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(-) Description

Title :  N-TERMINAL DOMAIN OF C. REINHARDTII SAS-6 HOMOLOG BLD12P
 
Authors :  D. Kitagawa, I. Vakonakis, N. Olieric, M. Hilbert, D. Keller, V. Olieri M. Bortfeld, M. C. Erat, I. Flueckiger, P. Goenczy, M. O. Steinmetz
Date :  16 Dec 10  (Deposition) - 09 Feb 11  (Release) - 20 Apr 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.10
Chains :  Asym. Unit :  A,B,C,D,E,F
Biol. Unit 1:  A,B  (1x)
Biol. Unit 2:  C,D  (1x)
Biol. Unit 3:  E,F  (1x)
Keywords :  Centrosome Protein, Structural Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  D. Kitagawa, I. Vakonakis, N. Olieric, M. Hilbert, D. Keller, V. Olieric, M. Bortfeld, M. C. Erat, I. Fluckiger, P. Gonczy, M. O. Steinmetz
Structural Basis Of The 9-Fold Symmetry Of Centrioles.
Cell(Cambridge, Mass. ) V. 144 364 2011
PubMed-ID: 21277013  |  Reference-DOI: 10.1016/J.CELL.2011.01.008

(-) Compounds

Molecule 1 - CENTRIOLE PROTEIN
    Chains: A, B, C, D, E, F
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PSTCM1
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 469008
    Expression System Vector Type: PLASMID
    Fragment: UNP RESIDUES 1-159
    Gene: CRSAS-6, CRSAS-6 (BLD12P)
    Organism Scientific: CHLAMYDOMONAS REINHARDTII
    Organism Taxid: 3055

 Structural Features

(-) Chains, Units

  123456
Asymmetric Unit : ABCDEF
Biological Unit 1 (1x): AB    
Biological Unit 2 (1x):   CD  
Biological Unit 3 (1x):     EF

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 3Q0Y)

(-) Sites  (0, 0)

(no "Site" information available for 3Q0Y)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 3Q0Y)

(-) Cis Peptide Bonds  (6, 6)

Asymmetric Unit
No.Residues
1Ser A:121 -Pro A:122
2Ser B:121 -Pro B:122
3Ser C:121 -Pro C:122
4Ser D:121 -Pro D:122
5Ser E:121 -Pro E:122
6Ser F:121 -Pro F:122

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 3Q0Y)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 3Q0Y)

(-) Exons   (0, 0)

(no "Exon" information available for 3Q0Y)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:145
 aligned with A9CQL4_CHLRE | A9CQL4 from UniProtKB/TrEMBL  Length:728

    Alignment length:145
                                    24        34        44        54        64        74        84        94       104       114       124       134       144       154     
         A9CQL4_CHLRE    15 GFDLSTATTLFWRPVPVHVKQQDREDVLEELTFRILTGVAKQNHNLRILRIHISSDSDLFFLHTLEVSEEDFQSLKNDQGILVDFASFPGKIISLLEKCILAQPGDSPRFQAVLTIRGGESVFKIVEINDFKQLPHITLAFRPGN 159
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..hhhhheeeeeeeeeeeee......eeeeeeeeeeeeee..eeeeeeeeeeee........eeeeee.hhhhhhhhhh....hhhhhhhhhhhhhhhhhhh......eeeeeeeee..eeeeeeeee....eeeeeeeeeee.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3q0y A  15 GFDLSTATTLFWRPVPVHVKQQDREDVLEELTFRILTGVAKQNHNLRILRIHISSDSDLFFLHTLEVSEEDFQSLKNDQGILVDFASFPGKIISLLEKCILAQPGDSPRFQAVLTIRGGESVFKIVEINDFKQLPHITLAFRPGN 159
                                    24        34        44        54        64        74        84        94       104       114       124       134       144       154     


Chain B from PDB  Type:PROTEIN  Length:145
 aligned with A9CQL4_CHLRE | A9CQL4 from UniProtKB/TrEMBL  Length:728

    Alignment length:145
                                    23        33        43        53        63        73        83        93       103       113       123       133       143       153     
         A9CQL4_CHLRE    14 TGFDLSTATTLFWRPVPVHVKQQDREDVLEELTFRILTGVAKQNHNLRILRIHISSDSDLFFLHTLEVSEEDFQSLKNDQGILVDFASFPGKIISLLEKCILAQPGDSPRFQAVLTIRGGESVFKIVEINDFKQLPHITLAFRPG 158
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...hhhhheeeeeeeeeeeeee.....eeeeeeeeeeeeee..eeeeeeeeeeee........eeeeeehhhhhhhhhhh.......hhhhhhhhhhhhhhhh......eeeeeeeee..eeeeeeeee....eeeeeeeeeee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3q0y B  14 TGFDLSTATTLFWRPVPVHVKQQDREDVLEELTFRILTGVAKQNHNLRILRIHISSDSDLFFLHTLEVSEEDFQSLKNDQGILVDFASFPGKIISLLEKCILAQPGDSPRFQAVLTIRGGESVFKIVEINDFKQLPHITLAFRPG 158
                                    23        33        43        53        63        73        83        93       103       113       123       133       143       153     


Chain C from PDB  Type:PROTEIN  Length:147
 aligned with A9CQL4_CHLRE | A9CQL4 from UniProtKB/TrEMBL  Length:728

