3BIM - JenaLib

Asymmetric Unit

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	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:125
 aligned with BCL6_HUMAN | P41182 from UniProtKB/Swiss-Prot  Length:706

    Alignment length:125
                                    14        24        34        44        54        64        74        84        94       104       114       124     
           BCL6_HUMAN     5 ADSCIQFTRHASDVLLNLNRLRSRDILTDVVIVVSREQFRAHKTVLMACSGLFYSIFTDQLKCNLSVINLDPEINPEGFCILLDFMYTSRLNLREGNIMAVMATAMYLQMEHVVDTCRKFIKASE 129
               SCOP domains d3bima_ A: B-cell lymphoma 6 (Bcl6) protein BTB domain                                                                        SCOP domains
               CATH domains 3bimA00 A:5-129 Potassium Channel Kv1.1; Chain A                                                                              CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeee.hhhhhhhhhhhhhhhhh....eeeee..eeeeehhhhhhhhhhhhhhhhhh.......eee.....hhhhhhhhhhhhhhheee....hhhhhhhhhhhhhhhhhhhhhhh...... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------BTB  PDB: A:32-99 UniProt: 32-99                                    ------------------------------ PROSITE
           Transcript 1 (1) Exon 1.5  PDB: A:5-54 UniProt: 1-54 [INCOMPLETE]  -------------------------------------------------------------------------1. Transcript 1 (1)
           Transcript 1 (2) -------------------------------------------------Exon 1.6c  PDB: A:54-128 UniProt: 54-128                                   - Transcript 1 (2)
                 3bim A   5 ADSQIQFTRHASDVLLNLNRLRSRDILTDVVIVVSREQFRAHKTVLMACSGLFYSIFTDQLKRNLSVINLDPEINPEGFNILLDFMYTSRLNLREGNIMAVMATAMYLQMEHVVDTCRKFIKASE 129
                                    14        24        34        44        54        64        74        84        94       104       114       124

Chain B from PDB  Type:PROTEIN  Length:124
 aligned with BCL6_HUMAN | P41182 from UniProtKB/Swiss-Prot  Length:706

    Alignment length:124
                                    14        24        34        44        54        64        74        84        94       104       114       124    
           BCL6_HUMAN     5 ADSCIQFTRHASDVLLNLNRLRSRDILTDVVIVVSREQFRAHKTVLMACSGLFYSIFTDQLKCNLSVINLDPEINPEGFCILLDFMYTSRLNLREGNIMAVMATAMYLQMEHVVDTCRKFIKAS 128
               SCOP domains d3bimb_ B: B-cell lymphoma 6 (Bcl6) protein BTB domain                                                                       SCOP domains
               CATH domains 3bimB00 B:5-128 Potassium Channel Kv1.1; Chain A                                                                             CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeee.hhhhhhhhhhhhhhhh.....eeeee..eeeeehhhhhhhhhhhhhhhhh........eee.....hhhhhhhhhhhhhhheeee...hhhhhhhhhhhh.hhhhhhhhhh..... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------BTB  PDB: B:32-99 UniProt: 32-99                                    ----------------------------- PROSITE
           Transcript 1 (1) Exon 1.5  PDB: B:5-54 UniProt: 1-54 [INCOMPLETE]  -------------------------------------------------------------------------1 Transcript 1 (1)
           Transcript 1 (2) -------------------------------------------------Exon 1.6c  PDB: B:54-128 UniProt: 54-128                                    Transcript 1 (2)
                 3bim B   5 ADSQIQFTRHASDVLLNLNRLRSRDILTDVVIVVSREQFRAHKTVLMACSGLFYSIFTDQLKRNLSVINLDPEINPEGFNILLDFMYTSRLNLREGNIMAVMATAMYLQMEHVVDTCRKFIKAS 128
                                    14        24        34        44        54        64        74        84        94       104       114       124

Chain C from PDB  Type:PROTEIN  Length:125
 aligned with BCL6_HUMAN | P41182 from UniProtKB/Swiss-Prot  Length:706

