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(-) Description

Title :  APLYSIA ADP RIBOSYL CYCLASE WITH BOUND NICOTINAMIDE AND R5P
 
Authors :  M. L. Love, D. M. E. Szebenyi, I. A. Kriksunov, D. J. Thiel, C. Munshi, R. Graeff, H. C. Lee, Q. Hao
Date :  23 Sep 03  (Deposition) - 09 Mar 04  (Release) - 24 Feb 09  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.40
Chains :  Asym. Unit :  A,B,C,D,E,F,G,H
Biol. Unit 1:  A,B  (1x)
Biol. Unit 2:  C,D  (1x)
Biol. Unit 3:  E,F  (1x)
Biol. Unit 4:  G,H  (1x)
Keywords :  Adp-Ribosyl Cyclase, X-Ray Crystallography, Cyclic Adp- Ribose, Naadp, Ca2+ Signalling, Hydrolase (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  M. L. Love, D. M. Szebenyi, I. A. Kriksunov, D. J. Thiel, C. Munshi, R. Graeff, H. C. Lee, Q. Hao
Adp-Ribosyl Cyclase; Crystal Structures Reveal A Covalent Intermediate.
Structure V. 12 477 2004
PubMed-ID: 15016363  |  Reference-DOI: 10.1016/J.STR.2004.02.006
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - ADP-RIBOSYL CYCLASE
    ChainsA, B, C, D, E, F, G, H
    EC Number3.2.2.5
    EngineeredYES
    Expression SystemESCHERICHIA COLI
    Expression System Taxid562
    Organism CommonCALIFORNIA SEA HARE
    Organism ScientificAPLYSIA CALIFORNICA
    Organism Taxid6500
    SynonymNAD+, NUCLEOSIDASE, NADASE, NAD GLYCOHYDROLASE, ADRC

 Structural Features

(-) Chains, Units

  12345678
Asymmetric Unit ABCDEFGH
Biological Unit 1 (1x)AB      
Biological Unit 2 (1x)  CD    
Biological Unit 3 (1x)    EF  
Biological Unit 4 (1x)      GH

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 24)

Asymmetric Unit (2, 24)
No.NameCountTypeFull Name
1N8Ligand/Ion
2NCA16Ligand/IonNICOTINAMIDE
Biological Unit 1 (1, 4)
No.NameCountTypeFull Name
1N-1Ligand/Ion
2NCA4Ligand/IonNICOTINAMIDE
Biological Unit 2 (1, 4)
No.NameCountTypeFull Name
1N-1Ligand/Ion
2NCA4Ligand/IonNICOTINAMIDE
Biological Unit 3 (1, 4)
No.NameCountTypeFull Name
1N-1Ligand/Ion
2NCA4Ligand/IonNICOTINAMIDE
Biological Unit 4 (1, 4)
No.NameCountTypeFull Name
1N-1Ligand/Ion
2NCA4Ligand/IonNICOTINAMIDE

(-) Sites  (24, 24)

