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(-) Description

Title :  CRYSTAL STRUCTURE OF ADP RIBOSYL CYCLASE COMPLEXED WITH SUBSTRATE NAD AND PRODUCT CADPR
 
Authors :  M. Kotaka, R. Graeff, L. H. Zhang, H. C. Lee, Q. Hao
Date :  02 Aug 11  (Deposition) - 30 Nov 11  (Release) - 25 Jan 12  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.50
Chains :  Asym. Unit :  A,B,C,D,E,F,G,H
Biol. Unit 1:  E,F  (1x)
Biol. Unit 2:  C,D  (1x)
Biol. Unit 3:  G,H  (1x)
Biol. Unit 4:  A,B  (1x)
Keywords :  Hydrolase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  M. Kotaka, R. Graeff, Z. Chen, L. H. Zhang, H. C. Lee, Q. Hao
Structural Studies Of Intermediates Along The Cyclization Pathway Of Aplysia Adp-Ribosyl Cyclase.
J. Mol. Biol. V. 415 514 2012
PubMed-ID: 22138343  |  Reference-DOI: 10.1016/J.JMB.2011.11.022

(-) Compounds

Molecule 1 - ADP-RIBOSYL CYLCASE
    Chains: A, B, C, D, E, F, G, H
    EC Number: 3.2.2.5
    Engineered: YES
    Expression System: PICHIA PASTORIS
    Expression System Plasmid: PPICZALPHAA
    Expression System Strain: X-33
    Expression System Taxid: 4922
    Expression System Vector Type: PLASMID
    Organism Common: CALIFORNIA SEA HARE
    Organism Scientific: APLYSIA CALIFORNICA
    Organism Taxid: 6500
    Synonym: ADRC, NAD GLYCOHYDROLASE, NAD(+) NUCLEOSIDASE, NADASE

 Structural Features

(-) Chains, Units

  12345678
Asymmetric Unit : ABCDEFGH
Biological Unit 1 (1x):     EF  
Biological Unit 2 (1x):   CD    
Biological Unit 3 (1x):       GH
Biological Unit 4 (1x): AB      

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 8)

Asymmetric Unit (2, 8)
No.NameCountTypeFull Name
1CXR2Ligand/IonCYCLIC ADENOSINE DIPHOSPHATE-RIBOSE
2NAD6Ligand/IonNICOTINAMIDE-ADENINE-DINUCLEOTIDE
Biological Unit 1 (2, 2)
No.NameCountTypeFull Name
1CXR1Ligand/IonCYCLIC ADENOSINE DIPHOSPHATE-RIBOSE
2NAD1Ligand/IonNICOTINAMIDE-ADENINE-DINUCLEOTIDE
Biological Unit 2 (1, 2)
No.NameCountTypeFull Name
1CXR-1Ligand/IonCYCLIC ADENOSINE DIPHOSPHATE-RIBOSE
2NAD2Ligand/IonNICOTINAMIDE-ADENINE-DINUCLEOTIDE
Biological Unit 3 (2, 2)
No.NameCountTypeFull Name
1CXR1Ligand/IonCYCLIC ADENOSINE DIPHOSPHATE-RIBOSE
2NAD1Ligand/IonNICOTINAMIDE-ADENINE-DINUCLEOTIDE
Biological Unit 4 (1, 2)
No.NameCountTypeFull Name
1CXR-1Ligand/IonCYCLIC ADENOSINE DIPHOSPHATE-RIBOSE
2NAD2Ligand/IonNICOTINAMIDE-ADENINE-DINUCLEOTIDE

(-) Sites  (8, 8)