    Alignment length:125
                                    14        24        34        44        54        64        74        84        94       104       114       124     
           BCL6_HUMAN     5 ADSCIQFTRHASDVLLNLNRLRSRDILTDVVIVVSREQFRAHKTVLMACSGLFYSIFTDQLKCNLSVINLDPEINPEGFCILLDFMYTSRLNLREGNIMAVMATAMYLQMEHVVDTCRKFIKASE 129
               SCOP domains d3bimc_ C: B-cell lymphoma 6 (Bcl6) protein BTB domain                                                                        SCOP domains
               CATH domains 3bimC00 C:5-129 Potassium Channel Kv1.1; Chain A                                                                              CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeee.hhhhhhhhhhhhhhhh.....eeeee..eeeeehhhhhhhhhhhhhhhhh........eee.....hhhhhhhhhhhhhhhee.....hhhhhhhhhhhh.hhhhhhhhhh...... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------BTB  PDB: C:32-99 UniProt: 32-99                                    ------------------------------ PROSITE
           Transcript 1 (1) Exon 1.5  PDB: C:5-54 UniProt: 1-54 [INCOMPLETE]  -------------------------------------------------------------------------1. Transcript 1 (1)
           Transcript 1 (2) -------------------------------------------------Exon 1.6c  PDB: C:54-128 UniProt: 54-128                                   - Transcript 1 (2)
                 3bim C   5 ADSQIQFTRHASDVLLNLNRLRSRDILTDVVIVVSREQFRAHKTVLMACSGLFYSIFTDQLKRNLSVINLDPEINPEGFNILLDFMYTSRLNLREGNIMAVMATAMYLQMEHVVDTCRKFIKASE 129
                                    14        24        34        44        54        64        74        84        94       104       114       124

Chain D from PDB  Type:PROTEIN  Length:124
 aligned with BCL6_HUMAN | P41182 from UniProtKB/Swiss-Prot  Length:706

    Alignment length:124
                                    14        24        34        44        54        64        74        84        94       104       114       124    
           BCL6_HUMAN     5 ADSCIQFTRHASDVLLNLNRLRSRDILTDVVIVVSREQFRAHKTVLMACSGLFYSIFTDQLKCNLSVINLDPEINPEGFCILLDFMYTSRLNLREGNIMAVMATAMYLQMEHVVDTCRKFIKAS 128
               SCOP domains d3bimd_ D: B-cell lymphoma 6 (Bcl6) protein BTB domain                                                                       SCOP domains
               CATH domains 3bimD00 D:5-128 Potassium Channel Kv1.1; Chain A                                                                             CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeee.hhhhhhhhhhhhhhhh.....eeeee..eeeeehhhhhhhhhhhhhhhhhh.......eee.....hhhhhhhhhhhhhhheeee...hhhhhhhhhhhh.hhhhhhhhhhh.... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------BTB  PDB: D:32-99 UniProt: 32-99                                    ----------------------------- PROSITE
           Transcript 1 (1) Exon 1.5  PDB: D:5-54 UniProt: 1-54 [INCOMPLETE]  -------------------------------------------------------------------------1 Transcript 1 (1)
           Transcript 1 (2) -------------------------------------------------Exon 1.6c  PDB: D:54-128 UniProt: 54-128                                    Transcript 1 (2)
                 3bim D   5 ADSQIQFTRHASDVLLNLNRLRSRDILTDVVIVVSREQFRAHKTVLMACSGLFYSIFTDQLKRNLSVINLDPEINPEGFNILLDFMYTSRLNLREGNIMAVMATAMYLQMEHVVDTCRKFIKAS 128
                                    14        24        34        44        54        64        74        84        94       104       114       124

Chain E from PDB  Type:PROTEIN  Length:123
 aligned with BCL6_HUMAN | P41182 from UniProtKB/Swiss-Prot  Length:706