Asymmetric Unit (24, 24)
No.NameEvidenceResiduesDescription
01AC1SOFTWAREGLU A:98 , SER A:108 , TRP A:140BINDING SITE FOR RESIDUE NCA A 319
02AC2SOFTWAREGLU B:98 , TRP B:140 , N B:1179BINDING SITE FOR RESIDUE NCA B 329
03AC3SOFTWAREGLU C:98 , ASN C:107 , SER C:108 , TRP C:140BINDING SITE FOR RESIDUE NCA C 339
04AC4SOFTWAREGLU D:98 , ASN D:107 , TRP D:140 , N D:1179BINDING SITE FOR RESIDUE NCA D 349
05AC5SOFTWAREGLU H:98 , ASN H:107 , SER H:108 , TRP H:140 , N H:1179BINDING SITE FOR RESIDUE NCA H 389
06AC6SOFTWAREVAL B:110 , TRP B:111 , ARG B:136 , PHE B:139 , TRP B:140BINDING SITE FOR RESIDUE NCA B 429
07AC7SOFTWAREVAL D:110 , TRP D:111 , ARG D:136 , PHE D:139 , TRP D:140BINDING SITE FOR RESIDUE NCA D 449
08AC8SOFTWARETRP F:111 , ARG F:136 , PHE F:139 , TRP F:140BINDING SITE FOR RESIDUE NCA F 469
09AC9SOFTWARETRP H:111 , ARG H:136 , PHE H:139 , TRP H:140BINDING SITE FOR RESIDUE NCA H 489
10BC1SOFTWARETRP G:111 , ARG G:136 , PHE G:139 , TRP G:140BINDING SITE FOR RESIDUE NCA G 479
11BC2SOFTWAREVAL E:110 , TRP E:111 , TRP E:140BINDING SITE FOR RESIDUE NCA E 459
12BC3SOFTWARETRP C:111 , ARG C:136 , PHE C:139 , TRP C:140BINDING SITE FOR RESIDUE NCA C 439
13BC4SOFTWAREVAL A:110 , TRP A:111 , PHE A:139 , TRP A:140BINDING SITE FOR RESIDUE NCA A 419
14BC5SOFTWAREGLU G:98 , ASN G:107 , SER G:108 , TRP G:140 , N G:1179BINDING SITE FOR RESIDUE NCA G 379
15BC6SOFTWAREGLU F:98 , ASN F:107 , N F:1179BINDING SITE FOR RESIDUE NCA F 369
16BC7SOFTWAREGLU E:98 , ASN E:107 , N E:1179BINDING SITE FOR RESIDUE NCA E 359
17BC8SOFTWARETRP A:77 , SER A:78 , GLY A:79 , LEU A:97 , SER A:173 , PHE A:174 , GLU A:179BINDING SITE FOR RESIDUE N A 1179
18BC9SOFTWARETRP B:77 , SER B:78 , GLY B:79 , LEU B:97 , SER B:173 , PHE B:174 , GLU B:179 , NCA B:329BINDING SITE FOR RESIDUE N B 1179
19CC1SOFTWARETRP C:77 , SER C:78 , GLY C:79 , LEU C:97 , SER C:173 , PHE C:174 , GLU C:179BINDING SITE FOR RESIDUE N C 1179
20CC2SOFTWARETRP D:77 , SER D:78 , GLY D:79 , LEU D:97 , SER D:173 , PHE D:174 , GLU D:179 , NCA D:349BINDING SITE FOR RESIDUE N D 1179
21CC3SOFTWARETRP E:77 , SER E:78 , GLY E:79 , LEU E:97 , SER E:144 , SER E:173 , PHE E:174 , GLU E:179 , NCA E:359BINDING SITE FOR RESIDUE N E 1179
22CC4SOFTWARETRP F:77 , SER F:78 , GLY F:79 , LEU F:97 , SER F:173 , PHE F:174 , GLU F:179 , NCA F:369BINDING SITE FOR RESIDUE N F 1179
23CC5SOFTWARETRP G:77 , SER G:78 , GLY G:79 , LEU G:97 , SER G:173 , PHE G:174 , GLU G:179 , NCA G:379BINDING SITE FOR RESIDUE N G 1179
24CC6SOFTWARETRP H:77 , SER H:78 , GLY H:79 , LEU H:97 , SER H:144 , SER H:173 , PHE H:174 , GLU H:179 , NCA H:389BINDING SITE FOR RESIDUE N H 1179

(-) SS Bonds  (40, 40)

Asymmetric Unit
No.Residues
1A:15 -A:34
2A:51 -A:131
3A:112 -A:125
4A:206 -A:227
5A:239 -A:248
6B:15 -B:34
7B:51 -B:131
8B:112 -B:125
9B:206 -B:227
10B:239 -B:248
11C:15 -C:34
12C:51 -C:131
13C:112 -C:125
14C:206 -C:227
15C:239 -C:248
16D:15 -D:34
17D:51 -D:131
18D:112 -D:125
19D:206 -D:227
20D:239 -D:248
21E:15 -E:34
22E:51 -E:131
23E:112 -E:125
24E:206 -E:227
25E:239 -E:248
26F:15 -F:34
27F:51 -F:131
28F:112 -F:125
29F:206 -F:227
30F:239 -F:248
31G:15 -G:34
32G:51 -G:131
33G:112 -G:125
34G:206 -G:227
35G:239 -G:248
36H:15 -H:34
37H:51 -H:131
38H:112 -H:125
39H:206 -H:227
40H:239 -H:248