    Alignment length:147
                                    22        32        42        52        62        72        82        92       102       112       122       132       142       152       
         A9CQL4_CHLRE    13 QTGFDLSTATTLFWRPVPVHVKQQDREDVLEELTFRILTGVAKQNHNLRILRIHISSDSDLFFLHTLEVSEEDFQSLKNDQGILVDFASFPGKIISLLEKCILAQPGDSPRFQAVLTIRGGESVFKIVEINDFKQLPHITLAFRPGN 159
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....hhhhheeeeeeeeeeeeee.....eeeeeeeeeeeee.......eeeeeeeee..eeeeeeeeeeehhhhhhhhhhh.......hhhhhhhhhhhhhhhh......eeeeeeeee..eeeeeeeee....eeeeeeeeeee.. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3q0y C  13 QTGFDLSTATTLFWRPVPVHVKQQDREDVLEELTFRILTGVAKQNHNLRILRIHISSDSDLFFLHTLEVSEEDFQSLKNDQGILVDFASFPGKIISLLEKCILAQPGDSPRFQAVLTIRGGESVFKIVEINDFKQLPHITLAFRPGN 159
                                    22        32        42        52        62        72        82        92       102       112       122       132       142       152       


Chain D from PDB  Type:PROTEIN  Length:139
 aligned with A9CQL4_CHLRE | A9CQL4 from UniProtKB/TrEMBL  Length:728

    Alignment length:139
                                    30        40        50        60        70        80        90       100       110       120       130       140       150         
         A9CQL4_CHLRE    21 ATTLFWRPVPVHVKQQDREDVLEELTFRILTGVAKQNHNLRILRIHISSDSDLFFLHTLEVSEEDFQSLKNDQGILVDFASFPGKIISLLEKCILAQPGDSPRFQAVLTIRGGESVFKIVEINDFKQLPHITLAFRPGN 159
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeeeeeeeeee.....eeeeeeeeeeeee.......eeeeeeee.......eeeeeeehhhhhhhhhhh.......hhhhhhhhhhhhhhhh......eeeeeeeee..eeeeeeeee....eeeeeeeeeee.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3q0y D  21 ATTLFWRPVPVHVKQQDREDVLEELTFRILTGVAKQNHNLRILRIHISSDSDLFFLHTLEVSEEDFQSLKNDQGILVDFASFPGKIISLLEKCILAQPGDSPRFQAVLTIRGGESVFKIVEINDFKQLPHITLAFRPGN 159
                                    30        40        50        60        70        80        90       100       110       120       130       140       150         


Chain E from PDB  Type:PROTEIN  Length:146
 aligned with A9CQL4_CHLRE | A9CQL4 from UniProtKB/TrEMBL  Length:728

    Alignment length:146
                                    23        33        43        53        63        73        83        93       103       113       123       133       143       153      
         A9CQL4_CHLRE    14 TGFDLSTATTLFWRPVPVHVKQQDREDVLEELTFRILTGVAKQNHNLRILRIHISSDSDLFFLHTLEVSEEDFQSLKNDQGILVDFASFPGKIISLLEKCILAQPGDSPRFQAVLTIRGGESVFKIVEINDFKQLPHITLAFRPGN 159
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ........eeeeeeeeeeeeee.....eeeeeeeeeeeeee..eeeeeeeeeeeee..eeeeeeeeeeehhhhhhhhhhhh......hhhhhhhhhhhhhhhh......eeeeeeeee..eeeeeeeee....eeeeeeeeeee.. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3q0y E  14 TGFDLSTATTLFWRPVPVHVKQQDREDVLEELTFRILTGVAKQNHNLRILRIHISSDSDLFFLHTLEVSEEDFQSLKNDQGILVDFASFPGKIISLLEKCILAQPGDSPRFQAVLTIRGGESVFKIVEINDFKQLPHITLAFRPGN 159
                                    23        33        43        53        63        73        83        93       103       113       123       133       143       153      


Chain F from PDB  Type:PROTEIN  Length:146
 aligned with A9CQL4_CHLRE | A9CQL4 from UniProtKB/TrEMBL  Length:728

    Alignment length:146
                                    23        33        43        53        63        73        83        93       103       113       123       133       143       153      
         A9CQL4_CHLRE    14 TGFDLSTATTLFWRPVPVHVKQQDREDVLEELTFRILTGVAKQNHNLRILRIHISSDSDLFFLHTLEVSEEDFQSLKNDQGILVDFASFPGKIISLLEKCILAQPGDSPRFQAVLTIRGGESVFKIVEINDFKQLPHITLAFRPGN 159
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...hhhhheeeeeeeeeeeeee.....eeeeeeeeeeeee.......eeeeeeee.......eeeeeeehhhhhhhhhhh.......hhhhhhhhhhhhhhhh......eeeeeeeee..eeeeeeeee....eeeeeeeeeee.. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3q0y F  14 TGFDLSTATTLFWRPVPVHVKQQDREDVLEELTFRILTGVAKQNHNLRILRIHISSDSDLFFLHTLEVSEEDFQSLKNDQGILVDFASFPGKIISLLEKCILAQPGDSPRFQAVLTIRGGESVFKIVEINDFKQLPHITLAFRPGN 159
                                    23        33        43        53        63        73        83        93       103       113       123       133       143       153
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 3Q0Y)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 3Q0Y)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 3Q0Y)

(-) Gene Ontology  (1, 1)

Asymmetric Unit(hide GO term definitions)
Chain A,B,C,D,E,F   (A9CQL4_CHLRE | A9CQL4)
molecular function
    GO:0042802    identical protein binding    Interacting selectively and non-covalently with an identical protein or proteins.

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/TrEMBL
        A9CQL4_CHLRE | A9CQL4: 3q0x 4to7 4tpz 4tq7 4ttw 4ttx 4tty 4ttz 4u2i 4u2j

(-) Related Entries Specified in the PDB File

3pyi 3q0x