    Alignment length:123
                                    15        25        35        45        55        65        75        85        95       105       115       125   
           BCL6_HUMAN     6 DSCIQFTRHASDVLLNLNRLRSRDILTDVVIVVSREQFRAHKTVLMACSGLFYSIFTDQLKCNLSVINLDPEINPEGFCILLDFMYTSRLNLREGNIMAVMATAMYLQMEHVVDTCRKFIKAS 128
               SCOP domains d3bime_ E: B-cell lymphoma 6 (Bcl6) protein BTB domain                                                                      SCOP domains
               CATH domains 3bimE00 E:6-128 Potassium Channel Kv1.1; Chain A                                                                            CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeee.hhhhhhhhhhhhhhhh.....eeeee..eeeeehhhhhhhhhhhhhhhhhh.......eee.....hhhhhhhhhhhhh..ee.....hhhhhhhhhhhh.hhhhhhhhhh..... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------BTB  PDB: E:32-99 UniProt: 32-99                                    ----------------------------- PROSITE
           Transcript 1 (1) Exon 1.5  PDB: E:6-54 UniProt: 1-54 [INCOMPLETE] -------------------------------------------------------------------------1 Transcript 1 (1)
           Transcript 1 (2) ------------------------------------------------Exon 1.6c  PDB: E:54-128 UniProt: 54-128                                    Transcript 1 (2)
                 3bim E   6 DSQIQFTRHASDVLLNLNRLRSRDILTDVVIVVSREQFRAHKTVLMACSGLFYSIFTDQLKRNLSVINLDPEINPEGFNILLDFMYTSRLNLREGNIMAVMATAMYLQMEHVVDTCRKFIKAS 128
                                    15        25        35        45        55        65        75        85        95       105       115       125

Chain F from PDB  Type:PROTEIN  Length:122
 aligned with BCL6_HUMAN | P41182 from UniProtKB/Swiss-Prot  Length:706

    Alignment length:122
                                    14        24        34        44        54        64        74        84        94       104       114       124  
           BCL6_HUMAN     5 ADSCIQFTRHASDVLLNLNRLRSRDILTDVVIVVSREQFRAHKTVLMACSGLFYSIFTDQLKCNLSVINLDPEINPEGFCILLDFMYTSRLNLREGNIMAVMATAMYLQMEHVVDTCRKFIK 126
               SCOP domains d3bimf_ F: B-cell lymphoma 6 (Bcl6) protein BTB domain                                                                     SCOP domains
               CATH domains 3bimF00 F:5-126 Potassium Channel Kv1.1; Chain A                                                                           CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....eee.hhhhhhhhhhhhhhhh.....eeeee..eeeeehhhhhhhhhhhhhhhhhh.......eee.....hhhhhhhhhhhhhhheeee...hhhhhhhhhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------BTB  PDB: F:32-99 UniProt: 32-99                                    --------------------------- PROSITE
           Transcript 1 (1) Exon 1.5  PDB: F:5-54 UniProt: 1-54 [INCOMPLETE]  ------------------------------------------------------------------------ Transcript 1 (1)
           Transcript 1 (2) -------------------------------------------------Exon 1.6c  PDB: F:54-126 UniProt: 54-128 [INCOMPLETE]                     Transcript 1 (2)
                 3bim F   5 ADSQIQFTRHASDVLLNLNRLRSRDILTDVVIVVSREQFRAHKTVLMACSGLFYSIFTDQLKRNLSVINLDPEINPEGFNILLDFMYTSRLNLREGNIMAVMATAMYLQMEHVVDTCRKFIK 126
                                    14        24        34        44        54        64        74        84        94       104       114       124

Chain G from PDB  Type:PROTEIN  Length:122
 aligned with BCL6_HUMAN | P41182 from UniProtKB/Swiss-Prot  Length:706

    Alignment length:122
                                    16        26        36        46        56        66        76        86        96       106       116       126  
           BCL6_HUMAN     7 SCIQFTRHASDVLLNLNRLRSRDILTDVVIVVSREQFRAHKTVLMACSGLFYSIFTDQLKCNLSVINLDPEINPEGFCILLDFMYTSRLNLREGNIMAVMATAMYLQMEHVVDTCRKFIKAS 128
               SCOP domains d3bimg_ G: B-cell lymphoma 6 (Bcl6) protein BTB domain                                                                     SCOP domains
               CATH domains 3bimG00 G:7-128 Potassium Channel Kv1.1; Chain A                                                                           CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeee.hhhhhhhhhhhhhhhh.....eeeee..eeeeehhhhhhhhhhhhhhhhhh.......eee.....hhhhhhhhhhhhhhheeee...hhhhhhhhhhhh.hhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------BTB  PDB: G:32-99 UniProt: 32-99                                    ----------------------------- PROSITE
           Transcript 1 (1) Exon 1.5  PDB: G:7-54 UniProt: 1-54 [INCOMPLETE]-------------------------------------------------------------------------1 Transcript 1 (1)
           Transcript 1 (2) -----------------------------------------------Exon 1.6c  PDB: G:54-128 UniProt: 54-128                                    Transcript 1 (2)
                 3bim G   7 SQIQFTRHASDVLLNLNRLRSRDILTDVVIVVSREQFRAHKTVLMACSGLFYSIFTDQLKRNLSVINLDPEINPEGFNILLDFMYTSRLNLREGNIMAVMATAMYLQMEHVVDTCRKFIKAS 128
                                    16        26        36        46        56        66        76        86        96       106       116       126