(-) Cis Peptide Bonds  (8, 8)

Asymmetric Unit
No.Residues
1Asn A:117 -Pro A:118
2Asn B:117 -Pro B:118
3Asn C:117 -Pro C:118
4Asn D:117 -Pro D:118
5Asn E:117 -Pro E:118
6Asn F:117 -Pro F:118
7Asn G:117 -Pro G:118
8Asn H:117 -Pro H:118

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 1R15)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 1R15)

(-) Exons   (0, 0)

(no "Exon" information available for 1R15)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it)
Chain A from PDB  Type:PROTEIN  Length:251
 aligned with NADA_APLCA | P29241 from UniProtKB/Swiss-Prot  Length:282

    Alignment length:251
                                    34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274 
           NADA_APLCA    25 IVPTRELENVFLGRCKDYEITRYLDILPRVRSDCSALWKDFFKAFSFKNPCDLDLGSYKDFFTSAQQQLPKNKVMFWSGVYDEAHDYANTGRKYITLEDTLPGYMLNSLVWCGQRANPGFNEKVCPDFKTCPVQARESFWGMASSSYAHSAEGEVTYMVDGSNPKVPAYRPDSFFGKYELPNLTNKVTRVKVIVLHRLGEKIIEKCGAGSLLDLEKLVKAKHFAFDCVENPRAVLFLLCSDNPNARECRLA 275
               SCOP domains d1r15a_ A: ADP ribosyl cyclase                                                                                                                                                                                                                              SCOP domains
               CATH domains 1r15A01 A:1-67,A:100-151 ADP Ribosyl Cyclase; Chain A, domain 1    1r15A02 A:68-99,A:152-251       1r15A01 A:1-67,A:100-151                            1r15A02 A:68-99,A:152-251 NAD(P)-binding Rossmann-like Domain                                        CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....hhhhhhhhhhhhhhhhh..........hhhhhhhhhhhhhh...........hhhhhhhhh........eeee.hhhhhhhhhh......hhhhhhhhhhhh...................hhhhhhhhhhhhhhhhhhhhhhhh..eeeeeeee............hhhhhhhhhhh...eeeeeeeee............hhhhhhhhhhhhhh..eeeeee.hhhhhhhhhhhh..hhhhh.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1r15 A   1 IVPTRELENVFLGRCKDYEITRYLDILPRVRSDCSALWKDFFKAFSFKNPCDLDLGSYKDFFTSAQQQLPKNKVMFWSGVYDEAHDYANTGRKYITLEDTLPGYMLNSLVWCGQRANPGFNEKVCPDFKTCPVQARESFWGMASSSYAHSAEGEVTYMVDGSNPKVPAYRPDSFFGKYELPNLTNKVTRVKVIVLHRLGEKIIEKCGAGSLLDLEKLVKAKHFAFDCVENPRAVLFLLCSDNPNARECRLA 251
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250 

Chain B from PDB  Type:PROTEIN  Length:251
 aligned with NADA_APLCA | P29241 from UniProtKB/Swiss-Prot  Length:282

    Alignment length:251
                                    34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274 
           NADA_APLCA    25 IVPTRELENVFLGRCKDYEITRYLDILPRVRSDCSALWKDFFKAFSFKNPCDLDLGSYKDFFTSAQQQLPKNKVMFWSGVYDEAHDYANTGRKYITLEDTLPGYMLNSLVWCGQRANPGFNEKVCPDFKTCPVQARESFWGMASSSYAHSAEGEVTYMVDGSNPKVPAYRPDSFFGKYELPNLTNKVTRVKVIVLHRLGEKIIEKCGAGSLLDLEKLVKAKHFAFDCVENPRAVLFLLCSDNPNARECRLA 275
               SCOP domains d1r15b_ B: ADP ribosyl cyclase                                                                                                                                                                                                                              SCOP domains
               CATH domains 1r15B01 B:1-67,B:100-151 ADP Ribosyl Cyclase; Chain A, domain 1    1r15B02 B:68-99,B:152-251       1r15B01 B:1-67,B:100-151                            1r15B02 B:68-99,B:152-251 NAD(P)-binding Rossmann-like Domain                                        CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....hhhhhhhhhhhhhhhhh..........hhhhhhhhhhhhhh...........hhhhhhhhh.......eeeee.hhhhhhhhhh......hhhhhhhhhhhh...................hhhhhhhhhhhhhhhhhhhhhhhh..eeeeeeee............hhhhhhhhhhh...eeeeeeeee............hhhhhhhhhhhhhh..eeeeee.hhhhhhhhhhhh..hhhhh.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1r15 B   1 IVPTRELENVFLGRCKDYEITRYLDILPRVRSDCSALWKDFFKAFSFKNPCDLDLGSYKDFFTSAQQQLPKNKVMFWSGVYDEAHDYANTGRKYITLEDTLPGYMLNSLVWCGQRANPGFNEKVCPDFKTCPVQARESFWGMASSSYAHSAEGEVTYMVDGSNPKVPAYRPDSFFGKYELPNLTNKVTRVKVIVLHRLGEKIIEKCGAGSLLDLEKLVKAKHFAFDCVENPRAVLFLLCSDNPNARECRLA 251
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250 

Chain C from PDB  Type:PROTEIN  Length:251
 aligned with NADA_APLCA | P29241 from UniProtKB/Swiss-Prot  Length:282

    Alignment length:251
                                    34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274 
           NADA_APLCA    25 IVPTRELENVFLGRCKDYEITRYLDILPRVRSDCSALWKDFFKAFSFKNPCDLDLGSYKDFFTSAQQQLPKNKVMFWSGVYDEAHDYANTGRKYITLEDTLPGYMLNSLVWCGQRANPGFNEKVCPDFKTCPVQARESFWGMASSSYAHSAEGEVTYMVDGSNPKVPAYRPDSFFGKYELPNLTNKVTRVKVIVLHRLGEKIIEKCGAGSLLDLEKLVKAKHFAFDCVENPRAVLFLLCSDNPNARECRLA 275
               SCOP domains d1r15c_ C: ADP ribosyl cyclase                                                                                                                                                                                                                              SCOP domains
               CATH domains 1r15C01 C:1-67,C:100-151 ADP Ribosyl Cyclase; Chain A, domain 1    1r15C02 C:68-99,C:152-251       1r15C01 C:1-67,C:100-151                            1r15C02 C:68-99,C:152-251 NAD(P)-binding Rossmann-like Domain                                        CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....hhhhhhhhhhhhhhhhh..........hhhhhhhhhhhhhh...........hhhhhhhhh.......eeeee.hhhhhhhhhh......hhhhhhhhhhhh...................hhhhhhhhhhhhhhhhhhhhhhhh..eeeeeeee............hhhhhhhhhhh...eeeeeeeee............hhhhhhhhhhhhhh..eeeeee.hhhhhhhhhhhh..hhhhh.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1r15 C   1 IVPTRELENVFLGRCKDYEITRYLDILPRVRSDCSALWKDFFKAFSFKNPCDLDLGSYKDFFTSAQQQLPKNKVMFWSGVYDEAHDYANTGRKYITLEDTLPGYMLNSLVWCGQRANPGFNEKVCPDFKTCPVQARESFWGMASSSYAHSAEGEVTYMVDGSNPKVPAYRPDSFFGKYELPNLTNKVTRVKVIVLHRLGEKIIEKCGAGSLLDLEKLVKAKHFAFDCVENPRAVLFLLCSDNPNARECRLA 251
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250 

Chain D from PDB  Type:PROTEIN  Length:251
 aligned with NADA_APLCA | P29241 from UniProtKB/Swiss-Prot  Length:282

    Alignment length:251
                                    34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274 
           NADA_APLCA    25 IVPTRELENVFLGRCKDYEITRYLDILPRVRSDCSALWKDFFKAFSFKNPCDLDLGSYKDFFTSAQQQLPKNKVMFWSGVYDEAHDYANTGRKYITLEDTLPGYMLNSLVWCGQRANPGFNEKVCPDFKTCPVQARESFWGMASSSYAHSAEGEVTYMVDGSNPKVPAYRPDSFFGKYELPNLTNKVTRVKVIVLHRLGEKIIEKCGAGSLLDLEKLVKAKHFAFDCVENPRAVLFLLCSDNPNARECRLA 275
               SCOP domains d1r15d_ D: ADP ribosyl cyclase                                                                                                                                                                                                                              SCOP domains
               CATH domains 1r15D01 D:1-67,D:100-151 ADP Ribosyl Cyclase; Chain A, domain 1    1r15D02 D:68-99,D:152-251       1r15D01 D:1-67,D:100-151                            1r15D02 D:68-99,D:152-251 NAD(P)-binding Rossmann-like Domain                                        CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....hhhhhhhhhhhhhhhhh..........hhhhhhhhhhhhhh...........hhhhhhhhh.......eeeee.hhhhhhhhhh......hhhhhhhhhhhh...................hhhhhhhhhhhhhhhhhhhhhhhh..eeeeeeee............hhhhhhhhhhh...eeeeeeeee............hhhhhhhhhhhhhh..eeeeee.hhhhhhhhhhhh..hhhhh.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1r15 D   1 IVPTRELENVFLGRCKDYEITRYLDILPRVRSDCSALWKDFFKAFSFKNPCDLDLGSYKDFFTSAQQQLPKNKVMFWSGVYDEAHDYANTGRKYITLEDTLPGYMLNSLVWCGQRANPGFNEKVCPDFKTCPVQARESFWGMASSSYAHSAEGEVTYMVDGSNPKVPAYRPDSFFGKYELPNLTNKVTRVKVIVLHRLGEKIIEKCGAGSLLDLEKLVKAKHFAFDCVENPRAVLFLLCSDNPNARECRLA 251
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250 

Chain E from PDB  Type:PROTEIN  Length:251
 aligned with NADA_APLCA | P29241 from UniProtKB/Swiss-Prot  Length:282

    Alignment length:251
                                    34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274 
           NADA_APLCA    25 IVPTRELENVFLGRCKDYEITRYLDILPRVRSDCSALWKDFFKAFSFKNPCDLDLGSYKDFFTSAQQQLPKNKVMFWSGVYDEAHDYANTGRKYITLEDTLPGYMLNSLVWCGQRANPGFNEKVCPDFKTCPVQARESFWGMASSSYAHSAEGEVTYMVDGSNPKVPAYRPDSFFGKYELPNLTNKVTRVKVIVLHRLGEKIIEKCGAGSLLDLEKLVKAKHFAFDCVENPRAVLFLLCSDNPNARECRLA 275
               SCOP domains d1r15e_ E: ADP ribosyl cyclase                                                                                                                                                                                                                              SCOP domains
               CATH domains 1r15E01 E:1-67,E:100-151 ADP Ribosyl Cyclase; Chain A, domain 1    1r15E02 E:68-99,E:152-251       1r15E01 E:1-67,E:100-151                            1r15E02 E:68-99,E:152-251 NAD(P)-binding Rossmann-like Domain                                        CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....hhhhhhhhhhhhhhhhh..........hhhhhhhhhhhhhh...........hhhhhhhhh........eeee.hhhhhhhhhh......hhhhhhhhhhhh...................hhhhhhhhhhhhhhhhhhhhhhhh..eeeeeeee............hhhhhhhhhhh...eeeeeeeee............hhhhhhhhhhhhhh..eeeeee.hhhhhhhhhhhh..hhhhh.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1r15 E   1 IVPTRELENVFLGRCKDYEITRYLDILPRVRSDCSALWKDFFKAFSFKNPCDLDLGSYKDFFTSAQQQLPKNKVMFWSGVYDEAHDYANTGRKYITLEDTLPGYMLNSLVWCGQRANPGFNEKVCPDFKTCPVQARESFWGMASSSYAHSAEGEVTYMVDGSNPKVPAYRPDSFFGKYELPNLTNKVTRVKVIVLHRLGEKIIEKCGAGSLLDLEKLVKAKHFAFDCVENPRAVLFLLCSDNPNARECRLA 251
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250 

Chain F from PDB  Type:PROTEIN  Length:251
 aligned with NADA_APLCA | P29241 from UniProtKB/Swiss-Prot  Length:282

    Alignment length:251
                                    34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274 
           NADA_APLCA    25 IVPTRELENVFLGRCKDYEITRYLDILPRVRSDCSALWKDFFKAFSFKNPCDLDLGSYKDFFTSAQQQLPKNKVMFWSGVYDEAHDYANTGRKYITLEDTLPGYMLNSLVWCGQRANPGFNEKVCPDFKTCPVQARESFWGMASSSYAHSAEGEVTYMVDGSNPKVPAYRPDSFFGKYELPNLTNKVTRVKVIVLHRLGEKIIEKCGAGSLLDLEKLVKAKHFAFDCVENPRAVLFLLCSDNPNARECRLA 275
               SCOP domains d1r15f_ F: ADP ribosyl cyclase                                                                                                                                                                                                                              SCOP domains
               CATH domains 1r15F01 F:1-67,F:100-151 ADP Ribosyl Cyclase; Chain A, domain 1    1r15F02 F:68-99,F:152-251       1r15F01 F:1-67,F:100-151                            1r15F02 F:68-99,F:152-251 NAD(P)-binding Rossmann-like Domain                                        CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....hhhhhhhhhhhhhhhhh..........hhhhhhhhhhhhhh...........hhhhhhhhh.......eeeee.hhhhhhhhhh......hhhhhhhhhhhh...................hhhhhhhhhhhhhhhhhhhhhhhh..eeeeeeee............hhhhhhhhhhh...eeeeeeeee............hhhhhhhhhhhhhh..eeeeee.hhhhhhhhhhhh..hhhhh.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1r15 F   1 IVPTRELENVFLGRCKDYEITRYLDILPRVRSDCSALWKDFFKAFSFKNPCDLDLGSYKDFFTSAQQQLPKNKVMFWSGVYDEAHDYANTGRKYITLEDTLPGYMLNSLVWCGQRANPGFNEKVCPDFKTCPVQARESFWGMASSSYAHSAEGEVTYMVDGSNPKVPAYRPDSFFGKYELPNLTNKVTRVKVIVLHRLGEKIIEKCGAGSLLDLEKLVKAKHFAFDCVENPRAVLFLLCSDNPNARECRLA 251
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250 

Chain G from PDB  Type:PROTEIN  Length:251
 aligned with NADA_APLCA | P29241 from UniProtKB/Swiss-Prot  Length:282

    Alignment length:251
                                    34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274 
           NADA_APLCA    25 IVPTRELENVFLGRCKDYEITRYLDILPRVRSDCSALWKDFFKAFSFKNPCDLDLGSYKDFFTSAQQQLPKNKVMFWSGVYDEAHDYANTGRKYITLEDTLPGYMLNSLVWCGQRANPGFNEKVCPDFKTCPVQARESFWGMASSSYAHSAEGEVTYMVDGSNPKVPAYRPDSFFGKYELPNLTNKVTRVKVIVLHRLGEKIIEKCGAGSLLDLEKLVKAKHFAFDCVENPRAVLFLLCSDNPNARECRLA 275
               SCOP domains d1r15g_ G: ADP ribosyl cyclase                                                                                                                                                                                                                              SCOP domains
               CATH domains 1r15G01 G:1-67,G:100-151 ADP Ribosyl Cyclase; Chain A, domain 1    1r15G02 G:68-99,G:152-251       1r15G01 G:1-67,G:100-151                            1r15G02 G:68-99,G:152-251 NAD(P)-binding Rossmann-like Domain                                        CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....hhhhhhhhhhhhhhhhh..........hhhhhhhhhhhhhh...........hhhhhhhhh.......eeeee.hhhhhhhhhh......hhhhhhhhhhhh...................hhhhhhhhhhhhhhhhhhhhhhhhh.eeeeeeee............hhhhhhhhhhh...eeeeeeeee............hhhhhhhhhhhhhh..eeeeee.hhhhhhhhhhhh..hhhhh.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1r15 G   1 IVPTRELENVFLGRCKDYEITRYLDILPRVRSDCSALWKDFFKAFSFKNPCDLDLGSYKDFFTSAQQQLPKNKVMFWSGVYDEAHDYANTGRKYITLEDTLPGYMLNSLVWCGQRANPGFNEKVCPDFKTCPVQARESFWGMASSSYAHSAEGEVTYMVDGSNPKVPAYRPDSFFGKYELPNLTNKVTRVKVIVLHRLGEKIIEKCGAGSLLDLEKLVKAKHFAFDCVENPRAVLFLLCSDNPNARECRLA 251
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250 

Chain H from PDB  Type:PROTEIN  Length:251
 aligned with NADA_APLCA | P29241 from UniProtKB/Swiss-Prot  Length:282

    Alignment length:251
                                    34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274 
           NADA_APLCA    25 IVPTRELENVFLGRCKDYEITRYLDILPRVRSDCSALWKDFFKAFSFKNPCDLDLGSYKDFFTSAQQQLPKNKVMFWSGVYDEAHDYANTGRKYITLEDTLPGYMLNSLVWCGQRANPGFNEKVCPDFKTCPVQARESFWGMASSSYAHSAEGEVTYMVDGSNPKVPAYRPDSFFGKYELPNLTNKVTRVKVIVLHRLGEKIIEKCGAGSLLDLEKLVKAKHFAFDCVENPRAVLFLLCSDNPNARECRLA 275
               SCOP domains d1r15h_ H: ADP ribosyl cyclase                                                                                                                                                                                                                              SCOP domains
               CATH domains 1r15H01 H:1-67,H:100-151 ADP Ribosyl Cyclase; Chain A, domain 1    1r15H02 H:68-99,H:152-251       1r15H01 H:1-67,H:100-151                            1r15H02 H:68-99,H:152-251 NAD(P)-binding Rossmann-like Domain                                        CATH domains
           Pfam domains (1) ---Rib_hydrolayse-1r15H01 H:4-248                                                                                                                                                                                                                       --- Pfam domains (1)
           Pfam domains (2) ---Rib_hydrolayse-1r15H02 H:4-248                                                                                                                                                                                                                       --- Pfam domains (2)
           Pfam domains (3) ---Rib_hydrolayse-1r15H03 H:4-248                                                                                                                                                                                                                       --- Pfam domains (3)
           Pfam domains (4) ---Rib_hydrolayse-1r15H04 H:4-248                                                                                                                                                                                                                       --- Pfam domains (4)
           Pfam domains (5) ---Rib_hydrolayse-1r15H05 H:4-248                                                                                                                                                                                                                       --- Pfam domains (5)
           Pfam domains (6) ---Rib_hydrolayse-1r15H06 H:4-248                                                                                                                                                                                                                       --- Pfam domains (6)
           Pfam domains (7) ---Rib_hydrolayse-1r15H07 H:4-248                                                                                                                                                                                                                       --- Pfam domains (7)
           Pfam domains (8) ---Rib_hydrolayse-1r15H08 H:4-248                                                                                                                                                                                                                       --- Pfam domains (8)
         Sec.struct. author .....hhhhhhhhhhhhhhhhh..........hhhhhhhhhhhhhh...........hhhhhhhhh........eeee.hhhhhhhhhh......hhhhhhhhhhhh...................hhhhhhhhhhhhhhhhhhhhhhhh..eeeeeeee............hhhhhhhhhhh...eeeeeeeee............hhhhhhhhhhhhhh..eeeeee.hhhhhhhhhhhh..hhhhh.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1r15 H   1 IVPTRELENVFLGRCKDYEITRYLDILPRVRSDCSALWKDFFKAFSFKNPCDLDLGSYKDFFTSAQQQLPKNKVMFWSGVYDEAHDYANTGRKYITLEDTLPGYMLNSLVWCGQRANPGFNEKVCPDFKTCPVQARESFWGMASSSYAHSAEGEVTYMVDGSNPKVPAYRPDSFFGKYELPNLTNKVTRVKVIVLHRLGEKIIEKCGAGSLLDLEKLVKAKHFAFDCVENPRAVLFLLCSDNPNARECRLA 251
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250 

