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(-) Description

Title :  N-TERMINAL DOMAIN OF C. REINHARDTII SAS-6 HOMOLOG BLD12P Q93E (NN10)
 
Authors :  M. Hilbert, S. H. W. Kraatz
Date :  10 Jun 14  (Deposition) - 24 Jun 15  (Release) - 11 May 16  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.64
Chains :  Asym./Biol. Unit :  A,B
Keywords :  Centriole Sas-6, Cartwheel, Structural Protein, Beta-Sandwich, Alpha- Beta Protein, Centriolar (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  M. Hilbert, A. Noga, D. Frey, V. Hamel, P. Guichard, S. H. Kraatz, M. Pfreundschuh, S. Hosner, I. Fluckiger, R. Jaussi, M. M. Wieser, K. M. Thieltges, X. Deupi, D. J. Muller, R. A. Kammerer, P. Gonczy, M. Hirono, M. O. Steinmetz
Sas-6 Engineering Reveals Interdependence Between Cartwheel And Microtubules In Determining Centriole Architecture.
Nat. Cell Biol. V. 18 393 2016
PubMed-ID: 26999736  |  Reference-DOI: 10.1038/NCB3329
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - CENTRIOLE PROTEIN
    Chains: A, B
    Engineered: YES
    Expression System: ESCHERICHIA COLI BL21(DE3)
    Expression System Taxid: 469008
    Gene: CRSAS-6
    Mutation: YES
    Organism Scientific: CHLAMYDOMONAS REINHARDTII
    Organism Taxid: 3055
    Synonym: N-TERMINAL DOMAIN OF C. REINHARDTII SAS-6 HOMOLOG BLD12P Q93E (NN10)

 Structural Features

(-) Chains, Units

  12
Asymmetric/Biological Unit : AB

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 4TQ7)

(-) Sites  (0, 0)

(no "Site" information available for 4TQ7)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4TQ7)

(-) Cis Peptide Bonds  (2, 2)

Asymmetric/Biological Unit
No.Residues
1Ser A:121 -Pro A:122
2Ser B:121 -Pro B:122

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4TQ7)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4TQ7)

(-) Exons   (0, 0)

(no "Exon" information available for 4TQ7)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:140
                                                                                                                                                                            
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeeeeeeeeee......eeeeeeeeeeeee.......eeeeeeee........eeeeeehhhhhhhhhhhh......hhhhhhhhhhhhhhh.......eeeeeeee....eeeeeeee....eeeeeeeeeee.. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4tq7 A  20 TATTLFWRPVPVHVKQQDREDVLEELTFRILTGVAKQNHNLRILRIHISSDSDLFFLHTLEVSEEDFQSLKNDEGILVDFASFPGKIISLLEKCILAQPGDSPRFQAVLTIRGGESVFKIVEINDFKQLPHITLAFRPGN 159
                                    29        39        49        59        69        79        89        99       109       119       129       139       149       159


Chain B from PDB  Type:PROTEIN  Length:144
                                                                                                                                                                                
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ......eeeeeeeeeeeeee...eeeeeeeeeeeeeee.......eeeeeeee........eeeeeehhhhhhhhhhhh......hhhhhhhhhhhhhhh.......eeeeeeee....eeeeeeee....eeeeeeeeeee.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 4tq7 B  16 FDLSTATTLFWRPVPVHVKQQDREDVLEELTFRILTGVAKQNHNLRILRIHISSDSDLFFLHTLEVSEEDFQSLKNDEGILVDFASFPGKIISLLEKCILAQPGDSPRFQAVLTIRGGESVFKIVEINDFKQLPHITLAFRPGN 159
                                    25        35        45        55        65        75        85        95       105       115       125       135       145       155
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4TQ7)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4TQ7)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4TQ7)

(-) Gene Ontology  (1, 1)

Asymmetric/Biological Unit(hide GO term definitions)

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(no "Sites" information available for 4tq7)
 
  Cis Peptide Bonds
    Ser A:121 - Pro A:122   [ RasMol ]  
    Ser B:121 - Pro B:122   [ RasMol ]  
 

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/TrEMBL
        A9CQL4_CHLRE | A9CQL4: 3q0x 3q0y 4to7 4tpz 4ttw 4ttx 4tty 4ttz 4u2i 4u2j

(-) Related Entries Specified in the PDB File

4to7