Chain C from PDB Type:PROTEIN Length:199
aligned with FIMC_ECOLI | P31697 from UniProtKB/Swiss-Prot Length:241
Alignment length:205
46 56 66 76 86 96 106 116 126 136 146 156 166 176 186 196 206 216 226 236
FIMC_ECOLI 37 GVALGATRVIYPAGQKQEQLAVTNNDENSTYLIQSWVENADGVKDGRFIVTPPLFAMKGKKENTLRILDATNNQLPQDRESLFWMNVKAIPSMDKSKLTENTLQLAIISRIKLYYRPAKLALPPDQAAEKLRFRRSANSLTLINPTPYYLTVTELNAGTRVLENALVPPMGESTVKLPSDAGSNITYRTINDYGALTPKMTGVME 241
SCOP domains d3jwnc1 C:1-121 Periplasmic chaperone FimC d3jwnc2 C:122-205 FimC SCOP domains
CATH domains -3jwnC01 C:2-118 PapD-like ---3jwnC02 C:122-205 [code=2.60.40.1070, no name defined] CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .eee...eeeee.....eeeeeee.....eeeeeeeeee........eeee..eeeee..eeeeeeeee...........eeeeeeeeeee..------..eeeeeeeeeeeeeee......hhhhhhhhheeeee..eeeeee.....eeeeeeee..ee...eee...eeeeee........eeeee..........ee.... Sec.struct. author
SAPs(SNPs) -----------------V-----------------------------------------------------------------------------------------------------------------------------------------------------------A------------------------------- SAPs(SNPs)
PROSITE --------------------------------------------------------------------------PILI_CHAPERONE ----------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
3jwn C 1 GVALGATRVIYPAGQKQEQLAVTNNDENSTYLIQSWVENADGVKDGRFIVTPPLFAMKGKKENTLRILDATNNQLPQDRESLFWMNVKAIPSM------ENTLQLAIISRIKLYYRPAKLALPPDQAAEKLRFRRSANSLTLINPTPYYLTVTELNAGTRVLENALVPPMGESTVKLPSDAGSNITYRTINDYGALTPKMTGVME 205
10 20 30 40 50 60 70 80 90 | 100 110 120 130 140 150 160 170 180 190 200
93 100
Chain E from PDB Type:PROTEIN Length:154
aligned with FIMF_ECOLI | P08189 from UniProtKB/Swiss-Prot Length:176
Alignment length:154
32 42 52 62 72 82 92 102 112 122 132 142 152 162 172
FIMF_ECOLI 23 ADSTITIRGYVRDNGCSVAAESTNFTVDLMENAAKQFNNIGATTPVVPFRILLSPCGNAVSAVKVGFTGVADSHNANLLALENTVSAASGLGIQLLNEQQNQIPLNAPSSALSWTTLTPGKPNTLNFYARLMATQVPVTAGHINATATFTLEYQ 176
SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ...eeeeeeeee...eeeee..ee....hhhhhh............eeeeeeeeee.....eeeeeee..........ee..........eeeeee.................eee......eeeeeeeeeee...........eeeeeeeee. Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
3jwn E 1 ADSTITIRGYVRDNGCSVAAESTNFTVDLMENAAKQFNNIGATTPVVPFRILLSPCGNAVSAVKVGFTGVADSHNANLLALENTVSAAAGLGIQLLNEQQNQIPLNAPSSALSWTTLTPGKPNTLNFYARLMATQVPVTAGHINATATFTLEYQ 154
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150
Chain F from PDB Type:PROTEIN Length:154
aligned with FIMF_ECOLI | P08189 from UniProtKB/Swiss-Prot Length:176
Alignment length:154
32 42 52 62 72 82 92 102 112 122 132 142 152 162 172
FIMF_ECOLI 23 ADSTITIRGYVRDNGCSVAAESTNFTVDLMENAAKQFNNIGATTPVVPFRILLSPCGNAVSAVKVGFTGVADSHNANLLALENTVSAASGLGIQLLNEQQNQIPLNAPSSALSWTTLTPGKPNTLNFYARLMATQVPVTAGHINATATFTLEYQ 176
SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..eeeeeeeeee...eee.hhhhheeeeeeeee.............eeeeeeeeee.....eeeeeee..ee..eeeeee..........eeeeeee.................ee......eeeeeeeeeee.......eeeeeeeeeeeee. Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