Chain H from PDB  Type:PROTEIN  Length:122
 aligned with BCL6_HUMAN | P41182 from UniProtKB/Swiss-Prot  Length:706

    Alignment length:122
                                    15        25        35        45        55        65        75        85        95       105       115       125  
           BCL6_HUMAN     6 DSCIQFTRHASDVLLNLNRLRSRDILTDVVIVVSREQFRAHKTVLMACSGLFYSIFTDQLKCNLSVINLDPEINPEGFCILLDFMYTSRLNLREGNIMAVMATAMYLQMEHVVDTCRKFIKA 127
               SCOP domains d3bimh_ H: B-cell lymphoma 6 (Bcl6) protein BTB domain                                                                     SCOP domains
               CATH domains 3bimH00 H:6-127 Potassium Channel Kv1.1; Chain A                                                                           CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeee.hhhhhhhhhhhhhhhh.....eeeee..eeeeehhhhhhhhhhhhhhhhh........eeee....hhhhhhhhhhhhhhhee.....hhhhhhhhhhhh.hhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------BTB  PDB: H:32-99 UniProt: 32-99                                    ---------------------------- PROSITE
           Transcript 1 (1) Exon 1.5  PDB: H:6-54 UniProt: 1-54 [INCOMPLETE] ------------------------------------------------------------------------- Transcript 1 (1)
           Transcript 1 (2) ------------------------------------------------Exon 1.6c  PDB: H:54-127 UniProt: 54-128 [INCOMPLETE]                      Transcript 1 (2)
                 3bim H   6 DSQIQFTRHASDVLLNLNRLRSRDILTDVVIVVSREQFRAHKTVLMACSGLFYSIFTDQLKRNLSVINLDPEINPEGFNILLDFMYTSRLNLREGNIMAVMATAMYLQMEHVVDTCRKFIKA 127
                                    15        25        35        45        55        65        75        85        95       105       115       125

Chain I from PDB  Type:PROTEIN  Length:17
 aligned with BCOR_HUMAN | Q6W2J9 from UniProtKB/Swiss-Prot  Length:1755

    Alignment length:17
                                   507       
           BCOR_HUMAN   498 RSEIISTAPSSWVVPGP 514
               SCOP domains ----------------- SCOP domains
               CATH domains ----------------- CATH domains
               Pfam domains ----------------- Pfam domains
         Sec.struct. author ..eeee........... Sec.struct. author
                 SAPs(SNPs) ----------------- SAPs(SNPs)
                    PROSITE ----------------- PROSITE
               Transcript 2 Exon 2.6a         Transcript 2
                 3bim I 498 RSEIISTAPSSWVVPGP 514
                                   507

Chain J from PDB  Type:PROTEIN  Length:17
 aligned with BCOR_HUMAN | Q6W2J9 from UniProtKB/Swiss-Prot  Length:1755

    Alignment length:17
                                   507       
           BCOR_HUMAN   498 RSEIISTAPSSWVVPGP 514
               SCOP domains ----------------- SCOP domains
               CATH domains ----------------- CATH domains
               Pfam domains ----------------- Pfam domains
         Sec.struct. author .eeeee........... Sec.struct. author
                 SAPs(SNPs) ----------------- SAPs(SNPs)
                    PROSITE ----------------- PROSITE
               Transcript 2 Exon 2.6a         Transcript 2
                 3bim J 498 RSEIISTAPSSWVVPGP 514
                                   507

Chain K from PDB  Type:PROTEIN  Length:17
 aligned with BCOR_HUMAN | Q6W2J9 from UniProtKB/Swiss-Prot  Length:1755