Asymmetric Unit (8, 8)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREPHE A:76 , TRP A:77 , SER A:78 , GLY A:79 , LEU A:97 , GLU A:98 , ASN A:107 , TRP A:140 , SER A:144 , ARG A:170 , SER A:173 , PHE A:174 , PHE A:175 , GLU A:179 , HOH A:2019BINDING SITE FOR RESIDUE NAD A 301
2AC2SOFTWAREPHE B:76 , TRP B:77 , SER B:78 , GLY B:79 , LEU B:97 , GLU B:98 , ASN B:107 , PHE B:128 , TRP B:140 , SER B:144 , ARG B:170 , SER B:173 , PHE B:174 , PHE B:175 , GLU B:179 , HOH B:2029 , HOH B:2035 , HOH B:2052BINDING SITE FOR RESIDUE NAD B 301
3AC3SOFTWAREPHE C:76 , TRP C:77 , SER C:78 , GLY C:79 , LEU C:97 , GLU C:98 , ASN C:107 , LYS C:129 , TRP C:140 , SER C:144 , SER C:173 , PHE C:174 , PHE C:175 , GLU C:179 , HOH C:2028BINDING SITE FOR RESIDUE NAD C 301
4AC4SOFTWAREPHE D:76 , TRP D:77 , SER D:78 , GLY D:79 , LEU D:97 , GLU D:98 , GLU D:137 , TRP D:140 , SER D:144 , SER D:173 , PHE D:174 , PHE D:175 , GLU D:179 , HOH D:2039BINDING SITE FOR RESIDUE NAD D 301
5AC5SOFTWAREPHE E:76 , TRP E:77 , SER E:78 , GLY E:79 , TYR E:81 , LEU E:97 , GLU E:98 , TRP E:140 , SER E:144 , ARG E:170 , SER E:173 , PHE E:174 , PHE E:175 , GLU E:179 , HOH E:2018 , HOH E:2041BINDING SITE FOR RESIDUE NAD E 301
6AC6SOFTWAREPHE F:76 , TRP F:77 , SER F:78 , GLY F:79 , LEU F:97 , GLU F:98 , PHE F:128 , TRP F:140 , SER F:144 , ARG F:170 , SER F:173 , PHE F:174 , PHE F:175 , GLU F:179BINDING SITE FOR RESIDUE CXR F 303
7AC7SOFTWAREPHE G:76 , TRP G:77 , SER G:78 , GLY G:79 , LEU G:97 , GLU G:98 , ASN G:107 , TRP G:140 , SER G:144 , ARG G:170 , SER G:173 , PHE G:174 , PHE G:175 , GLU G:179 , HOH G:2027BINDING SITE FOR RESIDUE NAD G 301
8AC8SOFTWAREPHE H:76 , TRP H:77 , SER H:78 , GLY H:79 , LEU H:97 , GLU H:98 , PHE H:128 , TRP H:140 , SER H:144 , ARG H:170 , SER H:173 , PHE H:174 , PHE H:175 , GLU H:179 , HOH H:2028BINDING SITE FOR RESIDUE CXR H 303

(-) SS Bonds  (38, 38)

Asymmetric Unit
No.Residues
1A:15 -A:34
2A:51 -A:131
3A:112 -A:125
4A:206 -A:227
5A:239 -A:248
6B:15 -B:34
7B:51 -B:131
8B:112 -B:125
9B:206 -B:227
10B:239 -B:248
11C:15 -C:34
12C:51 -C:131
13C:112 -C:125
14C:206 -C:227
15C:239 -C:248
16D:15 -D:34
17D:51 -D:131
18D:112 -D:125
19D:206 -D:227
20D:239 -D:248
21E:15 -E:34
22E:51 -E:131
23E:112 -E:125
24E:206 -E:227
25E:239 -E:248
26F:51 -F:131
27F:112 -F:125
28F:206 -F:227
29F:239 -F:248
30G:15 -G:34
31G:51 -G:131
32G:112 -G:125
33G:206 -G:227
34G:239 -G:248
35H:51 -H:131
36H:112 -H:125
37H:206 -H:227
38H:239 -H:248

(-) Cis Peptide Bonds  (8, 8)

