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(-) Description

Title :  CATALYTIC SUBUNIT OF M. JANNASCHII ASPARTATE TRANSCARBAMOYLASE IN AN ORTHORHOMBIC CRYSTAL FORM
 
Authors :  J. Vitali, M. J. Colaneri
Date :  06 Aug 08  (Deposition) - 10 Mar 09  (Release) - 10 Mar 09  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  3.00
Chains :  Asym. Unit :  A,B,C,D,E,F,I,J,K,L,M,N
Biol. Unit 1:  A,B,C  (1x)
Biol. Unit 2:  D,E,F  (1x)
Biol. Unit 3:  I,J,K  (1x)
Biol. Unit 4:  L,M,N  (1x)
Biol. Unit 5:  A,B,C,D,E,F  (1x)
Biol. Unit 6:  I,J,K,L,M,N  (1x)
Keywords :  Aspartate Transcarbamoylase, Atcase, Pyrimidine Biosynthesis, Thermostability, Methanococcus Jannaschii, Crystal Structure, Transferase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  J. Vitali, M. J. Colaneri
Structure Of The Catalytic Trimer Of Methanococcus Jannaschii Aspartate Transcarbamoylase In An Orthorhombic Crystal Form.
Acta Crystallogr. , Sect. F V. 64 776 2008
PubMed-ID: 18765902  |  Reference-DOI: 10.1107/S1744309108025359
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - ASPARTATE CARBAMOYLTRANSFERASE
    Chains: A, B, C, D, E, F, I, J, K, L, M, N
    EC Number: 2.1.3.2
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PEK406
    Expression System Strain: EK1594
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Fragment: CATALYTIC SUBUNIT
    Gene: PYRB, MJ1581
    Organism Common: METHANOCOCCUS JANNASCHII
    Organism Scientific: METHANOCALDOCOCCUS JANNASCHII
    Organism Taxid: 2190
    Synonym: ASPARTATE TRANSCARBAMYLASE, ATCASE

 Structural Features

(-) Chains, Units

  123456789101112
Asymmetric Unit : ABCDEFIJKLMN
Biological Unit 1 (1x): ABC         
Biological Unit 2 (1x):    DEF      
Biological Unit 3 (1x):       IJK   
Biological Unit 4 (1x):          LMN
Biological Unit 5 (1x): ABCDEF      
Biological Unit 6 (1x):       IJKLMN

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 4)

Asymmetric Unit (1, 4)
No.NameCountTypeFull Name
1SO44Ligand/IonSULFATE ION
Biological Unit 1 (1, 1)
No.NameCountTypeFull Name
1SO41Ligand/IonSULFATE ION
Biological Unit 2 (1, 1)
No.NameCountTypeFull Name
1SO41Ligand/IonSULFATE ION
Biological Unit 3 (1, 1)
No.NameCountTypeFull Name
1SO41Ligand/IonSULFATE ION
Biological Unit 4 (1, 1)
No.NameCountTypeFull Name
1SO41Ligand/IonSULFATE ION
Biological Unit 5 (1, 2)
No.NameCountTypeFull Name
1SO42Ligand/IonSULFATE ION
Biological Unit 6 (1, 2)
No.NameCountTypeFull Name
1SO42Ligand/IonSULFATE ION

(-) Sites  (4, 4)

Asymmetric Unit (4, 4)
No.NameEvidenceResiduesDescription
1AC1SOFTWARELYS A:63 , VAL A:69 , LYS B:63 , LYS C:63BINDING SITE FOR RESIDUE SO4 A 307
2AC2SOFTWARELYS D:63 , LYS E:63 , VAL E:69 , LYS F:63BINDING SITE FOR RESIDUE SO4 D 307
3AC3SOFTWARELYS I:63 , VAL I:69 , LYS J:63 , LYS K:63 , VAL K:69BINDING SITE FOR RESIDUE SO4 I 307
4AC4SOFTWARELYS L:63 , VAL L:69 , LYS M:63 , VAL M:69 , LYS N:63BINDING SITE FOR RESIDUE SO4 L 307

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 3E2P)

(-) Cis Peptide Bonds  (12, 12)

Asymmetric Unit
No.Residues
1Leu A:263 -Pro A:264
2Leu B:263 -Pro B:264
3Leu C:263 -Pro C:264
4Leu D:263 -Pro D:264
5Leu E:263 -Pro E:264
6Leu F:263 -Pro F:264
7Leu I:263 -Pro I:264
8Leu J:263 -Pro J:264
9Leu K:263 -Pro K:264
10Leu L:263 -Pro L:264
11Leu M:263 -Pro M:264
12Leu N:263 -Pro N:264

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 3E2P)

(-) PROSITE Motifs  (1, 12)

Asymmetric Unit (1, 12)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1CARBAMOYLTRANSFERASEPS00097 Aspartate and ornithine carbamoyltransferases signature.PYRB_METJA47-54
 
 
 
 
 
 
 
 
 
 
 		  12A:47-54
B:47-54
C:47-54
D:47-54
E:47-54
F:47-54
I:47-54
J:47-54
K:47-54
L:47-54
M:47-54
N:47-54
Biological Unit 1 (1, 3)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1CARBAMOYLTRANSFERASEPS00097 Aspartate and ornithine carbamoyltransferases signature.PYRB_METJA47-54
 
 
 
 
 
 
 
 
 
 
 		  3A:47-54
B:47-54
C:47-54
-
-
-
-
-
-
-
-
-
Biological Unit 2 (1, 3)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1CARBAMOYLTRANSFERASEPS00097 Aspartate and ornithine carbamoyltransferases signature.PYRB_METJA47-54
 
