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(-) Description

Title :  N-TERMINAL DOMAIN OF C. REINHARDTII SAS-6 HOMOLOG BLD12P VARIANT G94C K146C (NN19)
 
Authors :  M. Hilbert, S. H. W. Kraatz
Date :  23 Jun 14  (Deposition) - 01 Jul 15  (Release) - 11 May 16  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.50
Chains :  Asym. Unit :  A,B,C,D,E,F
Biol. Unit 1:  A,B  (1x)
Biol. Unit 2:  C,D  (1x)
Biol. Unit 3:  E,F  (1x)
Keywords :  Homodimer, Stabilization, Mutation, Centriole Sas-6, Cartwheel, Structural Protein, Beta-Sandwich, Alpha-Beta Protein, Centriolar (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  M. Hilbert, A. Noga, D. Frey, V. Hamel, P. Guichard, S. H. Kraatz, M. Pfreundschuh, S. Hosner, I. Fluckiger, R. Jaussi, M. M. Wieser, K. M. Thieltges, X. Deupi, D. J. Muller, R. A. Kammerer, P. Gonczy, M. Hirono, M. O. Steinmetz
Sas-6 Engineering Reveals Interdependence Between Cartwheel And Microtubules In Determining Centriole Architecture.
Nat. Cell Biol. V. 18 393 2016
PubMed-ID: 26999736  |  Reference-DOI: 10.1038/NCB3329
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - CENTRIOLE PROTEIN
    Chains: A, B, C, D, E, F
    Engineered: YES
    Expression System: ESCHERICHIA COLI BL21(DE3)
    Expression System Taxid: 469008
    Fragment: N-TERMINAL DOMAIN, RESIDUES 1-159
    Gene: CRSAS-6
    Mutation: YES
    Organism Scientific: CHLAMYDOMONAS REINHARDTII
    Organism Taxid: 3055

 Structural Features

(-) Chains, Units

  123456
Asymmetric Unit : ABCDEF
Biological Unit 1 (1x): AB    
Biological Unit 2 (1x):   CD  
Biological Unit 3 (1x):     EF

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 4TTX)

(-) Sites  (0, 0)

(no "Site" information available for 4TTX)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4TTX)

(-) Cis Peptide Bonds  (6, 6)

Asymmetric Unit
No.Residues
1Ser A:121 -Pro A:122
2Ser B:121 -Pro B:122
3Ser C:121 -Pro C:122
4Ser D:121 -Pro D:122
5Ser E:121 -Pro E:122
6Ser F:121 -Pro F:122

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4TTX)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4TTX)

(-) Exons   (0, 0)

(no "Exon" information available for 4TTX)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:145
                                                                                                                                                                                 
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeeeeeeeeeeeeeeee.....eeeeeeeeeeeeee......eeeeeeee........eeeeeehhhhhhhhhhh.......hhhhhhhhhhhhhhh.......eeeeeeee....eeeeeeee....eeeeeeeeeee.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4ttx A  15 GFDLSTATTLFWRPVPVHVKQQDREDVLEELTFRILTGVAKQNHNLRILRIHISSDSDLFFLHTLEVSEEDFQSLKNDQCILVDFASFPGKIISLLEKCILAQPGDSPRFQAVLTIRGGESVFKIVEINDFCQLPHITLAFRPGN 159
                                    24        34        44        54        64        74        84        94       104       114       124       134       144       154     


Chain B from PDB  Type:PROTEIN  Length:144
                                                                                                                                                                                
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .......eeeeeeeeeeee.......eeeeeeeeeeeee.......eeeeeeee.......eeeeeeehhhhhhhhhhh.......hhhhhhhhhhhhhhh.......eeeeeeeee..eeeeeeeee....eeeeeeeeeee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 4ttx B  15 GFDLSTATTLFWRPVPVHVKQQDREDVLEELTFRILTGVAKQNHNLRILRIHISSDSDLFFLHTLEVSEEDFQSLKNDQCILVDFASFPGKIISLLEKCILAQPGDSPRFQAVLTIRGGESVFKIVEINDFCQLPHITLAFRPG 158
                                    24        34        44        54        64        74        84        94       104       114       124       134       144       154    