    Alignment length:17
                                   507       
           BCOR_HUMAN   498 RSEIISTAPSSWVVPGP 514
               SCOP domains ----------------- SCOP domains
               CATH domains ----------------- CATH domains
               Pfam domains ----------------- Pfam domains
         Sec.struct. author ..eeee........... Sec.struct. author
                 SAPs(SNPs) ----------------- SAPs(SNPs)
                    PROSITE ----------------- PROSITE
               Transcript 2 Exon 2.6a         Transcript 2
                 3bim K 498 RSEIISTAPSSWVVPGP 514
                                   507

Chain L from PDB  Type:PROTEIN  Length:16
 aligned with BCOR_HUMAN | Q6W2J9 from UniProtKB/Swiss-Prot  Length:1755

    Alignment length:16
                                   508      
           BCOR_HUMAN   499 SEIISTAPSSWVVPGP 514
               SCOP domains ---------------- SCOP domains
               CATH domains ---------------- CATH domains
               Pfam domains ---------------- Pfam domains
         Sec.struct. author .eeee........... Sec.struct. author
                 SAPs(SNPs) ---------------- SAPs(SNPs)
                    PROSITE ---------------- PROSITE
               Transcript 2 Exon 2.6a        Transcript 2
                 3bim L 499 SEIISTAPSSWVVPGP 514
                                   508

Chain M from PDB  Type:PROTEIN  Length:17
 aligned with BCOR_HUMAN | Q6W2J9 from UniProtKB/Swiss-Prot  Length:1755

    Alignment length:17
                                   507       
           BCOR_HUMAN   498 RSEIISTAPSSWVVPGP 514
               SCOP domains ----------------- SCOP domains
               CATH domains ----------------- CATH domains
               Pfam domains ----------------- Pfam domains
         Sec.struct. author ...eee........... Sec.struct. author
                 SAPs(SNPs) ----------------- SAPs(SNPs)
                    PROSITE ----------------- PROSITE
               Transcript 2 Exon 2.6a         Transcript 2
                 3bim M 498 RSEIISTAPSSWVVPGP 514
                                   507

Chain N from PDB  Type:PROTEIN  Length:16
 aligned with BCOR_HUMAN | Q6W2J9 from UniProtKB/Swiss-Prot  Length:1755

    Alignment length:16
                                   508      
           BCOR_HUMAN   499 SEIISTAPSSWVVPGP 514
               SCOP domains ---------------- SCOP domains
               CATH domains ---------------- CATH domains
               Pfam domains ---------------- Pfam domains
         Sec.struct. author .eeee........... Sec.struct. author
                 SAPs(SNPs) ---------------- SAPs(SNPs)
                    PROSITE ---------------- PROSITE
               Transcript 2 Exon 2.6a        Transcript 2
                 3bim N 499 SEIISTAPSSWVVPGP 514
                                   508

Chain O from PDB  Type:PROTEIN  Length:17
 aligned with BCOR_HUMAN | Q6W2J9 from UniProtKB/Swiss-Prot  Length:1755

    Alignment length:17
                                   507       
           BCOR_HUMAN   498 RSEIISTAPSSWVVPGP 514
               SCOP domains ----------------- SCOP domains
               CATH domains ----------------- CATH domains
               Pfam domains ----------------- Pfam domains
         Sec.struct. author ..eeee........... Sec.struct. author
                 SAPs(SNPs) ----------------- SAPs(SNPs)
                    PROSITE ----------------- PROSITE
               Transcript 2 Exon 2.6a         Transcript 2
                 3bim O 498 RSEIISTAPSSWVVPGP 514
                                   507

Chain P from PDB  Type:PROTEIN  Length:17
 aligned with BCOR_HUMAN | Q6W2J9 from UniProtKB/Swiss-Prot  Length:1755

    Alignment length:17
                                   507       
           BCOR_HUMAN   498 RSEIISTAPSSWVVPGP 514
               SCOP domains ----------------- SCOP domains
               CATH domains ----------------- CATH domains
               Pfam domains ----------------- Pfam domains
         Sec.struct. author ..eeee........... Sec.struct. author
                 SAPs(SNPs) ----------------- SAPs(SNPs)
                    PROSITE ----------------- PROSITE
               Transcript 2 Exon 2.6a         Transcript 2
                 3bim P 498 RSEIISTAPSSWVVPGP 514
                                   507

