariant IDVariantUniProt IDStatusIDChainVariant
1UniProtVAR_035845V148EDHI1_HUMANUnclassified  ---C/DV148E
2CancerSNPVAR_DHI1_HUMAN_CCDS1489_1_01 *V148EDHI1_HUMANDisease (Breast cancer)  ---C/DV148E
   * ID not provided by source

  SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)

(-) PROSITE Motifs  (1, 4)

Asymmetric Unit (1, 4)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1ADH_SHORTPS00061 Short-chain dehydrogenases/reductases family signature.DHI1_HUMAN170-198
 
 
 
  4A:170-198
B:170-198
C:170-198
D:170-198
Biological Unit 1 (1, 2)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1ADH_SHORTPS00061 Short-chain dehydrogenases/reductases family signature.DHI1_HUMAN170-198
 
 
 
  2A:170-198
B:170-198
-
-
Biological Unit 2 (1, 2)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1ADH_SHORTPS00061 Short-chain dehydrogenases/reductases family signature.DHI1_HUMAN170-198
 
 
 
  2-
-
C:170-198
D:170-198

(-) Exons   (6, 24)

Asymmetric Unit (6, 24)
 ENSEMBLUniProtKBPDB
No.Transcript IDExonExon IDGenome LocationLengthIDLocationLengthCountLocationLength
1.1aENST000003670281aENSE00001443288chr1:209859510-209859630121DHI1_HUMAN-00--
1.2bENST000003670282bENSE00001443287chr1:209878240-209878375136DHI1_HUMAN1-30304A:26-30
B:22-30
C:24-30
D:26-30
5
9
7
5
1.3ENST000003670283ENSE00000792110chr1:209879156-209879286131DHI1_HUMAN30-73444A:30-73
B:30-73
C:30-73
D:30-73
44
44
44
44
1.4ENST000003670284ENSE00000792111chr1:209880054-209880165112DHI1_HUMAN74-111384A:74-111
B:74-111
C:74-111
D:74-111
38
38
38
38
1.5ENST000003670285ENSE00000792112chr1:209880288-209880473186DHI1_HUMAN111-173634A:111-173
B:111-173
C:111-173
D:111-173
63
63
63
63
1.6ENST000003670286ENSE00000792113chr1:209905781-209905924144DHI1_HUMAN173-221494A:173-221
B:173-221
C:173-221
D:173-221
49
49
49
49
1.7aENST000003670287aENSE00001443286chr1:209907649-209908209561DHI1_HUMAN221-292724A:221-285
B:221-282
C:221-283
D:221-281
65
62
63
61

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it)
Chain A from PDB  Type:PROTEIN  Length:260
 aligned with DHI1_HUMAN | P28845 from UniProtKB/Swiss-Prot  Length:292

    Alignment length:260
                                    35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255       265       275       285
           DHI1_HUMAN    26 EFRPEMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAMKAVSGIVHMQAAPKEECALEIIKGGALRQEEVYYDSSLWTTLLIRNPCRKILEFLYSTSYN 285
               SCOP domains d3h6ka_ A: 11-beta-hydroxysteroid dehydrogenase 1                                                                                                                                                                                                                    SCOP domains
               CATH domains 3h6kA00 A:26-285 NAD(P)-binding Rossmann-like Domain                                                                                                                                                                                                                 CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..hhhhhh..eeee....hhhhhhhhhhhhhh..eeeeee.hhhhhhhhhhhhhhh...eeeeee....hhhhhhhhhhhhhhhhh...eeee.............hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.eeeeeee.hhh.....hhhhhhhhhhhhhhhhhhhhhhhhh....eeeeeee....hhhhhhhh.........hhhhhhhhhhhhhhh...eeee..hhhhhhhhhhhhhhhhhhhh..... Sec.struct. author
             SAPs(SNPs) (1) --------------------------------------------------------------------------------------------------------------------------E----------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs) (1)
             SAPs(SNPs) (2) --------------------------------------------------------------------------------------------------------------------------E----------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs) (2)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------ADH_SHORT  PDB: A:170-198    --------------------------------------------------------------------------------------- PROSITE
           Transcript 1 (1) 1.2b -------------------------------------------Exon 1.4  PDB: A:74-111               -------------------------------------------------------------Exon 1.6  PDB: A:173-221 UniProt: 173-221        ---------------------------------------------------------------- Transcript 1 (1)
           Transcript 1 (2) ----Exon 1.3  PDB: A:30-73 UniProt: 30-73       -------------------------------------Exon 1.5  PDB: A:111-173 UniProt: 111-173                      -----------------------------------------------Exon 1.7a  PDB: A:221-285 UniProt: 221-292 [INCOMPLETE]           Transcript 1 (2)
                 3h6k A  26 EFRPEMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAMKAVSGIVHMQAAPKEECALEIIKGGALRQEEVYYDSSLWTTLLIRNPSRKILEFLYSTSYN 285
                                    35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255       265       275       285