   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 8)

Asymmetric Unit

(-) CATH Domains  (2, 16)

Asymmetric Unit
(-)
Class: Alpha Beta (26913)
1a1r15A02A:68-99,A:152-251
1b1r15E02E:68-99,E:152-251
1c1r15F02F:68-99,F:152-251
1d1r15G02G:68-99,G:152-251
1e1r15H02H:68-99,H:152-251
1f1r15B02B:68-99,B:152-251
1g1r15C02C:68-99,C:152-251
1h1r15D02D:68-99,D:152-251
2a1r15A01A:1-67,A:100-151
2b1r15B01B:1-67,B:100-151
2c1r15C01C:1-67,C:100-151
2d1r15D01D:1-67,D:100-151
2e1r15E01E:1-67,E:100-151
2f1r15F01F:1-67,F:100-151
2g1r15G01G:1-67,G:100-151
2h1r15H01H:1-67,H:100-151

(-) Pfam Domains  (1, 8)

Asymmetric Unit

(-) Gene Ontology  (6, 6)

Asymmetric Unit(hide GO term definitions)
Chain A,B,C,D,E,F,G,H   (NADA_APLCA | P29241)
molecular function
    GO:0050135    NAD(P)+ nucleosidase activity    Catalysis of the reaction: NAD(P)+ + H2O = ADP-ribose(P) + nicotinamide.
    GO:0003953    NAD+ nucleosidase activity    Catalysis of the reaction: NAD+ + H2O = nicotinamide + ADP-ribose.
    GO:0016787    hydrolase activity    Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3.
    GO:0016740    transferase activity    Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2.
biological process
    GO:0007338    single fertilization    The union of male and female gametes to form a zygote.
cellular component
    GO:0031410    cytoplasmic vesicle    A vesicle found in the cytoplasm of a cell.

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        NADA_APLCA | P292411lbe 1r0s 1r12 1r16 3i9j 3i9k 3i9l 3i9o 3zwm 3zwn 3zwo 3zwp 3zwv 3zww 3zwx 3zwy

(-) Related Entries Specified in the PDB File

1isg CRYSTAL STRUCTURE ANALYSIS OF BST-1/CD157 WITH ATPGAMMAS
1ish CRYSTAL STRUCTURE ANALYSIS OF BST-1/CD157 COMPLEXED WITH ETHENONADP
1isi CRYSTAL STRUCTURE ANALYSIS OF BST-1/CD157 COMPLEXED WITH ETHENONAD
1isj CRYSTAL STRUCTURE ANALYSIS OF BST-1/CD157 COMPLEXED WITH NMN
1ism CRYSTAL STRUCTURE ANALYSIS OF BST-1/CD157 COMPLEXED WITH NICOTINAMIDE
1lbe APLYSIA ADP RIBOSYL CYCLASE
1r0s APLYSIA CYCLASE GLU179ALA MUTANT
1r12 NATIVE APLYSIA ADP RIBOSYL CYCLASE
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