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

Asymmetric Unit(hide GO term definitions)

Chain A,B,C,D,E,F,G,H (BCL6_HUMAN | P41182)

molecular function
	GO:0003677	DNA binding	Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
	GO:0000977	RNA polymerase II regulatory region sequence-specific DNA binding	Interacting selectively and non-covalently with a specific sequence of DNA that is part of a regulatory region that controls the transcription of a gene or cistron by RNA polymerase II.
	GO:0031490	chromatin DNA binding	Interacting selectively and non-covalently with DNA that is assembled into chromatin.
	GO:0003682	chromatin binding	Interacting selectively and non-covalently with chromatin, the network of fibers of DNA, protein, and sometimes RNA, that make up the chromosomes of the eukaryotic nucleus during interphase.
	GO:0001161	intronic transcription regulatory region sequence-specific DNA binding	Interacting selectively and non-covalently with an intronic DNA sequence that regulates the transcription of the transcript it is contained within.
	GO:0046872	metal ion binding	Interacting selectively and non-covalently with any metal ion.
	GO:0003676	nucleic acid binding	Interacting selectively and non-covalently with any nucleic acid.
	GO:0005515	protein binding	Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
	GO:0043565	sequence-specific DNA binding	Interacting selectively and non-covalently with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding.
	GO:0003700	transcription factor activity, sequence-specific DNA binding	Interacting selectively and non-covalently with a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex.
	GO:0001227	transcriptional repressor activity, RNA polymerase II transcription regulatory region sequence-specific binding	Interacting selectively and non-covalently with a sequence of DNA that is in the regulatory region for RNA polymerase II (RNAP II) in order to stop, prevent, or reduce the frequency, rate or extent of transcription from an RNA polymerase II promoter.
biological process
	GO:0030183	B cell differentiation	The process in which a precursor cell type acquires the specialized features of a B cell. A B cell is a lymphocyte of B lineage with the phenotype CD19-positive and capable of B cell mediated immunity.
	GO:0007266	Rho protein signal transduction	A series of molecular signals within the cell that are mediated by a member of the Rho family of proteins switching to a GTP-bound active state.
	GO:0030036	actin cytoskeleton organization	A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins.
	GO:0000902	cell morphogenesis	The developmental process in which the size or shape of a cell is generated and organized.
	GO:0006974	cellular response to DNA damage stimulus	Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism.
	GO:0048821	erythrocyte development	The process whose specific outcome is the progression of an erythrocyte over time, from its formation to the mature structure.
	GO:0002467	germinal center formation	The process in which germinal centers form. A germinal center is a specialized microenvironment formed when activated B cells enter lymphoid follicles. Germinal centers are the foci for B cell proliferation and somatic hypermutation.
	GO:0002376	immune system process	Any process involved in the development or functioning of the immune system, an organismal system for calibrated responses to potential internal or invasive threats.
	GO:0006954	inflammatory response	The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages.
	GO:0030099	myeloid cell differentiation	The process in which a relatively unspecialized myeloid precursor cell acquires the specialized features of any cell of the myeloid leukocyte, megakaryocyte, thrombocyte, or erythrocyte lineages.
	GO:0002903	negative regulation of B cell apoptotic process	Any process that stops, prevents, or reduces the frequency, rate, or extent of B cell apoptotic process.
	GO:0045746	negative regulation of Notch signaling pathway	Any process that stops, prevents, or reduces the frequency, rate or extent of the Notch signaling pathway.
	GO:0035024	negative regulation of Rho protein signal transduction	Any process that stops, prevents, or reduces the frequency, rate or extent of Rho protein signal transduction.
	GO:0045629	negative regulation of T-helper 2 cell differentiation	Any process that stops, prevents, or reduces the frequency, rate or extent of T-helper 2 cell differentiation.
	GO:0043066	negative regulation of apoptotic process	Any process that stops, prevents, or reduces the frequency, rate or extent of cell death by apoptotic process.
	GO:0045596	negative regulation of cell differentiation	Any process that stops, prevents, or reduces the frequency, rate or extent of cell differentiation.
	GO:0030308	negative regulation of cell growth	Any process that stops, prevents, or reduces the frequency, rate, extent or direction of cell growth.
	GO:0008285	negative regulation of cell proliferation	Any process that stops, prevents or reduces the rate or extent of cell proliferation.