Chain B from PDB  Type:PROTEIN  Length:261
 aligned with DHI1_HUMAN | P28845 from UniProtKB/Swiss-Prot  Length:292

    Alignment length:261
                                    31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281 
           DHI1_HUMAN    22 SANEEFRPEMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAMKAVSGIVHMQAAPKEECALEIIKGGALRQEEVYYDSSLWTTLLIRNPCRKILEFLYST 282
               SCOP domains d3h6kb_ B: 11-beta-hydroxysteroid dehydrogenase 1                                                                                                                                                                                                                     SCOP domains
               CATH domains 3h6kB00 B:22-282 NAD(P)-binding Rossmann-like Domain                                                                                                                                                                                                                  CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......hhhhhh..eeee....hhhhhhhhhhhhhh..eeeeee.hhhhhhhhhhhhhhhh..eeeeee....hhhhhhhhhhhhhhhhh...eeee.............hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..eeeeeee.hhh.....hhhhhhhhhhhhhhhhhhhhhhhhh....eeeeeee....hhhhhhhhh........hhhhhhhhhhhhhhh...eeee...hhhhhhh.hhhhhhhh..... Sec.struct. author
             SAPs(SNPs) (1) ------------------------------------------------------------------------------------------------------------------------------E-------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs) (1)
             SAPs(SNPs) (2) ------------------------------------------------------------------------------------------------------------------------------E-------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs) (2)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------ADH_SHORT  PDB: B:170-198    ------------------------------------------------------------------------------------ PROSITE
           Transcript 1 (1) Exon 1.2b-------------------------------------------Exon 1.4  PDB: B:74-111               -------------------------------------------------------------Exon 1.6  PDB: B:173-221 UniProt: 173-221        ------------------------------------------------------------- Transcript 1 (1)
           Transcript 1 (2) --------Exon 1.3  PDB: B:30-73 UniProt: 30-73       -------------------------------------Exon 1.5  PDB: B:111-173 UniProt: 111-173                      -----------------------------------------------Exon 1.7a  PDB: B:221-282 UniProt: 221-292 [INCOMPLETE]        Transcript 1 (2)
                 3h6k B  22 PLNEEFRPEMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAMKAVSGIVHMQAAPKEECALEIIKGGALRQEEVYYDSSLWTTLLIRNPSRKILEFLYST 282
                                    31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281 

Chain C from PDB  Type:PROTEIN  Length:260
 aligned with DHI1_HUMAN | P28845 from UniProtKB/Swiss-Prot  Length:292

    Alignment length:260
                                    33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273       283
           DHI1_HUMAN    24 NEEFRPEMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAMKAVSGIVHMQAAPKEECALEIIKGGALRQEEVYYDSSLWTTLLIRNPCRKILEFLYSTS 283
               SCOP domains d3h6kc_ C: 11-beta-hydroxysteroid dehydrogenase 1                                                                                                                                                                                                                    SCOP domains
               CATH domains 3h6kC00 C:24-283 NAD(P)-binding Rossmann-like Domain                                                                                                                                                                                                                 CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....hhhhhh..eeee....hhhhhhhhhhhhhh..eeee...hhhhhhhhhhhhhhhh..eeee......hhhhhhhhhhhhhhhhh...eeee.............hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.eeeeeee.hhh.....hhhhhhhhhhhhhhhhhhhhhhhhh....eeeeeee....hhhhhh...........hhhhhhhhhhhhhhh...eeee..hhhhhhhhhhhhhhhhhhhh... Sec.struct. author
             SAPs(SNPs) (1) ----------------------------------------------------------------------------------------------------------------------------E--------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs) (1)
             SAPs(SNPs) (2) ----------------------------------------------------------------------------------------------------------------------------E--------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs) (2)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------ADH_SHORT  PDB: C:170-198    ------------------------------------------------------------------------------------- PROSITE
           Transcript 1 (1) 1.2b   -------------------------------------------Exon 1.4  PDB: C:74-111               -------------------------------------------------------------Exon 1.6  PDB: C:173-221 UniProt: 173-221        -------------------------------------------------------------- Transcript 1 (1)
           Transcript 1 (2) ------Exon 1.3  PDB: C:30-73 UniProt: 30-73       -------------------------------------Exon 1.5  PDB: C:111-173 UniProt: 111-173                      -----------------------------------------------Exon 1.7a  PDB: C:221-283 UniProt: 221-292 [INCOMPLETE]         Transcript 1 (2)
                 3h6k C  24 NEEFRPEMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAMKAVSGIVHMQAAPKEECALEIIKGGALRQEEVYYDSSLWTTLLIRNPSRKILEFLYSTS 283
                                    33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273       283