Chain C from PDB  Type:PROTEIN  Length:145
                                                                                                                                                                                 
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .......eeeeeeeeeeeeee.....eeeeeeeeeeee.........eeeeeee.......eeeeeeehhhhhhhhhhhh......hhhhhhhhhhhhhhh.......eeeeeeeee..eeeeeeeee....eeeeeeeeeee.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4ttx C  15 GFDLSTATTLFWRPVPVHVKQQDREDVLEELTFRILTGVAKQNHNLRILRIHISSDSDLFFLHTLEVSEEDFQSLKNDQCILVDFASFPGKIISLLEKCILAQPGDSPRFQAVLTIRGGESVFKIVEINDFCQLPHITLAFRPGN 159
                                    24        34        44        54        64        74        84        94       104       114       124       134       144       154     


Chain D from PDB  Type:PROTEIN  Length:141
                                                                                                                                                                             
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeeeeeeeeeeee.....eeeeeeeeeeeeee.....eeeeeeeee........eeeee..hhhhhhhhhh.......hhhhhhhhhhhhhhh.......eeeeeeee....eeeeeeee....eeeeeeeeeee.. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4ttx D  19 STATTLFWRPVPVHVKQQDREDVLEELTFRILTGVAKQNHNLRILRIHISSDSDLFFLHTLEVSEEDFQSLKNDQCILVDFASFPGKIISLLEKCILAQPGDSPRFQAVLTIRGGESVFKIVEINDFCQLPHITLAFRPGN 159
                                    28        38        48        58        68        78        88        98       108       118       128       138       148       158 


Chain E from PDB  Type:PROTEIN  Length:145
                                                                                                                                                                                 
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .......eeeeeeeeeeeee......eeeeeeeeeeeee.......eeeeeeee........eeeeeehhhhhhhhhhh.......hhhhhhhhhhhhhhh.......eeeeeeee....eeeeeeee....eeeeeeeeeee.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4ttx E  15 GFDLSTATTLFWRPVPVHVKQQDREDVLEELTFRILTGVAKQNHNLRILRIHISSDSDLFFLHTLEVSEEDFQSLKNDQCILVDFASFPGKIISLLEKCILAQPGDSPRFQAVLTIRGGESVFKIVEINDFCQLPHITLAFRPGN 159
                                    24        34        44        54        64        74        84        94       104       114       124       134       144       154     


Chain F from PDB  Type:PROTEIN  Length:144
                                                                                                                                                                                
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ......eeeeeeeeeeeee.....eeeeeeeeeeeeee.......eeeeeeee........eeeeeehhhhhhhhhhh.......hhhhhhhhhhhhhhh.......eeeeeeee....eeeeeeee....eeeeeeeeeee.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 4ttx F  16 FDLSTATTLFWRPVPVHVKQQDREDVLEELTFRILTGVAKQNHNLRILRIHISSDSDLFFLHTLEVSEEDFQSLKNDQCILVDFASFPGKIISLLEKCILAQPGDSPRFQAVLTIRGGESVFKIVEINDFCQLPHITLAFRPGN 159
                                    25        35        45        55        65        75        85        95       105       115       125       135       145       155
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4TTX)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4TTX)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4TTX)

(-) Gene Ontology  (1, 1)

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  Cis Peptide Bonds
    Ser A:121 - Pro A:122   [ RasMol ]  
    Ser B:121 - Pro B:122   [ RasMol ]  
    Ser C:121 - Pro C:122   [ RasMol ]  
    Ser D:121 - Pro D:122   [ RasMol ]  
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 Related Entries

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        A9CQL4_CHLRE | A9CQL4: 3q0x 3q0y 4to7 4tpz 4tq7 4ttw 4tty 4ttz 4u2i 4u2j

(-) Related Entries Specified in the PDB File

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