Asymmetric Unit
No.Residues
1Asn A:117 -Pro A:118
2Asn B:117 -Pro B:118
3Asn C:117 -Pro C:118
4Asn D:117 -Pro D:118
5Asn E:117 -Pro E:118
6Asn F:117 -Pro F:118
7Asn G:117 -Pro G:118
8Asn H:117 -Pro H:118

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 3ZWM)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 3ZWM)

(-) Exons   (0, 0)

(no "Exon" information available for 3ZWM)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:253
 aligned with NADA_APLCA | P29241 from UniProtKB/Swiss-Prot  Length:282

    Alignment length:253
                                    34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274   
           NADA_APLCA    25 IVPTRELENVFLGRCKDYEITRYLDILPRVRSDCSALWKDFFKAFSFKNPCDLDLGSYKDFFTSAQQQLPKNKVMFWSGVYDEAHDYANTGRKYITLEDTLPGYMLNSLVWCGQRANPGFNEKVCPDFKTCPVQARESFWGMASSSYAHSAEGEVTYMVDGSNPKVPAYRPDSFFGKYELPNLTNKVTRVKVIVLHRLGEKIIEKCGAGSLLDLEKLVKAKHFAFDCVENPRAVLFLLCSDNPNARECRLAKR 277
               SCOP domains d3zwma_ A: automated matches                                                                                                                                                                                                                                  SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....hhhhhhhhhhhhhhhhh..........hhhhhhhhhhhhhh...........hhhhhhhhh.......eeeee.hhhhhhhhhh.....ee...hhhhhhhh........................hhhhhhhhhhhhhhhhhhhh.eeeeeeee............hhhhhhhhhhh...eeeeeeeee.............hhhhhhhhhhhhh..eeeeee.hhhhhhhhhhhh........... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3zwm A   1 IVPTRELENVFLGRCKDYEITRYLDILPRVRSDCSALWKDFFKAFSFKNPCDLDLGSYKDFFTSAQQQLPKNKVMFWSGVYDEAHDYANTGRKYITLEDTLPGYMLNSLVWCGQRANPGFNEKVCPDFKTCPVQARESFWGMASSSYAHSAEGEVTYMVDGSNPKVPAYRPDSFFGKYELPNLTNKVTRVKVIVLHRLGEKIIEKCGAGSLLDLEKLVKAKHFAFDCVENPRAVLFLLCSDNPNARECRLAKR 253
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250   


Chain B from PDB  Type:PROTEIN  Length:252
 aligned with NADA_APLCA | P29241 from UniProtKB/Swiss-Prot  Length:282

    Alignment length:252
                                    32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272  
           NADA_APLCA    23 EAIVPTRELENVFLGRCKDYEITRYLDILPRVRSDCSALWKDFFKAFSFKNPCDLDLGSYKDFFTSAQQQLPKNKVMFWSGVYDEAHDYANTGRKYITLEDTLPGYMLNSLVWCGQRANPGFNEKVCPDFKTCPVQARESFWGMASSSYAHSAEGEVTYMVDGSNPKVPAYRPDSFFGKYELPNLTNKVTRVKVIVLHRLGEKIIEKCGAGSLLDLEKLVKAKHFAFDCVENPRAVLFLLCSDNPNARECRL 274
               SCOP domains d3zwmb_ B: automated matches                                                                                                                                                                                                                                 SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .......hhhhhhhhhhhhhhhhh..........hhhhhhhhhhhhhh...........hhhhhhhhh.......eeee..hhhhhhhhhh......hhhhhhhhhhhh...................hhhhhhhhhhhhhhhhhhhhhhhh..eeeeeeee............hhhhhhhhhhh...eeeeeeeee............hhhhhhhhhhhhhh..eeeeee.hhhhhhhhhhhh..hhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 3zwm B  -1 AAIVPTRELENVFLGRCKDYEITRYLDILPRVRSDCSALWKDFFKAFSFKNPCDLDLGSYKDFFTSAQQQLPKNKVMFWSGVYDEAHDYANTGRKYITLEDTLPGYMLNSLVWCGQRANPGFNEKVCPDFKTCPVQARESFWGMASSSYAHSAEGEVTYMVDGSNPKVPAYRPDSFFGKYELPNLTNKVTRVKVIVLHRLGEKIIEKCGAGSLLDLEKLVKAKHFAFDCVENPRAVLFLLCSDNPNARECRL 250
                                     8        18        28        38        48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248  