 
 
 
 
 
 
 
 
 
 		  3-
-
-
D:47-54
E:47-54
F:47-54
-
-
-
-
-
-
Biological Unit 3 (1, 3)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1CARBAMOYLTRANSFERASEPS00097 Aspartate and ornithine carbamoyltransferases signature.PYRB_METJA47-54
 
 
 
 
 
 
 
 
 
 
 		  3-
-
-
-
-
-
I:47-54
J:47-54
K:47-54
-
-
-
Biological Unit 4 (1, 3)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1CARBAMOYLTRANSFERASEPS00097 Aspartate and ornithine carbamoyltransferases signature.PYRB_METJA47-54
 
 
 
 
 
 
 
 
 
 
 		  3-
-
-
-
-
-
-
-
-
L:47-54
M:47-54
N:47-54
Biological Unit 5 (1, 6)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1CARBAMOYLTRANSFERASEPS00097 Aspartate and ornithine carbamoyltransferases signature.PYRB_METJA47-54
 
 
 
 
 
 
 
 
 
 
 		  6A:47-54
B:47-54
C:47-54
D:47-54
E:47-54
F:47-54
-
-
-
-
-
-
Biological Unit 6 (1, 6)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1CARBAMOYLTRANSFERASEPS00097 Aspartate and ornithine carbamoyltransferases signature.PYRB_METJA47-54
 
 
 
 
 
 
 
 
 
 
 		  6-
-
-
-
-
-
I:47-54
J:47-54
K:47-54
L:47-54
M:47-54
N:47-54

(-) Exons   (0, 0)

(no "Exon" information available for 3E2P)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:306
 aligned with PYRB_METJA | Q58976 from UniProtKB/Swiss-Prot  Length:306

    Alignment length:306
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300      
           PYRB_METJA     1 MKHLISMKDIGKEEILEILDEARKMEELLNTKRPLKLLEGKILATVFYEPSTRTRLSFETAMKRLGGEVITMTDLKSSSVAKGESLIDTIRVISGYADIIVLRHPSEGAARLASEYSQVPIINAGDGSNQHPTQTLLDLYTIMREIGRIDGIKIAFVGDLKYGRTVHSLVYALSLFENVEMYFVSPKELRLPKDIIEDLKAKNIKFYEKESLDDLDDDIDVLYVTRIQKERFPDPNEYEKVKGSYKIKREYVEGKKFIIMHPLPRVDEIDYDVDDLPQAKYFKQSFYGIPVRMAILKKLIEDNEGE 306
               SCOP domains d3e2pa1 A:1-147 automated matches                                                                                                                  d3e2pa2 A:148-306 automated matches                                                                                                                             SCOP domains
               CATH domains 3e2pA01 A:1-130,A:288-306  [code=3.40.50.1370, no name defined]                                                                   3e2pA02 A:131-287  [code=3.40.50.1370, no name defined]                                                                                                      3e2pA01             CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .....hhhhhhhhhhhhhhhhhhhhhhhhhhh.........eeeeee...hhhhhhhhhhhhhhh..eeeee....hhhhhh..hhhhhhhhhhhhh.eeeee....hhhhhhhhhh...eee.......hhhhhhhhhhhhhhhhh.....eeeee.....hhhhhhhhhhhh.....eeeee.......hhhhhhhhhhh...eeee.hhhhh.....eeee...hhhhh.hhhhhhhhhhhhh.hhhhhh....eee.........hhhhh.....hhhhhhhhhhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ----------------------------------------------CARBAMOY------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 3e2p A   1 MKHLISMKDIGKEEILEILDEARKMEELLNTKRPLKLLEGKILATVFYEPSTRTRLSFETAMKRLGGEVITMTDLKSSSVAKGESLIDTIRVISGYADIIVLRHPSEGAARLASEYSQVPIINAGDGSNQHPTQTLLDLYTIMREIGRIDGIKIAFVGDLKYGRTVHSLVYALSLFENVEMYFVSPKELRLPKDIIEDLKAKNIKFYEKESLDDLDDDIDVLYVTRIQKERFPDPNEYEKVKGSYKIKREYVEGKKFIIMHPLPRVDEIDYDVDDLPQAKYFKQSFYGIPVRMAILKKLIEDNEGE 306
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300      


Chain B from PDB  Type:PROTEIN  Length:304
 aligned with PYRB_METJA | Q58976 from UniProtKB/Swiss-Prot  Length:306