3jwn F 1 ADSTITIRGYVRDNGCSVAAESTNFTVDLMENAAKQFNNIGATTPVVPFRILLSPCGNAVSAVKVGFTGVADSHNANLLALENTVSAAAGLGIQLLNEQQNQIPLNAPSSALSWTTLTPGKPNTLNFYARLMATQVPVTAGHINATATFTLEYQ 154
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150
Chain G from PDB Type:PROTEIN Length:144
aligned with FIMG_ECOLI | P08190 from UniProtKB/Swiss-Prot Length:167
Alignment length:144
33 43 53 63 73 83 93 103 113 123 133 143 153 163
FIMG_ECOLI 24 ADVTITVNGKVVAKPCTVSTTNATVDLGDLYSFSLMSAGAASAWHDVALELTNCPVGTSRVTASFSGAADSTGYYKNQGTAQNIQLELQDDSGNTLNTGATKTVQVDDSSQSAHFPLQVRALTVNGGATQGTIQAVISITYTYS 167
SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
Sec.struct. author ..eeeeeeeee.....ee...eeeeeeeeee........ee...eeeeeeee.......eeeeeee..................eeeee...........eeeee.......eeeeeeeeeee.......eeeeeeeeeeeeee Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
3jwn G 1 ADVTITVNGKVVAKPCTVSTTNATVDLGDLYSFSLMSAGAASAWHDVALELTNCPVGTSRVTASFSGAADSTGYYKNQGTAQNIQLELQDDSGNTLNTGATKTVQVDDSSQSAHFPLQVRALTVNGGATQGTIQAVISITYTYS 144
10 20 30 40 50 60 70 80 90 100 110 120 130 140
Chain H from PDB Type:PROTEIN Length:279
aligned with A0A0R4I961_E | A0A0R4I961 from UniProtKB/TrEMBL Length:279
Alignment length:279
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270
A0A0R4I961_E 1 FACKTANGTAIPIGGGSANVYVNLAPAVNVGQNLVVDLSTQIFCHNDYPETITDYVTLQRGSAYGGVLSSFSGTVKYNGSSYPFPTTSETPRVVYNSRTDKPWPVALYLTPVSSAGGVAIKAGSLIAVLILRQTNNYNSDDFQFVWNIYANNDVVVPTGGCDVSARDVTVTLPDYPGSVPIPLTVYCAKSQNLGYYLSGTTADAGNSIFTNTASFSPAQGVGVQLTRNGTIIPANNTVSLGAVGTSAVSLGLTANYARTGGQVTAGNVQSIIGVTFVYQ 279
SCOP domains d3jwnh1 H:1-158 automated matches d3jwnh2 H:159-279 automated matches SCOP domains
CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .eeee....ee.....eeeeee....ee....eeeee....eeee........eeeee....ee.hhhh...eeeee..eeeee........eee.....ee...eeee.......eeee....eeeeeeeeeee.....eeeeeeeeee...eeee...eee...eeeee......eee...eeee...eeeeeeee......................eeeeeee..ee......eeeeee....ee..eeeeeee.......eeeeeeeeeeeee. Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
3jwn H 1 FACKTANGTAIPIGGGSANVYVNLAPAVNVGQNLVVDLSTQIFCHNDYPETITDYVTLQRGSAYGGVLSSFSGTVKYNGSSYPFPTTSETPRVVYNSRTDKPWPVALYLTPVSSAGGVAIKAGSLIAVLILRQTNNYNSDDFQFVWNIYANNDVVVPTGGCDVSARDVTVTLPDYPGSVPIPLTVYCAKSQNLGYYLSGTTADAGNSIFTNTASFSPAQGVGVQLTRNGTIIPANNTVSLGAVGTSAVSLGLTANYARTGGQVTAGNVQSIIGVTFVYQ 279
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270
Chain I from PDB Type:PROTEIN Length:198
aligned with FIMC_ECOLI | P31697 from UniProtKB/Swiss-Prot Length:241
Alignment length:205
46 56 66 76 86 96 106 116 126 136 146 156 166 176 186 196 206 216 226 236
FIMC_ECOLI 37 GVALGATRVIYPAGQKQEQLAVTNNDENSTYLIQSWVENADGVKDGRFIVTPPLFAMKGKKENTLRILDATNNQLPQDRESLFWMNVKAIPSMDKSKLTENTLQLAIISRIKLYYRPAKLALPPDQAAEKLRFRRSANSLTLINPTPYYLTVTELNAGTRVLENALVPPMGESTVKLPSDAGSNITYRTINDYGALTPKMTGVME 241