Chain C from PDB  Type:PROTEIN  Length:254
 aligned with NADA_APLCA | P29241 from UniProtKB/Swiss-Prot  Length:282

    Alignment length:254
                                    32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272    
           NADA_APLCA    23 EAIVPTRELENVFLGRCKDYEITRYLDILPRVRSDCSALWKDFFKAFSFKNPCDLDLGSYKDFFTSAQQQLPKNKVMFWSGVYDEAHDYANTGRKYITLEDTLPGYMLNSLVWCGQRANPGFNEKVCPDFKTCPVQARESFWGMASSSYAHSAEGEVTYMVDGSNPKVPAYRPDSFFGKYELPNLTNKVTRVKVIVLHRLGEKIIEKCGAGSLLDLEKLVKAKHFAFDCVENPRAVLFLLCSDNPNARECRLAK 276
               SCOP domains d3zwmc_ C: automated matches                                                                                                                                                                                                                                   SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .ee....hhhhhhhhhhhhhhhhh..........hhhhhhhhhhhhhh.......hhhhhhhhhhhhh........eeee.hhhhhhhhhh......hhhhhhhhhhhh.................ee.hhhhhhhhhhhhhhhhhhhhhhhh.eeeeeeee............hhhhhhhhhhh...eeeeeeeee.............hhhhhhhhhhhhh..eeeeee.hhhhhhhhhhhh.......... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3zwm C  -1 AAIVPTRELENVFLGRCKDYEITRYLDILPRVRSDCSALWKDFFKAFSFKNPCDLDLGSYKDFFTSAQQQLPKNKVMFWSGVYDEAHDYANTGRKYITLEDTLPGYMLNSLVWCGQRANPGFNEKVCPDFKTCPVQARESFWGMASSSYAHSAEGEVTYMVDGSNPKVPAYRPDSFFGKYELPNLTNKVTRVKVIVLHRLGEKIIEKCGAGSLLDLEKLVKAKHFAFDCVENPRAVLFLLCSDNPNARECRLAK 252
                                     8        18        28        38        48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248    


Chain D from PDB  Type:PROTEIN  Length:251
 aligned with NADA_APLCA | P29241 from UniProtKB/Swiss-Prot  Length:282

    Alignment length:251
                                    33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273 
           NADA_APLCA    24 AIVPTRELENVFLGRCKDYEITRYLDILPRVRSDCSALWKDFFKAFSFKNPCDLDLGSYKDFFTSAQQQLPKNKVMFWSGVYDEAHDYANTGRKYITLEDTLPGYMLNSLVWCGQRANPGFNEKVCPDFKTCPVQARESFWGMASSSYAHSAEGEVTYMVDGSNPKVPAYRPDSFFGKYELPNLTNKVTRVKVIVLHRLGEKIIEKCGAGSLLDLEKLVKAKHFAFDCVENPRAVLFLLCSDNPNARECRL 274
               SCOP domains d3zwmd_ D: automated matches                                                                                                                                                                                                                                SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......hhhhhhhhhhhhhhhhh..........hhhhhhhhhhh..............hhhhhhhhh.......eeeee.hhhhhhhhhh......hhhhhhhhhhhh...................hhhhhhhhhhhhhhhhhhhhhhhh..eeeeeeee............hhhhhhhhhhh...eeeeeeeee............hhhhhhhhhhhhhh..eeeeee.hhhhhhhhhhhh..hhhhh. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3zwm D   0 AIVPTRELENVFLGRCKDYEITRYLDILPRVRSDCSALWKDFFKAFSFKNPCDLDLGSYKDFFTSAQQQLPKNKVMFWSGVYDEAHDYANTGRKYITLEDTLPGYMLNSLVWCGQRANPGFNEKVCPDFKTCPVQARESFWGMASSSYAHSAEGEVTYMVDGSNPKVPAYRPDSFFGKYELPNLTNKVTRVKVIVLHRLGEKIIEKCGAGSLLDLEKLVKAKHFAFDCVENPRAVLFLLCSDNPNARECRL 250
                                     9        19        29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249 