Chain D from PDB  Type:PROTEIN  Length:256
 aligned with DHI1_HUMAN | P28845 from UniProtKB/Swiss-Prot  Length:292

    Alignment length:256
                                    35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255       265       275      
           DHI1_HUMAN    26 EFRPEMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAMKAVSGIVHMQAAPKEECALEIIKGGALRQEEVYYDSSLWTTLLIRNPCRKILEFLYS 281
               SCOP domains d3h6kd_ D: 11-beta-hydroxysteroid dehydrogenase 1                                                                                                                                                                                                                SCOP domains
               CATH domains 3h6kD00 D:26-281 NAD(P)-binding Rossmann-like Domain                                                                                                                                                                                                             CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..........eeee....hhhhhhhhhhhhhh..eeeeee.hhhhhhhhhhhhhh......eeee....hhhhhhhhhhhhhhhh....eeee.............hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.eeeeeee.hhh.....hhhhhhhhhhhhhhhhhhhhhhhhh....eeeeeee....hhhhhhhhh........hhhhhhhhhhhhhhh...eeee.....hhhhhhhhhhhhhhhhhh Sec.struct. author
             SAPs(SNPs) (1) --------------------------------------------------------------------------------------------------------------------------E------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs) (1)
             SAPs(SNPs) (2) --------------------------------------------------------------------------------------------------------------------------E------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs) (2)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------ADH_SHORT  PDB: D:170-198    ----------------------------------------------------------------------------------- PROSITE
           Transcript 1 (1) 1.2b -------------------------------------------Exon 1.4  PDB: D:74-111               -------------------------------------------------------------Exon 1.6  PDB: D:173-221 UniProt: 173-221        ------------------------------------------------------------ Transcript 1 (1)
           Transcript 1 (2) ----Exon 1.3  PDB: D:30-73 UniProt: 30-73       -------------------------------------Exon 1.5  PDB: D:111-173 UniProt: 111-173                      -----------------------------------------------Exon 1.7a  PDB: D:221-281 UniProt: 221-292 [INCOMPLETE]       Transcript 1 (2)
                 3h6k D  26 EFRPEMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAMKAVSGIVHMQAAPKEECALEIIKGGALRQEEVYYDSSLWTTLLIRNPSRKILEFLYS 281
                                    35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255       265       275      

   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 4)

Asymmetric Unit

(-) CATH Domains  (1, 4)

Asymmetric Unit
(-)
Class: Alpha Beta (26913)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 3H6K)

(-) Gene Ontology  (12, 12)

Asymmetric Unit(hide GO term definitions)
Chain A,B,C,D   (DHI1_HUMAN | P28845)
molecular function
    GO:0070524    11-beta-hydroxysteroid dehydrogenase (NADP+) activity    Catalysis of the reaction: an 11-beta-hydroxysteroid + NADP+ = an 11-oxosteroid + NADPH + H+.
    GO:0003845    11-beta-hydroxysteroid dehydrogenase [NAD(P)] activity    Catalysis of the reaction: an 11-beta-hydroxysteroid + NAD(P)+ = an 11-oxosteroid + NAD(P)H + H(+).
    GO:0016491    oxidoreductase activity    Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
biological process
    GO:0006704    glucocorticoid biosynthetic process    The chemical reactions and pathways resulting in the formation of glucocorticoids, hormonal C21 corticosteroids synthesized from cholesterol.
    GO:0006629    lipid metabolic process    The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids.
    GO:0030324    lung development    The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the esophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax.
    GO:0055114    oxidation-reduction process    A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
    GO:0008202    steroid metabolic process    The chemical reactions and pathways involving steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus.
cellular component
    GO:0005783    endoplasmic reticulum    The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached).
    GO:0005789    endoplasmic reticulum membrane    The lipid bilayer surrounding the endoplasmic reticulum.
    GO:0016021    integral component of membrane    The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
    GO:0016020    membrane    A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        DHI1_HUMAN | P288451xu7 1xu9 2bel 2ilt 2irw 2rbe 3byz 3bzu 3ch6 3czr 3d3e 3d4n 3d5q 3ey4 3fco 3frj 3hfg 3oq1 3pdj 3qqp 3tfq 4bb5 4bb6 4c7j 4c7k 4hfr 4hx5 4iju 4ijv 4ijw 4k1l 4p38 4yyz

(-) Related Entries Specified in the PDB File

(no "Related Entries Specified in the PDB File" available for 3H6K)