SCOP domains d3jwni1 I:1-121 Periplasmic chaperone FimC d3jwni2 I:122-205 FimC SCOP domains
CATH domains -3jwnI01 I:2-118 PapD-like ---3jwnI02 I:122-205 [code=2.60.40.1070, no name defined] CATH domains
Pfam domains (1) Pili_assembly_N-3jwnI01 I:1-121 ------------------Pili_assembly_C-3jwnI03 I:140-201 ---- Pfam domains (1)
Pfam domains (2) Pili_assembly_N-3jwnI02 I:1-121 ------------------Pili_assembly_C-3jwnI04 I:140-201 ---- Pfam domains (2)
Sec.struct. author .eee...eeeee.....eeeeeee.....eeeeeeeeee........eeee..eeeee..eeeeeeeee...........eeeeeeeeeee.-------..eeeeeeeeeeeeeee......hhhhhhhh.eeeee..eeeeee.....eeeeeeee..ee...eee...eeeeee........eeeee..........ee.ee. Sec.struct. author
SAPs(SNPs) -----------------V-----------------------------------------------------------------------------------------------------------------------------------------------------------A------------------------------- SAPs(SNPs)
PROSITE --------------------------------------------------------------------------PILI_CHAPERONE ----------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
3jwn I 1 GVALGATRVIYPAGQKQEQLAVTNNDENSTYLIQSWVENADGVKDGRFIVTPPLFAMKGKKENTLRILDATNNQLPQDRESLFWMNVKAIPS-------ENTLQLAIISRIKLYYRPAKLALPPDQAAEKLRFRRSANSLTLINPTPYYLTVTELNAGTRVLENALVPPMGESTVKLPSDAGSNITYRTINDYGALTPKMTGVME 205
10 20 30 40 50 60 70 80 90 | 100 110 120 130 140 150 160 170 180 190 200
92 100
Chain K from PDB Type:PROTEIN Length:154
aligned with FIMF_ECOLI | P08189 from UniProtKB/Swiss-Prot Length:176
Alignment length:154
32 42 52 62 72 82 92 102 112 122 132 142 152 162 172
FIMF_ECOLI 23 ADSTITIRGYVRDNGCSVAAESTNFTVDLMENAAKQFNNIGATTPVVPFRILLSPCGNAVSAVKVGFTGVADSHNANLLALENTVSAASGLGIQLLNEQQNQIPLNAPSSALSWTTLTPGKPNTLNFYARLMATQVPVTAGHINATATFTLEYQ 176
SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..eeeeeeee.....eeeee..ee......................eeeeeeeeee.....eeeeeee......................eeeeee...........hhhhh.eee......eeeeeeeeeee...........eeeeeeeee. Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
3jwn K 1 ADSTITIRGYVRDNGCSVAAESTNFTVDLMENAAKQFNNIGATTPVVPFRILLSPCGNAVSAVKVGFTGVADSHNANLLALENTVSAAAGLGIQLLNEQQNQIPLNAPSSALSWTTLTPGKPNTLNFYARLMATQVPVTAGHINATATFTLEYQ 154
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150
Chain L from PDB Type:PROTEIN Length:154
aligned with FIMF_ECOLI | P08189 from UniProtKB/Swiss-Prot Length:176
Alignment length:154
32 42 52 62 72 82 92 102 112 122 132 142 152 162 172
FIMF_ECOLI 23 ADSTITIRGYVRDNGCSVAAESTNFTVDLMENAAKQFNNIGATTPVVPFRILLSPCGNAVSAVKVGFTGVADSHNANLLALENTVSAASGLGIQLLNEQQNQIPLNAPSSALSWTTLTPGKPNTLNFYARLMATQVPVTAGHINATATFTLEYQ 176
SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains (1) ----Fimbrial-3jwnL01 L:5-154 Pfam domains (1)
Pfam domains (2) ----Fimbrial-3jwnL02 L:5-154 Pfam domains (2)
Pfam domains (3) ----Fimbrial-3jwnL03 L:5-154 Pfam domains (3)
Pfam domains (4) ----Fimbrial-3jwnL04 L:5-154 Pfam domains (4)