Chain E from PDB  Type:PROTEIN  Length:254
 aligned with NADA_APLCA | P29241 from UniProtKB/Swiss-Prot  Length:282

    Alignment length:254
                                    32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272    
           NADA_APLCA    23 EAIVPTRELENVFLGRCKDYEITRYLDILPRVRSDCSALWKDFFKAFSFKNPCDLDLGSYKDFFTSAQQQLPKNKVMFWSGVYDEAHDYANTGRKYITLEDTLPGYMLNSLVWCGQRANPGFNEKVCPDFKTCPVQARESFWGMASSSYAHSAEGEVTYMVDGSNPKVPAYRPDSFFGKYELPNLTNKVTRVKVIVLHRLGEKIIEKCGAGSLLDLEKLVKAKHFAFDCVENPRAVLFLLCSDNPNARECRLAK 276
               SCOP domains d3zwme_ E: automated matches                                                                                                                                                                                                                                   SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .......hhhhhhhhhhhhhhhhh..........hhhhhhhhhhhhhh...........hhhhhhhhh.......eeeee.hhhhhhhhhh......hhhhhhhhhhhh...................hhhhhhhhhhhhhhhhhhhhhhhhh.eeeeeeee............hhhhhhhhhhh...eeeeeeeee............hhhhhhhhhhhhhh..eeeeee.hhhhhhhhhhhh..hhhhh... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3zwm E  -1 AAIVPTRELENVFLGRCKDYEITRYLDILPRVRSDCSALWKDFFKAFSFKNPCDLDLGSYKDFFTSAQQQLPKNKVMFWSGVYDEAHDYANTGRKYITLEDTLPGYMLNSLVWCGQRANPGFNEKVCPDFKTCPVQARESFWGMASSSYAHSAEGEVTYMVDGSNPKVPAYRPDSFFGKYELPNLTNKVTRVKVIVLHRLGEKIIEKCGAGSLLDLEKLVKAKHFAFDCVENPRAVLFLLCSDNPNARECRLAK 252
                                     8        18        28        38        48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248    


Chain F from PDB  Type:PROTEIN  Length:254
 aligned with NADA_APLCA | P29241 from UniProtKB/Swiss-Prot  Length:282

    Alignment length:254
                                    32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272    
           NADA_APLCA    23 EAIVPTRELENVFLGRCKDYEITRYLDILPRVRSDCSALWKDFFKAFSFKNPCDLDLGSYKDFFTSAQQQLPKNKVMFWSGVYDEAHDYANTGRKYITLEDTLPGYMLNSLVWCGQRANPGFNEKVCPDFKTCPVQARESFWGMASSSYAHSAEGEVTYMVDGSNPKVPAYRPDSFFGKYELPNLTNKVTRVKVIVLHRLGEKIIEKCGAGSLLDLEKLVKAKHFAFDCVENPRAVLFLLCSDNPNARECRLAK 276
               SCOP domains d3zwmf_ F: automated matches                                                                                                                                                                                                                                   SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .......hhhhhhhhhhhhhhhhh..........hhhhhhhhhhhhhh...........hhhhhhhh........eeee..hhhhhhhhhh......hhhhhhhhhhhh........................hhhhhhhhhhhhhhhhhhh..eeeeeeee............hhhhhhhhhhh...eeeeeeeee............hhhhhhhhhhhhhh..eeeeee.hhhhhhhhhhhh..hhhhh... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3zwm F  -1 AAIVPTRELENVFLGRCKDYEITRYLDILPRVRSDCSALWKDFFKAFSFKNPCDLDLGSYKDFFTSAQQQLPKNKVMFWSGVYDEAHDYANTGRKYITLEDTLPGYMLNSLVWCGQRANPGFNEKVCPDFKTCPVQARESFWGMASSSYAHSAEGEVTYMVDGSNPKVPAYRPDSFFGKYELPNLTNKVTRVKVIVLHRLGEKIIEKCGAGSLLDLEKLVKAKHFAFDCVENPRAVLFLLCSDNPNARECRLAK 252
                                     8        18        28        38        48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248    


Chain G from PDB  Type:PROTEIN  Length:251
 aligned with NADA_APLCA | P29241 from UniProtKB/Swiss-Prot  Length:282

    Alignment length:251
                                    34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274 
           NADA_APLCA    25 IVPTRELENVFLGRCKDYEITRYLDILPRVRSDCSALWKDFFKAFSFKNPCDLDLGSYKDFFTSAQQQLPKNKVMFWSGVYDEAHDYANTGRKYITLEDTLPGYMLNSLVWCGQRANPGFNEKVCPDFKTCPVQARESFWGMASSSYAHSAEGEVTYMVDGSNPKVPAYRPDSFFGKYELPNLTNKVTRVKVIVLHRLGEKIIEKCGAGSLLDLEKLVKAKHFAFDCVENPRAVLFLLCSDNPNARECRLA 275
               SCOP domains d3zwmg_ G: automated matches                                                                                                                                                                                                                                SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....hhhhhhhhhhhhhhhhh..........hhhhhhhhhhhh.............hhhhhhhhh........eeee.hhhhhhhhhh......hhhhhhhhhhhh...................hhhhhhhhhhhhhhhhhhhhhhhhh.eeeeeeee............hhhhhhhhhhh...eeeeeeeee............hhhhhhhhhhhhhh..eeeeee.hhhhhhhhhhh...hhhhh.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3zwm G   1 IVPTRELENVFLGRCKDYEITRYLDILPRVRSDCSALWKDFFKAFSFKNPCDLDLGSYKDFFTSAQQQLPKNKVMFWSGVYDEAHDYANTGRKYITLEDTLPGYMLNSLVWCGQRANPGFNEKVCPDFKTCPVQARESFWGMASSSYAHSAEGEVTYMVDGSNPKVPAYRPDSFFGKYELPNLTNKVTRVKVIVLHRLGEKIIEKCGAGSLLDLEKLVKAKHFAFDCVENPRAVLFLLCSDNPNARECRLA 251
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250 


Chain H from PDB  Type:PROTEIN  Length:254
 aligned with NADA_APLCA | P29241 from UniProtKB/Swiss-Prot  Length:282

    Alignment length:254
                                    32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272    
           NADA_APLCA    23 EAIVPTRELENVFLGRCKDYEITRYLDILPRVRSDCSALWKDFFKAFSFKNPCDLDLGSYKDFFTSAQQQLPKNKVMFWSGVYDEAHDYANTGRKYITLEDTLPGYMLNSLVWCGQRANPGFNEKVCPDFKTCPVQARESFWGMASSSYAHSAEGEVTYMVDGSNPKVPAYRPDSFFGKYELPNLTNKVTRVKVIVLHRLGEKIIEKCGAGSLLDLEKLVKAKHFAFDCVENPRAVLFLLCSDNPNARECRLAK 276
               SCOP domains d3zwmh_ H: automated matches                                                                                                                                                                                                                                   SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .......hhhhhhhhhhhhhhhhh..........hhhhhhhhhhhh.............hhhhhhhhh........eee..hhhhhhhhhh......hhhhhhhhhhhh...................hhhhhhhhhhhhhhhhhhhhhhhhh.eeeeeeee............hhhhhhhhhhh...eeeeeeeee............hhhhhhhhhhhhhh..eeeeee.hhhhhhhhhh....hhhhh... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3zwm H  -1 AAIVPTRELENVFLGRCKDYEITRYLDILPRVRSDCSALWKDFFKAFSFKNPCDLDLGSYKDFFTSAQQQLPKNKVMFWSGVYDEAHDYANTGRKYITLEDTLPGYMLNSLVWCGQRANPGFNEKVCPDFKTCPVQARESFWGMASSSYAHSAEGEVTYMVDGSNPKVPAYRPDSFFGKYELPNLTNKVTRVKVIVLHRLGEKIIEKCGAGSLLDLEKLVKAKHFAFDCVENPRAVLFLLCSDNPNARECRLAK 252
                                     8        18        28        38        48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248
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(-) SCOP Domains  (1, 8)

Asymmetric Unit
(-)
Class: Alpha and beta proteins (a/b) (23833)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 3ZWM)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 3ZWM)

(-) Gene Ontology  (6, 6)

Asymmetric Unit(hide GO term definitions)
Chain A,B,C,D,E,F,G,H   (NADA_APLCA | P29241)
molecular function
    GO:0050135    NAD(P)+ nucleosidase activity    Catalysis of the reaction: NAD(P)+ + H2O = ADP-ribose(P) + nicotinamide.
    GO:0003953    NAD+ nucleosidase activity    Catalysis of the reaction: NAD+ + H2O = nicotinamide + ADP-ribose.
    GO:0016787    hydrolase activity    Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3.
    GO:0016740    transferase activity    Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2.
biological process
    GO:0007338    single fertilization    The union of male and female gametes to form a zygote.
cellular component
    GO:0031410    cytoplasmic vesicle    A vesicle found in the cytoplasm of a cell.

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  3zwm
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  NADA_APLCA | P29241
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  3.2.2.5
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        NADA_APLCA | P29241: 1lbe 1r0s 1r12 1r15 1r16 3i9j 3i9k 3i9l 3i9o 3zwn 3zwo 3zwp 3zwv 3zww 3zwx 3zwy

(-) Related Entries Specified in the PDB File

1lbe APLYSIA ADP RIBOSYL CYCLASE
1r0s CRYSTAL STRUCTURE OF ADP-RIBOSYL CYCLASE GLU179ALA MUTANT
1r12 NATIVE APLYSIA ADP RIBOSYL CYCLASE
1r15 APLYSIA ADP RIBOSYL CYCLASE WITH BOUND NICOTINAMIDE AND R5P
1r16 APLYSIA ADP RIBOSYL CYCLASE WITH BOUND PYRIDYLCARBINOL ANDR5P
3zwn CRYSTAL STRUCTURE OF APLYSIA CYCLASE COMPLEXED WITH SUBSTRATE NGD AND PRODUCT CGDPR
3zwo CRYSTAL STRUCTURE OF ADP RIBOSYL CYCLASE COMPLEXED WITH REACTION INTERMEDIATE
3zwp CRYSTAL STRUCTURE OF ADP RIBOSYL CYCLASE COMPLEXED WITH ARA-2'F-ADP-RIBOSE AT 2.1 ANGSTROM
3zwv CRYSTAL STRUCTURE OF ADP-RIBOSYL CYCLASE COMPLEXED WITH ARA-2'F-ADP-RIBOSE AT 2.3 ANGSTROM
3zww CRYSTAL STRUCTURE OF ADP-RIBOSYL CYCLASE COMPLEXED WITH ARA-2'F-ADP-RIBOSE AT 2.3 ANGSTROM
3zwx CRYSTAL STRUCTURE OF ADP-RIBOSYL CYCLASE COMPLEXED WITH 8-BROMO-ADP-RIBOSE
3zwy CRYSTAL STRUCTURE OF ADP-RIBOSYL CYCLASE COMPLEXED WITH 8-BROMO-ADP-RIBOSE AND CYCLIC 8-BROMO-CYCLIC-ADP- RIBOSE