	GO:0001953	negative regulation of cell-matrix adhesion	Any process that stops, prevents, or reduces the rate or extent of cell adhesion to the extracellular matrix.
	GO:2000773	negative regulation of cellular senescence	Any process that stops, prevents or reduces the frequency, rate or extent of cellular senescence.
	GO:0048294	negative regulation of isotype switching to IgE isotypes	Any process that stops, prevents, or reduces the frequency, rate or extent of isotype switching to IgE isotypes.
	GO:0032764	negative regulation of mast cell cytokine production	Any process that stops, prevents, or reduces the frequency, rate, or extent of mast cell cytokine production.
	GO:0000122	negative regulation of transcription from RNA polymerase II promoter	Any process that stops, prevents, or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter.
	GO:0045892	negative regulation of transcription, DNA-templated	Any process that stops, prevents, or reduces the frequency, rate or extent of cellular DNA-templated transcription.
	GO:0002829	negative regulation of type 2 immune response	Any process that stops, prevents, or reduces the frequency, rate, or extent of a type 2 immune response.
	GO:0030890	positive regulation of B cell proliferation	Any process that activates or increases the rate or extent of B cell proliferation.
	GO:0043065	positive regulation of apoptotic process	Any process that activates or increases the frequency, rate or extent of cell death by apoptotic process.
	GO:0051272	positive regulation of cellular component movement	Any process that activates or increases the frequency, rate or extent of the movement of a cellular component.
	GO:0031065	positive regulation of histone deacetylation	Any process that activates or increases the frequency, rate or extent of the removal of acetyl groups from histones.
	GO:0045666	positive regulation of neuron differentiation	Any process that activates or increases the frequency, rate or extent of neuron differentiation.
	GO:0000060	protein import into nucleus, translocation	A protein transport process that contributes to protein import into the nucleus, and that results in the vectorial transfer of a cargo-carrier protein complex through the nuclear pore complex from the cytoplasmic side to the nucleoplasmic side of the nuclear envelope.
	GO:0008104	protein localization	Any process in which a protein is transported to, or maintained in, a specific location.
	GO:0043087	regulation of GTPase activity	Any process that modulates the rate of GTP hydrolysis by a GTPase.
	GO:0042981	regulation of apoptotic process	Any process that modulates the occurrence or rate of cell death by apoptotic process.
	GO:0042127	regulation of cell proliferation	Any process that modulates the frequency, rate or extent of cell proliferation.
	GO:0002634	regulation of germinal center formation	Any process that modulates the frequency, rate, or extent of germinal center formation.
	GO:0050776	regulation of immune response	Any process that modulates the frequency, rate or extent of the immune response, the immunological reaction of an organism to an immunogenic stimulus.
	GO:0050727	regulation of inflammatory response	Any process that modulates the frequency, rate or extent of the inflammatory response, the immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents.
	GO:0043380	regulation of memory T cell differentiation	Any process that modulates the frequency, rate, or extent of memory T cell differentiation.
	GO:0050767	regulation of neurogenesis	Any process that modulates the frequency, rate or extent of neurogenesis, the origin and formation of neurons.
	GO:0006357	regulation of transcription from RNA polymerase II promoter	Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter.
	GO:0006355	regulation of transcription, DNA-templated	Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
	GO:0007283	spermatogenesis	The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis.
	GO:0006351	transcription, DNA-templated	The cellular synthesis of RNA on a template of DNA.
	GO:0042092	type 2 immune response	An immune response which is associated with resistance to extracellular organisms such as helminths and pathological conditions such as allergy, which is orchestrated by the production of particular cytokines, most notably IL-4, IL-5, IL-10, and IL-13, by any of a variety of cell types including T-helper 2 cells, eosinophils, basophils, mast cells, and nuocytes, resulting in enhanced production of certain antibody isotypes and other effects.
cellular component
	GO:0005654	nucleoplasm	That part of the nuclear content other than the chromosomes or the nucleolus.
	GO:0005634	nucleus	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
	GO:0005657	replication fork	The Y-shaped region of a replicating DNA molecule, resulting from the separation of the DNA strands and in which the synthesis of new strands takes place. Also includes associated protein complexes.