Sec.struct. author ..eeeeeeeeee...eee.hhh.eeeeeeee.hhhhh.........eeeeeeeeee.....eeeeeee..........ee..........eeeeee...........hhhhh..ee......eeeeeeeeeee........eeeeeeeeeeee. Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
3jwn L 1 ADSTITIRGYVRDNGCSVAAESTNFTVDLMENAAKQFNNIGATTPVVPFRILLSPCGNAVSAVKVGFTGVADSHNANLLALENTVSAAAGLGIQLLNEQQNQIPLNAPSSALSWTTLTPGKPNTLNFYARLMATQVPVTAGHINATATFTLEYQ 154
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150
Chain M from PDB Type:PROTEIN Length:144
aligned with FIMG_ECOLI | P08190 from UniProtKB/Swiss-Prot Length:167
Alignment length:144
33 43 53 63 73 83 93 103 113 123 133 143 153 163
FIMG_ECOLI 24 ADVTITVNGKVVAKPCTVSTTNATVDLGDLYSFSLMSAGAASAWHDVALELTNCPVGTSRVTASFSGAADSTGYYKNQGTAQNIQLELQDDSGNTLNTGATKTVQVDDSSQSAHFPLQVRALTVNGGATQGTIQAVISITYTYS 167
SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
Pfam domains (1) ----Fimbrial-3jwnM01 M:5-144 Pfam domains (1)
Pfam domains (2) ----Fimbrial-3jwnM02 M:5-144 Pfam domains (2)
Sec.struct. author ..eeeeeeeee.....ee...eeeeeeeeee.hhh....ee...eeeeeeee.......eeeeeee........ee........eeeeee..........eeeee.......eeeeeeeeeee.......eeeeeeeeeeeeee Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
3jwn M 1 ADVTITVNGKVVAKPCTVSTTNATVDLGDLYSFSLMSAGAASAWHDVALELTNCPVGTSRVTASFSGAADSTGYYKNQGTAQNIQLELQDDSGNTLNTGATKTVQVDDSSQSAHFPLQVRALTVNGGATQGTIQAVISITYTYS 144
10 20 30 40 50 60 70 80 90 100 110 120 130 140
Chain N from PDB Type:PROTEIN Length:279
aligned with A0A0R4I961_E | A0A0R4I961 from UniProtKB/TrEMBL Length:279
Alignment length:279
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270
A0A0R4I961_E 1 FACKTANGTAIPIGGGSANVYVNLAPAVNVGQNLVVDLSTQIFCHNDYPETITDYVTLQRGSAYGGVLSSFSGTVKYNGSSYPFPTTSETPRVVYNSRTDKPWPVALYLTPVSSAGGVAIKAGSLIAVLILRQTNNYNSDDFQFVWNIYANNDVVVPTGGCDVSARDVTVTLPDYPGSVPIPLTVYCAKSQNLGYYLSGTTADAGNSIFTNTASFSPAQGVGVQLTRNGTIIPANNTVSLGAVGTSAVSLGLTANYARTGGQVTAGNVQSIIGVTFVYQ 279
SCOP domains d3jwnn1 N:1-158 automated matches d3jwnn2 N:159-279 automated matches SCOP domains
CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .eeee...........eeeeee..........eeeee....eeee........eeeee....ee.hhhh...eeeee..eeeee........eee.....ee..eeeee.......eeee....eeeeeeeeeee.....eeeeeeeeee...eeee...eee......ee......eee...eeee...eeeeeeee......................eeeeeee..ee......eeeeee....ee...eeeeee.......eeeeeeeeeeeee. Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
3jwn N 1 FACKTANGTAIPIGGGSANVYVNLAPAVNVGQNLVVDLSTQIFCHNDYPETITDYVTLQRGSAYGGVLSSFSGTVKYNGSSYPFPTTSETPRVVYNSRTDKPWPVALYLTPVSSAGGVAIKAGSLIAVLILRQTNNYNSDDFQFVWNIYANNDVVVPTGGCDVSARDVTVTLPDYPGSVPIPLTVYCAKSQNLGYYLSGTTADAGNSIFTNTASFSPAQGVGVQLTRNGTIIPANNTVSLGAVGTSAVSLGLTANYARTGGQVTAGNVQSIIGVTFVYQ 279
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270
Legend: |
|
→ Mismatch |
(orange background) |
|
- |
→ Gap |
(green background, '-', border residues have a numbering label) |
|
|
→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
|
x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
|
extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |