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(-) Description

Title :  N-TERMINAL DOMAIN OF C. REINHARDTII SAS-6 HOMOLOG BLD12P VARIANT Q93E F145W (NN27)
 
Authors :  M. Hilbert, S. H. W. Kraatz
Date :  17 Jul 14  (Deposition) - 29 Jul 15  (Release) - 11 May 16  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.00
Chains :  Asym. Unit :  A,B,C,D
Biol. Unit 1:  A,B  (1x)
Biol. Unit 2:  C,D  (1x)
Keywords :  Homodimer, Stabilization, Mutation, Centriole, Sas-6, Cartwheel, Structural Protein, Beta-Sandwich, Alpha-Beta Protein, Centriolar (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  M. Hilbert, A. Noga, D. Frey, V. Hamel, P. Guichard, S. H. Kraatz, M. Pfreundschuh, S. Hosner, I. Fluckiger, R. Jaussi, M. M. Wieser, K. M. Thieltges, X. Deupi, D. J. Muller, R. A. Kammerer, P. Gonczy, M. Hirono, M. O. Steinmetz
Sas-6 Engineering Reveals Interdependence Between Cartwheel And Microtubules In Determining Centriole Architecture.
Nat. Cell Biol. V. 18 393 2016
PubMed-ID: 26999736  |  Reference-DOI: 10.1038/NCB3329
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - CENTRIOLE PROTEIN
    Chains: A, C, D, B
    Engineered: YES
    Expression System: ESCHERICHIA COLI BL21(DE3)
    Expression System Taxid: 469008
    Fragment: UNP RESIDUES 1-159
    Gene: CRSAS-6
    Mutation: YES
    Organism Scientific: CHLAMYDOMONAS REINHARDTII
    Organism Taxid: 3055

 Structural Features

(-) Chains, Units

  1234
Asymmetric Unit : ABCD
Biological Unit 1 (1x): AB  
Biological Unit 2 (1x):   CD

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 4U2J)

(-) Sites  (0, 0)

(no "Site" information available for 4U2J)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4U2J)

(-) Cis Peptide Bonds  (4, 4)

Asymmetric Unit
No.Residues
1Ser A:121 -Pro A:122
2Ser C:121 -Pro C:122
3Ser D:121 -Pro D:122
4Ser B:121 -Pro B:122

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4U2J)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4U2J)

(-) Exons   (0, 0)

(no "Exon" information available for 4U2J)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:142
                                                                                                                                                                              
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeeeeeeeeeeeee.....eeeeeeeeeeeee.hhhh..eeeeeeeee..eeeeeeeeeeehhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhh......eeeeeeee....eeeeeeee....eeeeeeeeeee.. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4u2j A  18 LSTATTLFWRPVPVHVKQQDREDVLEELTFRILTGVAKQNHNLRILRIHISSDSDLFFLHTLEVSEEDFQSLKNDEGILVDFASFPGKIISLLEKCILAQPGDSPRFQAVLTIRGGESVFKIVEINDWKQLPHITLAFRPGN 159
                                    27        37        47        57        67        77        87        97       107       117       127       137       147       157  


Chain B from PDB  Type:PROTEIN  Length:142
                                                                                                                                                                              
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....eeeeeeeeeeeee......eeeeeeeeeeeee.hhhh..eeeeeeee.......eeeeeee..hhhhhhhhh....hhhhhhhhhhhhhhhhhhh......eeeeeeeee..eeeeeeeee....eeeeeeeeeee.. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4u2j B  18 LSTATTLFWRPVPVHVKQQDREDVLEELTFRILTGVAKQNHNLRILRIHISSDSDLFFLHTLEVSEEDFQSLKNDEGILVDFASFPGKIISLLEKCILAQPGDSPRFQAVLTIRGGESVFKIVEINDWKQLPHITLAFRPGN 159
                                    27        37        47        57        67        77        87        97       107       117       127       137       147       157  


Chain C from PDB  Type:PROTEIN  Length:138
                                                                                                                                                                          
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .eeeeeeeeeeeeee.....eeeeeeeeeeeeee..eeeeeeeeeeee.......eeeeeeehhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhh......eeeeeeeee..eeeeeeeee....eeeeeeeeeee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 4u2j C  21 ATTLFWRPVPVHVKQQDREDVLEELTFRILTGVAKQNHNLRILRIHISSDSDLFFLHTLEVSEEDFQSLKNDEGILVDFASFPGKIISLLEKCILAQPGDSPRFQAVLTIRGGESVFKIVEINDWKQLPHITLAFRPG 158
                                    30        40        50        60        70        80        90       100       110       120       130       140       150        


Chain D from PDB  Type:PROTEIN  Length:142
                                                                                                                                                                              
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeeeeeeeeeee.......eeeeeeeeeeeee.hhhh..eeeeeeeee......eeeeeee..hhhhhhhhhh......hhhhhhhhhhhhhhhh.......eeeeeeee..eeeeeeeee....eeeeeeeeeee.. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4u2j D  18 LSTATTLFWRPVPVHVKQQDREDVLEELTFRILTGVAKQNHNLRILRIHISSDSDLFFLHTLEVSEEDFQSLKNDEGILVDFASFPGKIISLLEKCILAQPGDSPRFQAVLTIRGGESVFKIVEINDWKQLPHITLAFRPGN 159
                                    27        37        47        57        67        77        87        97       107       117       127       137       147       157
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4U2J)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4U2J)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4U2J)

(-) Gene Ontology  (1, 1)

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  Cis Peptide Bonds
    Ser A:121 - Pro A:122   [ RasMol ]  
    Ser B:121 - Pro B:122   [ RasMol ]  
    Ser C:121 - Pro C:122   [ RasMol ]  
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/TrEMBL
        A9CQL4_CHLRE | A9CQL4: 3q0x 3q0y 4to7 4tpz 4tq7 4ttw 4ttx 4tty 4ttz 4u2i

(-) Related Entries Specified in the PDB File

(no "Related Entries Specified in the PDB File" available for 4U2J)