Chain I,J,K,L,M,N,O,P (BCOR_HUMAN | Q6W2J9)

molecular function
	GO:0031072	heat shock protein binding	Interacting selectively and non-covalently with a heat shock protein, any protein synthesized or activated in response to heat shock.
	GO:0042826	histone deacetylase binding	Interacting selectively and non-covalently with the enzyme histone deacetylase.
	GO:0005515	protein binding	Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
	GO:0003714	transcription corepressor activity	Interacting selectively and non-covalently with a repressing transcription factor and also with the basal transcription machinery in order to stop, prevent, or reduce the frequency, rate or extent of transcription. Cofactors generally do not bind the template nucleic acid, but rather mediate protein-protein interactions between repressive transcription factors and the basal transcription machinery.
	GO:0008134	transcription factor binding	Interacting selectively and non-covalently with a transcription factor, any protein required to initiate or regulate transcription.
	GO:0044212	transcription regulatory region DNA binding	Interacting selectively and non-covalently with a DNA region that regulates the transcription of a region of DNA, which may be a gene, cistron, or operon. Binding may occur as a sequence specific interaction or as an interaction observed only once a factor has been recruited to the DNA by other factors.
	GO:0004842	ubiquitin-protein transferase activity	Catalysis of the transfer of ubiquitin from one protein to another via the reaction X-Ub + Y --> Y-Ub + X, where both X-Ub and Y-Ub are covalent linkages.
biological process
	GO:0007507	heart development	The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood.
	GO:0035518	histone H2A monoubiquitination	The modification of histone H2A by addition of a single ubiquitin group.
	GO:0030502	negative regulation of bone mineralization	Any process that stops, prevents, or reduces the frequency, rate or extent of bone mineralization.
	GO:0000415	negative regulation of histone H3-K36 methylation	Any process that stops, prevents, or reduces the frequency, rate or extent of the covalent addition of a methyl group to the lysine at position 36 of histone H3.
	GO:0051572	negative regulation of histone H3-K4 methylation	Any process that stops, prevents, or reduces the frequency, rate or extent of the covalent addition of a methyl group to the lysine at position 4 of histone H3.
	GO:0070171	negative regulation of tooth mineralization	Any process that stops, prevents, or reduces the frequency, rate or extent of tooth mineralization, the deposition of calcium salts in tooth structures.
	GO:0000122	negative regulation of transcription from RNA polymerase II promoter	Any process that stops, prevents, or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter.
	GO:0045892	negative regulation of transcription, DNA-templated	Any process that stops, prevents, or reduces the frequency, rate or extent of cellular DNA-templated transcription.
	GO:0042476	odontogenesis	The process whose specific outcome is the progression of a tooth or teeth over time, from formation to the mature structure(s). A tooth is any hard bony, calcareous, or chitinous organ found in the mouth or pharynx of an animal and used in procuring or masticating food.
	GO:0060021	palate development	The biological process whose specific outcome is the progression of the palate from an initial condition to its mature state. This process begins with the formation of the structure and ends with the mature structure. The palate is the partition that separates the nasal and oral cavities.
	GO:0006355	regulation of transcription, DNA-templated	Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
	GO:0065001	specification of axis polarity	The pattern specification process in which the polarity of a body or organ axis is established and maintained.
	GO:0006351	transcription, DNA-templated	The cellular synthesis of RNA on a template of DNA.
cellular component
	GO:0031519	PcG protein complex	A chromatin-associated multiprotein complex containing Polycomb Group proteins. In Drosophila, Polycomb group proteins are involved in the long-term maintenance of gene repression, and PcG protein complexes associate with Polycomb group response elements (PREs) in target genes to regulate higher-order chromatin structure.
	GO:0005739	mitochondrion	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration.
	GO:0005634	nucleus	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.

Description

Compounds

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (0, 0)

Sites (0, 0)

SS Bonds (0, 0)

Cis Peptide Bonds (0, 0)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (0, 0)

PROSITE Motifs (1, 8)

Exons (4, 30)

Sequences/Alignments

Classification and Annotation

SCOP Domains (1, 8)

CATH Domains (1, 8)

Pfam Domains (0, 0)

Gene Ontology (76, 82)

Visualization

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Databases

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Related Entries

Entries Sharing at Least One Protein Chain (UniProt ID)

Related Entries Specified in the PDB File