    Alignment length:304
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300    
           PYRB_METJA     1 MKHLISMKDIGKEEILEILDEARKMEELLNTKRPLKLLEGKILATVFYEPSTRTRLSFETAMKRLGGEVITMTDLKSSSVAKGESLIDTIRVISGYADIIVLRHPSEGAARLASEYSQVPIINAGDGSNQHPTQTLLDLYTIMREIGRIDGIKIAFVGDLKYGRTVHSLVYALSLFENVEMYFVSPKELRLPKDIIEDLKAKNIKFYEKESLDDLDDDIDVLYVTRIQKERFPDPNEYEKVKGSYKIKREYVEGKKFIIMHPLPRVDEIDYDVDDLPQAKYFKQSFYGIPVRMAILKKLIEDNE 304
               SCOP domains d3e2pb1 B:1-147 automated matches                                                                                                                  d3e2pb2 B:148-304 automated matches                                                                                                                           SCOP domains
               CATH domains 3e2pB01 B:1-130,B:288-304  [code=3.40.50.1370, no name defined]                                                                   3e2pB02 B:131-287  [code=3.40.50.1370, no name defined]                                                                                                      3e2pB01           CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....hhhhhhhhhhhhhhhhhhhhhhhhhhh.........eeeeee...hhhhhhhhhhhhhhh..eeeee............hhhhhhhhhhhhh.eeeee....hhhhhhhhhh...eee.......hhhhhhhhhhhhhhhhh.....eeeee.....hhhhhhhhhhhh.....eeeee.......hhhhhhhhhhh...eeee.hhhhh.....eeee...hhhhh.hhhhhhhhhhhhh.hhhhhh....eee.........hhhhh.....hhhhhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------CARBAMOY---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3e2p B   1 MKHLISMKDIGKEEILEILDEARKMEELLNTKRPLKLLEGKILATVFYEPSTRTRLSFETAMKRLGGEVITMTDLKSSSVAKGESLIDTIRVISGYADIIVLRHPSEGAARLASEYSQVPIINAGDGSNQHPTQTLLDLYTIMREIGRIDGIKIAFVGDLKYGRTVHSLVYALSLFENVEMYFVSPKELRLPKDIIEDLKAKNIKFYEKESLDDLDDDIDVLYVTRIQKERFPDPNEYEKVKGSYKIKREYVEGKKFIIMHPLPRVDEIDYDVDDLPQAKYFKQSFYGIPVRMAILKKLIEDNE 304
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300    


Chain C from PDB  Type:PROTEIN  Length:306
 aligned with PYRB_METJA | Q58976 from UniProtKB/Swiss-Prot  Length:306

    Alignment length:306
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300      
           PYRB_METJA     1 MKHLISMKDIGKEEILEILDEARKMEELLNTKRPLKLLEGKILATVFYEPSTRTRLSFETAMKRLGGEVITMTDLKSSSVAKGESLIDTIRVISGYADIIVLRHPSEGAARLASEYSQVPIINAGDGSNQHPTQTLLDLYTIMREIGRIDGIKIAFVGDLKYGRTVHSLVYALSLFENVEMYFVSPKELRLPKDIIEDLKAKNIKFYEKESLDDLDDDIDVLYVTRIQKERFPDPNEYEKVKGSYKIKREYVEGKKFIIMHPLPRVDEIDYDVDDLPQAKYFKQSFYGIPVRMAILKKLIEDNEGE 306
               SCOP domains d3e2pc1 C:1-147 automated matches                                                                                                                  d3e2pc2 C:148-306 automated matches                                                                                                                             SCOP domains
               CATH domains 3e2pC01 C:1-130,C:288-306  [code=3.40.50.1370, no name defined]                                                                   3e2pC02 C:131-287  [code=3.40.50.1370, no name defined]                                                                                                      3e2pC01             CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .....hhhhhhhhhhhhhhhhhhhhhhhhhh..........eeeeee...hhhhhhhhhhhhhhh..eeeeee...........hhhhhhhhhhhhh.eeeee....hhhhhhhhhh...eee.......hhhhhhhhhhhhhhhhh.....eeeee.....hhhhhhhhhhhh.....eeeee.......hhhhhhhhhhh...eeee.hhhhh.....eeee...hhhhh.hhhhhhhhhhhhh.hhhhhh....eee.........hhhhh.....hhhhhhhhhhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ----------------------------------------------CARBAMOY------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 3e2p C   1 MKHLISMKDIGKEEILEILDEARKMEELLNTKRPLKLLEGKILATVFYEPSTRTRLSFETAMKRLGGEVITMTDLKSSSVAKGESLIDTIRVISGYADIIVLRHPSEGAARLASEYSQVPIINAGDGSNQHPTQTLLDLYTIMREIGRIDGIKIAFVGDLKYGRTVHSLVYALSLFENVEMYFVSPKELRLPKDIIEDLKAKNIKFYEKESLDDLDDDIDVLYVTRIQKERFPDPNEYEKVKGSYKIKREYVEGKKFIIMHPLPRVDEIDYDVDDLPQAKYFKQSFYGIPVRMAILKKLIEDNEGE 306
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300      


Chain D from PDB  Type:PROTEIN  Length:306
 aligned with PYRB_METJA | Q58976 from UniProtKB/Swiss-Prot  Length:306

    Alignment length:306
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300      
           PYRB_METJA     1 MKHLISMKDIGKEEILEILDEARKMEELLNTKRPLKLLEGKILATVFYEPSTRTRLSFETAMKRLGGEVITMTDLKSSSVAKGESLIDTIRVISGYADIIVLRHPSEGAARLASEYSQVPIINAGDGSNQHPTQTLLDLYTIMREIGRIDGIKIAFVGDLKYGRTVHSLVYALSLFENVEMYFVSPKELRLPKDIIEDLKAKNIKFYEKESLDDLDDDIDVLYVTRIQKERFPDPNEYEKVKGSYKIKREYVEGKKFIIMHPLPRVDEIDYDVDDLPQAKYFKQSFYGIPVRMAILKKLIEDNEGE 306
               SCOP domains d3e2pd1 D:1-147 automated matches                                                                                                                  d3e2pd2 D:148-306 automated matches                                                                                                                             SCOP domains
               CATH domains 3e2pD01 D:1-130,D:288-306  [code=3.40.50.1370, no name defined]                                                                   3e2pD02 D:131-287  [code=3.40.50.1370, no name defined]                                                                                                      3e2pD01             CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .....hhhhhhhhhhhhhhhhhhhhhhhhhh..........eeeeee...hhhhhhhhhhhhhhh..eeeee....hhhhhh..hhhhhhhhhhhhh.eeeee....hhhhhhhhhh...eee.......hhhhhhhhhhhhhhhhh.....eeeee.....hhhhhhhhhhhh.....eeeee.hhhhh.hhhhhhhhhhh...eeee...........eeee...hhhhh.hhhhhhhhhhhhh.hhhhhh....eee.........hhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ----------------------------------------------CARBAMOY------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 3e2p D   1 MKHLISMKDIGKEEILEILDEARKMEELLNTKRPLKLLEGKILATVFYEPSTRTRLSFETAMKRLGGEVITMTDLKSSSVAKGESLIDTIRVISGYADIIVLRHPSEGAARLASEYSQVPIINAGDGSNQHPTQTLLDLYTIMREIGRIDGIKIAFVGDLKYGRTVHSLVYALSLFENVEMYFVSPKELRLPKDIIEDLKAKNIKFYEKESLDDLDDDIDVLYVTRIQKERFPDPNEYEKVKGSYKIKREYVEGKKFIIMHPLPRVDEIDYDVDDLPQAKYFKQSFYGIPVRMAILKKLIEDNEGE 306
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300      


Chain E from PDB  Type:PROTEIN  Length:306
 aligned with PYRB_METJA | Q58976 from UniProtKB/Swiss-Prot  Length:306

    Alignment length:306
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300      
           PYRB_METJA     1 MKHLISMKDIGKEEILEILDEARKMEELLNTKRPLKLLEGKILATVFYEPSTRTRLSFETAMKRLGGEVITMTDLKSSSVAKGESLIDTIRVISGYADIIVLRHPSEGAARLASEYSQVPIINAGDGSNQHPTQTLLDLYTIMREIGRIDGIKIAFVGDLKYGRTVHSLVYALSLFENVEMYFVSPKELRLPKDIIEDLKAKNIKFYEKESLDDLDDDIDVLYVTRIQKERFPDPNEYEKVKGSYKIKREYVEGKKFIIMHPLPRVDEIDYDVDDLPQAKYFKQSFYGIPVRMAILKKLIEDNEGE 306
               SCOP domains d3e2pe1 E:1-147 automated matches                                                                                                                  d3e2pe2 E:148-306 automated matches                                                                                                                             SCOP domains
               CATH domains 3e2pE01 E:1-130,E:288-306  [code=3.40.50.1370, no name defined]                                                                   3e2pE02 E:131-287  [code=3.40.50.1370, no name defined]                                                                                                      3e2pE01             CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .....hhhhhhhhhhhhhhhhhhhhhhhhhh..........eeeeee...hhhhhhhhhhhhhhh..eeeeee...........hhhhhhhhhhhhh.eeeee....hhhhhhhhhh...eee.......hhhhhhhhhhhhhhhh......eeeee.....hhhhhhhhhhhh.....eeeee.hhhhh.hhhhhhhhhhh...eeee.hhhhh.....eeee...hhhhh.hhhhhhhhhhhhh.hhhhhh....eee.........hhhhh.....hhhhhhhhhhhhhhhhhhhhhhh.... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ----------------------------------------------CARBAMOY------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 3e2p E   1 MKHLISMKDIGKEEILEILDEARKMEELLNTKRPLKLLEGKILATVFYEPSTRTRLSFETAMKRLGGEVITMTDLKSSSVAKGESLIDTIRVISGYADIIVLRHPSEGAARLASEYSQVPIINAGDGSNQHPTQTLLDLYTIMREIGRIDGIKIAFVGDLKYGRTVHSLVYALSLFENVEMYFVSPKELRLPKDIIEDLKAKNIKFYEKESLDDLDDDIDVLYVTRIQKERFPDPNEYEKVKGSYKIKREYVEGKKFIIMHPLPRVDEIDYDVDDLPQAKYFKQSFYGIPVRMAILKKLIEDNEGE 306
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300      


Chain F from PDB  Type:PROTEIN  Length:306
 aligned with PYRB_METJA | Q58976 from UniProtKB/Swiss-Prot  Length:306

    Alignment length:306
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300      
           PYRB_METJA     1 MKHLISMKDIGKEEILEILDEARKMEELLNTKRPLKLLEGKILATVFYEPSTRTRLSFETAMKRLGGEVITMTDLKSSSVAKGESLIDTIRVISGYADIIVLRHPSEGAARLASEYSQVPIINAGDGSNQHPTQTLLDLYTIMREIGRIDGIKIAFVGDLKYGRTVHSLVYALSLFENVEMYFVSPKELRLPKDIIEDLKAKNIKFYEKESLDDLDDDIDVLYVTRIQKERFPDPNEYEKVKGSYKIKREYVEGKKFIIMHPLPRVDEIDYDVDDLPQAKYFKQSFYGIPVRMAILKKLIEDNEGE 306
               SCOP domains d3e2pf1 F:1-147 automated matches                                                                                                                  d3e2pf2 F:148-306 automated matches                                                                                                                             SCOP domains
               CATH domains 3e2pF01 F:1-130,F:288-306  [code=3.40.50.1370, no name defined]                                                                   3e2pF02 F:131-287  [code=3.40.50.1370, no name defined]                                                                                                      3e2pF01             CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .....hhhhhhhhhhhhhhhhhhhhhhhhhh..........eeeeee...hhhhhhhhhhhhhhh..eeeeee...........hhhhhhhhhhhhh.eeeee....hhhhhhhhhh...eee.......hhhhhhhhhhhhhhhh......eeeee.....hhhhhhhhhhhh.....eeeee.......hhhhhhhhhhh...eeee...........eeee...hhhhh.hhhhhhhhhhhhh.hhhhhh....eee.........hhhhh.....hhhhhhhhhhhhhhhhhhhhhhh.... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ----------------------------------------------CARBAMOY------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 3e2p F   1 MKHLISMKDIGKEEILEILDEARKMEELLNTKRPLKLLEGKILATVFYEPSTRTRLSFETAMKRLGGEVITMTDLKSSSVAKGESLIDTIRVISGYADIIVLRHPSEGAARLASEYSQVPIINAGDGSNQHPTQTLLDLYTIMREIGRIDGIKIAFVGDLKYGRTVHSLVYALSLFENVEMYFVSPKELRLPKDIIEDLKAKNIKFYEKESLDDLDDDIDVLYVTRIQKERFPDPNEYEKVKGSYKIKREYVEGKKFIIMHPLPRVDEIDYDVDDLPQAKYFKQSFYGIPVRMAILKKLIEDNEGE 306
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300      


Chain I from PDB  Type:PROTEIN  Length:304
 aligned with PYRB_METJA | Q58976 from UniProtKB/Swiss-Prot  Length:306

    Alignment length:304
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300    
           PYRB_METJA     1 MKHLISMKDIGKEEILEILDEARKMEELLNTKRPLKLLEGKILATVFYEPSTRTRLSFETAMKRLGGEVITMTDLKSSSVAKGESLIDTIRVISGYADIIVLRHPSEGAARLASEYSQVPIINAGDGSNQHPTQTLLDLYTIMREIGRIDGIKIAFVGDLKYGRTVHSLVYALSLFENVEMYFVSPKELRLPKDIIEDLKAKNIKFYEKESLDDLDDDIDVLYVTRIQKERFPDPNEYEKVKGSYKIKREYVEGKKFIIMHPLPRVDEIDYDVDDLPQAKYFKQSFYGIPVRMAILKKLIEDNE 304
               SCOP domains d3e2pi1 I:1-147 automated matches                                                                                                                  d3e2pi2 I:148-304 automated matches                                                                                                                           SCOP domains
               CATH domains 3e2pI01 I:1-130,I:288-304  [code=3.40.50.1370, no name defined]                                                                   3e2pI02 I:131-287  [code=3.40.50.1370, no name defined]                                                                                                      3e2pI01           CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....hhhhhhhhhhhhhhhhhhhhhhhhh...........eeeeee...hhhhhhhhhhhhhhh..eeeeee...........hhhhhhhhhhhhh.eeeee....hhhhhhhhhh...eee.......hhhhhhhhhhhhhhhhh.....eeeee.....hhhhhhhhhhhh.....eeeee.hhhhh.hhhhhhhhhhh...eeee...........eeee...hhhhh.hhhhhhhhhhhhh.hhhhhh....eee.........hhhhh.....hhhhhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------CARBAMOY---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3e2p I   1 MKHLISMKDIGKEEILEILDEARKMEELLNTKRPLKLLEGKILATVFYEPSTRTRLSFETAMKRLGGEVITMTDLKSSSVAKGESLIDTIRVISGYADIIVLRHPSEGAARLASEYSQVPIINAGDGSNQHPTQTLLDLYTIMREIGRIDGIKIAFVGDLKYGRTVHSLVYALSLFENVEMYFVSPKELRLPKDIIEDLKAKNIKFYEKESLDDLDDDIDVLYVTRIQKERFPDPNEYEKVKGSYKIKREYVEGKKFIIMHPLPRVDEIDYDVDDLPQAKYFKQSFYGIPVRMAILKKLIEDNE 304
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300    


Chain J from PDB  Type:PROTEIN  Length:304
 aligned with PYRB_METJA | Q58976 from UniProtKB/Swiss-Prot  Length:306

    Alignment length:304
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300    
           PYRB_METJA     1 MKHLISMKDIGKEEILEILDEARKMEELLNTKRPLKLLEGKILATVFYEPSTRTRLSFETAMKRLGGEVITMTDLKSSSVAKGESLIDTIRVISGYADIIVLRHPSEGAARLASEYSQVPIINAGDGSNQHPTQTLLDLYTIMREIGRIDGIKIAFVGDLKYGRTVHSLVYALSLFENVEMYFVSPKELRLPKDIIEDLKAKNIKFYEKESLDDLDDDIDVLYVTRIQKERFPDPNEYEKVKGSYKIKREYVEGKKFIIMHPLPRVDEIDYDVDDLPQAKYFKQSFYGIPVRMAILKKLIEDNE 304
               SCOP domains d3e2pj1 J:1-147 automated matches                                                                                                                  d3e2pj2 J:148-304 automated matches                                                                                                                           SCOP domains
               CATH domains 3e2pJ01 J:1-130,J:288-304  [code=3.40.50.1370, no name defined]                                                                   3e2pJ02 J:131-287  [code=3.40.50.1370, no name defined]                                                                                                      3e2pJ01           CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....hhhhhhhhhhhhhhhhhhhhhhhhhhh.........eeeeee...hhhhhhhhhhhhhhh..eeeeee...........hhhhhhhhhhhhh.eeeee....hhhhhhhhhh...eee.......hhhhhhhhhhhhhhhh......eeeee.....hhhhhhhhhhhh.....eeeee.hhhhh.hhhhhhhhhhh...eeee.hhhhh.....eeee...hhhhh.hhhhhhhhhhhhh.hhhhhh....eee.........hhhhh.....hhhhhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------CARBAMOY---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3e2p J   1 MKHLISMKDIGKEEILEILDEARKMEELLNTKRPLKLLEGKILATVFYEPSTRTRLSFETAMKRLGGEVITMTDLKSSSVAKGESLIDTIRVISGYADIIVLRHPSEGAARLASEYSQVPIINAGDGSNQHPTQTLLDLYTIMREIGRIDGIKIAFVGDLKYGRTVHSLVYALSLFENVEMYFVSPKELRLPKDIIEDLKAKNIKFYEKESLDDLDDDIDVLYVTRIQKERFPDPNEYEKVKGSYKIKREYVEGKKFIIMHPLPRVDEIDYDVDDLPQAKYFKQSFYGIPVRMAILKKLIEDNE 304
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300    


Chain K from PDB  Type:PROTEIN  Length:305
 aligned with PYRB_METJA | Q58976 from UniProtKB/Swiss-Prot  Length:306

    Alignment length:305
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300     
           PYRB_METJA     1 MKHLISMKDIGKEEILEILDEARKMEELLNTKRPLKLLEGKILATVFYEPSTRTRLSFETAMKRLGGEVITMTDLKSSSVAKGESLIDTIRVISGYADIIVLRHPSEGAARLASEYSQVPIINAGDGSNQHPTQTLLDLYTIMREIGRIDGIKIAFVGDLKYGRTVHSLVYALSLFENVEMYFVSPKELRLPKDIIEDLKAKNIKFYEKESLDDLDDDIDVLYVTRIQKERFPDPNEYEKVKGSYKIKREYVEGKKFIIMHPLPRVDEIDYDVDDLPQAKYFKQSFYGIPVRMAILKKLIEDNEG 305
               SCOP domains d3e2pk1 K:1-147 automated matches                                                                                                                  d3e2pk2 K:148-305 automated matches                                                                                                                            SCOP domains
               CATH domains 3e2pK01 K:1-130,K:288-305  [code=3.40.50.1370, no name defined]                                                                   3e2pK02 K:131-287  [code=3.40.50.1370, no name defined]                                                                                                      3e2pK01            CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....hhhhhhhhhhhhhhhhhhhhhhhhhh..........eeeeee...hhhhhhhhhhhhhhh..eeeee............hhhhhhhhhhhhh.eeeee....hhhhhhhhhh...eee.......hhhhhhhhhhhhhhhh......eeeee.....hhhhhhhhhhhh.....eeeee.......hhhhhhhhhhh...eeee...........eeee...hhhhh.hhhhhhhhhhhhh.hhhhhh....eee.........hhhhh.....hhhhhhhhhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------CARBAMOY----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3e2p K   1 MKHLISMKDIGKEEILEILDEARKMEELLNTKRPLKLLEGKILATVFYEPSTRTRLSFETAMKRLGGEVITMTDLKSSSVAKGESLIDTIRVISGYADIIVLRHPSEGAARLASEYSQVPIINAGDGSNQHPTQTLLDLYTIMREIGRIDGIKIAFVGDLKYGRTVHSLVYALSLFENVEMYFVSPKELRLPKDIIEDLKAKNIKFYEKESLDDLDDDIDVLYVTRIQKERFPDPNEYEKVKGSYKIKREYVEGKKFIIMHPLPRVDEIDYDVDDLPQAKYFKQSFYGIPVRMAILKKLIEDNEG 305
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300     


Chain L from PDB  Type:PROTEIN  Length:305
 aligned with PYRB_METJA | Q58976 from UniProtKB/Swiss-Prot  Length:306

    Alignment length:305
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300     
           PYRB_METJA     1 MKHLISMKDIGKEEILEILDEARKMEELLNTKRPLKLLEGKILATVFYEPSTRTRLSFETAMKRLGGEVITMTDLKSSSVAKGESLIDTIRVISGYADIIVLRHPSEGAARLASEYSQVPIINAGDGSNQHPTQTLLDLYTIMREIGRIDGIKIAFVGDLKYGRTVHSLVYALSLFENVEMYFVSPKELRLPKDIIEDLKAKNIKFYEKESLDDLDDDIDVLYVTRIQKERFPDPNEYEKVKGSYKIKREYVEGKKFIIMHPLPRVDEIDYDVDDLPQAKYFKQSFYGIPVRMAILKKLIEDNEG 305
               SCOP domains d3e2pl1 L:1-147 automated matches                                                                                                                  d3e2pl2 L:148-305 automated matches                                                                                                                            SCOP domains
               CATH domains 3e2pL01 L:1-130,L:288-305  [code=3.40.50.1370, no name defined]                                                                   3e2pL02 L:131-287  [code=3.40.50.1370, no name defined]                                                                                                      3e2pL01            CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....hhhhhhhhhhhhhhhhhhhhhhhhhh..........eeeeee...hhhhhhhhhhhhhhh..eeeee....hhhhhh..hhhhhhhhhhhhh.eeeee....hhhhhhhhhh...eee.......hhhhhhhhhhhhhhhhh.....eeeee.....hhhhhhhhhhhh.....eeeee.......hhhhhhhhhhh...eeee...........eeee...hhhhh.hhhhhhhhhhhhh.hhhhhh....eee.........hhhhh.....hhhhhhhhhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------CARBAMOY----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3e2p L   1 MKHLISMKDIGKEEILEILDEARKMEELLNTKRPLKLLEGKILATVFYEPSTRTRLSFETAMKRLGGEVITMTDLKSSSVAKGESLIDTIRVISGYADIIVLRHPSEGAARLASEYSQVPIINAGDGSNQHPTQTLLDLYTIMREIGRIDGIKIAFVGDLKYGRTVHSLVYALSLFENVEMYFVSPKELRLPKDIIEDLKAKNIKFYEKESLDDLDDDIDVLYVTRIQKERFPDPNEYEKVKGSYKIKREYVEGKKFIIMHPLPRVDEIDYDVDDLPQAKYFKQSFYGIPVRMAILKKLIEDNEG 305
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300     


Chain M from PDB  Type:PROTEIN  Length:305
 aligned with PYRB_METJA | Q58976 from UniProtKB/Swiss-Prot  Length:306

    Alignment length:305
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300     
           PYRB_METJA     1 MKHLISMKDIGKEEILEILDEARKMEELLNTKRPLKLLEGKILATVFYEPSTRTRLSFETAMKRLGGEVITMTDLKSSSVAKGESLIDTIRVISGYADIIVLRHPSEGAARLASEYSQVPIINAGDGSNQHPTQTLLDLYTIMREIGRIDGIKIAFVGDLKYGRTVHSLVYALSLFENVEMYFVSPKELRLPKDIIEDLKAKNIKFYEKESLDDLDDDIDVLYVTRIQKERFPDPNEYEKVKGSYKIKREYVEGKKFIIMHPLPRVDEIDYDVDDLPQAKYFKQSFYGIPVRMAILKKLIEDNEG 305
               SCOP domains d3e2pm1 M:1-147 automated matches                                                                                                                  d3e2pm2 M:148-305 automated matches                                                                                                                            SCOP domains
               CATH domains 3e2pM01 M:1-130,M:288-305  [code=3.40.50.1370, no name defined]                                                                   3e2pM02 M:131-287  [code=3.40.50.1370, no name defined]                                                                                                      3e2pM01            CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....hhhhhhhhhhhhhhhhhhhhhhhhhh..........eeeeee...hhhhhhhhhhhhhhh..eeeee............hhhhhhhhhhhhh.eeeee....hhhhhhhhhh...eee.......hhhhhhhhhhhhhhhhh.....eeeee.....hhhhhhhhhhhh.....eeeee.hhhhh.hhhhhhhhhhh...eeee.hhhhh.....eeee...hhhhh.hhhhhhhhhhhhh.hhhhhh....eee.........hhhhh.....hhhhhhhhhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------CARBAMOY----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3e2p M   1 MKHLISMKDIGKEEILEILDEARKMEELLNTKRPLKLLEGKILATVFYEPSTRTRLSFETAMKRLGGEVITMTDLKSSSVAKGESLIDTIRVISGYADIIVLRHPSEGAARLASEYSQVPIINAGDGSNQHPTQTLLDLYTIMREIGRIDGIKIAFVGDLKYGRTVHSLVYALSLFENVEMYFVSPKELRLPKDIIEDLKAKNIKFYEKESLDDLDDDIDVLYVTRIQKERFPDPNEYEKVKGSYKIKREYVEGKKFIIMHPLPRVDEIDYDVDDLPQAKYFKQSFYGIPVRMAILKKLIEDNEG 305
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300     


Chain N from PDB  Type:PROTEIN  Length:304
 aligned with PYRB_METJA | Q58976 from UniProtKB/Swiss-Prot  Length:306

    Alignment length:304
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300    
           PYRB_METJA     1 MKHLISMKDIGKEEILEILDEARKMEELLNTKRPLKLLEGKILATVFYEPSTRTRLSFETAMKRLGGEVITMTDLKSSSVAKGESLIDTIRVISGYADIIVLRHPSEGAARLASEYSQVPIINAGDGSNQHPTQTLLDLYTIMREIGRIDGIKIAFVGDLKYGRTVHSLVYALSLFENVEMYFVSPKELRLPKDIIEDLKAKNIKFYEKESLDDLDDDIDVLYVTRIQKERFPDPNEYEKVKGSYKIKREYVEGKKFIIMHPLPRVDEIDYDVDDLPQAKYFKQSFYGIPVRMAILKKLIEDNE 304
               SCOP domains d3e2pn1 N:1-147 automated matches                                                                                                                  d3e2pn2 N:148-304 automated matches                                                                                                                           SCOP domains
               CATH domains 3e2pN01 N:1-130,N:288-304  [code=3.40.50.1370, no name defined]                                                                   3e2pN02 N:131-287  [code=3.40.50.1370, no name defined]                                                                                                      3e2pN01           CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....hhhhhhhhhhhhhhhhhhhhhhhhhhh.........eeeeee...hhhhhhhhhhhhhhh..eeeee............hhhhhhhhhhhhh.eeeee....hhhhhhhhhh...eee.......hhhhhhhhhhhhhhhhh.....eeeee.....hhhhhhhhhhhh.....eeeee.hhhhh.hhhhhhhhhhh...eeee.hhhhh.....eeee...hhhhh.hhhhhhhhhhhhh.hhhhhh....eee.........hhhhh.....hhhhhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------CARBAMOY---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3e2p N   1 MKHLISMKDIGKEEILEILDEARKMEELLNTKRPLKLLEGKILATVFYEPSTRTRLSFETAMKRLGGEVITMTDLKSSSVAKGESLIDTIRVISGYADIIVLRHPSEGAARLASEYSQVPIINAGDGSNQHPTQTLLDLYTIMREIGRIDGIKIAFVGDLKYGRTVHSLVYALSLFENVEMYFVSPKELRLPKDIIEDLKAKNIKFYEKESLDDLDDDIDVLYVTRIQKERFPDPNEYEKVKGSYKIKREYVEGKKFIIMHPLPRVDEIDYDVDDLPQAKYFKQSFYGIPVRMAILKKLIEDNE 304
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 24)

Asymmetric Unit
(-)
Class: Alpha and beta proteins (a/b) (23833)
(-)
Fold: ATC-like (129)
(-)
Superfamily: Aspartate/ornithine carbamoyltransferase (122)
(-)
Family: automated matches (35)
(-)
Protein domain: automated matches (35)
(-)
Methanocaldococcus jannaschii [TaxId: 2190] (1)
1ad3e2pa1A:1-147
1bd3e2pa2A:148-306
1cd3e2pf1F:1-147
1dd3e2pf2F:148-306
1ed3e2pi1I:1-147
1fd3e2pi2I:148-304
1gd3e2pj1J:1-147
1hd3e2pj2J:148-304
1id3e2pk1K:1-147
1jd3e2pk2K:148-305
1kd3e2pl1L:1-147
1ld3e2pl2L:148-305
1md3e2pb1B:1-147
1nd3e2pm1M:1-147
1od3e2pm2M:148-305
1pd3e2pn1N:1-147
1qd3e2pn2N:148-304
1rd3e2pb2B:148-304
1sd3e2pc1C:1-147
1td3e2pc2C:148-306
1ud3e2pd1D:1-147
1vd3e2pd2D:148-306
1wd3e2pe1E:1-147
1xd3e2pe2E:148-306

(-) CATH Domains  (1, 24)

Asymmetric Unit
(-)
Class: Alpha Beta (26913)
(-)
Architecture: 3-Layer(aba) Sandwich (12045)
(-)
Topology: Rossmann fold (7312)
(-)
Homologous Superfamily: [code=3.40.50.1370, no name defined] (91)
(-)
Methanococcus jannaschii (Methanocaldococcus jannaschii) (1)
1a3e2pA02A:131-287
1b3e2pB02B:131-287
1c3e2pM02M:131-287
1d3e2pN02N:131-287
1e3e2pA01A:1-130,A:288-306
1f3e2pC01C:1-130,C:288-306
1g3e2pD01D:1-130,D:288-306
1h3e2pE01E:1-130,E:288-306
1i3e2pF01F:1-130,F:288-306
1j3e2pK01K:1-130,K:288-305
1k3e2pL01L:1-130,L:288-305
1l3e2pM01M:1-130,M:288-305
1m3e2pC02C:131-287
1n3e2pB01B:1-130,B:288-304
1o3e2pI01I:1-130,I:288-304
1p3e2pJ01J:1-130,J:288-304
1q3e2pN01N:1-130,N:288-304
1r3e2pD02D:131-287
1s3e2pE02E:131-287
1t3e2pF02F:131-287
1u3e2pI02I:131-287
1v3e2pJ02J:131-287
1w3e2pK02K:131-287
1x3e2pL02L:131-287

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 3E2P)

(-) Gene Ontology  (11, 11)

Asymmetric Unit(hide GO term definitions)
Chain A,B,C,D,E,F,I,J,K,L,M,N   (PYRB_METJA | Q58976)
molecular function
    GO:0016597    amino acid binding    Interacting selectively and non-covalently with an amino acid, organic acids containing one or more amino substituents.
    GO:0004070    aspartate carbamoyltransferase activity    Catalysis of the reaction: L-aspartate + carbamoyl phosphate = N-carbamoyl-L-aspartate + H(+) + phosphate.
    GO:0016743    carboxyl- or carbamoyltransferase activity    Catalysis of the transfer of a carboxyl- or carbamoyl group from one compound (donor) to another (acceptor).
    GO:0016740    transferase activity    Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2.
biological process
    GO:0044205    'de novo' UMP biosynthetic process    The chemical reactions and pathways resulting in the formation of UMP, uridine monophosphate, starting with the synthesis of (S)-dihydroorotate from bicarbonate; UMP biosynthesis may either occur via reduction by quinone, NAD(+) or oxygen.
    GO:0006207    'de novo' pyrimidine nucleobase biosynthetic process    The chemical reactions and pathways resulting in the formation of pyrimidine nucleobases, 1,3-diazine, organic nitrogenous bases, beginning with the synthesis of a pyrimidine ring from simpler precursors.
    GO:0006520    cellular amino acid metabolic process    The chemical reactions and pathways involving amino acids, carboxylic acids containing one or more amino groups, as carried out by individual cells.
    GO:0006221    pyrimidine nucleotide biosynthetic process    The chemical reactions and pathways resulting in the formation of a pyrimidine nucleotide, a compound consisting of nucleoside (a pyrimidine base linked to a deoxyribose or ribose sugar) esterified with a phosphate group at either the 3' or 5'-hydroxyl group of the sugar.
    GO:0009220    pyrimidine ribonucleotide biosynthetic process    The chemical reactions and pathways resulting in the formation of a pyrimidine ribonucleotide, a compound consisting of nucleoside (a pyrimidine base linked to a ribose sugar) esterified with a phosphate group at either the 3' or 5'-hydroxyl group of the sugar.
    GO:0000050    urea cycle    The sequence of reactions by which arginine is synthesized from ornithine, then cleaved to yield urea and regenerate ornithine. The overall reaction equation is NH3 + CO2 + aspartate + 3 ATP + 2 H2O = urea + fumarate + 2 ADP + 2 phosphate + AMP + diphosphate.
cellular component
    GO:0005737    cytoplasm    All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.

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  protein, nucleic acid: cartoon; ligands: spacefill; active site: ball and stick
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  3e2p
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  PYRB_METJA | Q58976
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  2.1.3.2
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  PYRB_METJA | Q58976
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        PYRB_METJA | Q58976: 2rgw 4ekn

(-) Related Entries Specified in the PDB File

(no "Related Entries Specified in the PDB File" available for 3E2P)