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(-) Description

Title :  NMR STRUCTURE OF THE E. COLI TYPE 1 PILUS SUBUNIT FIMF
 
Authors :  A. D. Gossert, P. Bettendorff, C. Puorger, M. Vetsch, T. Herrmann, F. Fiorito, S. Hiller, R. Glockshuber, K. Wuthrich
Date :  29 Nov 06  (Deposition) - 30 Oct 07  (Release) - 24 Feb 09  (Revision)
Method :  SOLUTION NMR
Resolution :  NOT APPLICABLE
Chains :  NMR Structure  :  A  (20x)
Keywords :  Protein, Cell Adhesion (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  A. D. Gossert, P. Bettendorff, C. Puorger, M. Vetsch, T. Herrmann, R. Glockshuber, K. Wuthrich
Nmr Structure Of The Escherichia Coli Type 1 Pilus Subunit Fimf And Its Interactions With Other Pilus Subunits.
J. Mol. Biol. V. 375 752 2008
PubMed-ID: 18048056  |  Reference-DOI: 10.1016/J.JMB.2007.10.059
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - FIMF
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Strain: BL21(DE3) STAR
    Expression System Taxid: 562
    Expression System Vector: PET 11A
    Expression System Vector Type: VECTOR
    Gene: FIMF
    Organism Scientific: ESCHERICHIA COLI
    Organism Taxid: 562

 Structural Features

(-) Chains, Units

  
NMR Structure (20x): 

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 2JMR)

(-) Sites  (0, 0)

(no "Site" information available for 2JMR)

(-) SS Bonds  (1, 1)

NMR Structure
No.Residues
1A:17 -A:57

(-) Cis Peptide Bonds  (1, 20)

NMR Structure
No.ModelResidues
11, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20Ser A:55 -Pro A:56

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 2JMR)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 2JMR)

(-) Exons   (0, 0)

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(-) Sequences/Alignments

NMR Structure
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:179
 aligned with FIMF_ECOLI | P08189 from UniProtKB/Swiss-Prot  Length:176

    Alignment length:179
                                                                                                                                                                                    176                        
                                    31        41        51        61        71        81        91       101       111       121       131       141       151       161       171    |    -         -         
           FIMF_ECOLI    22 AADSTITIRGYVRDNGCSVAAESTNFTVDLMENAAKQFNNIGATTPVVPFRILLSPCGNAVSAVKVGFTGVADSHNANLLALENTVSAASGLGIQLLNEQQNQIPLNAPSSALSWTTLTPGKPNTLNFYARLMATQVPVTAGHINATATFTLEYQ------------------------   -
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -----Fimbrial-2jmrA01 A:6-155                                                                                                                              ------------------------ Pfam domains
         Sec.struct. author ...................hhhhheeee.....hhhhh.........eee...............eeeee.....................eeeeeee..........hhhhh..............eeeeeee.......ee..eeeeeee................eeee..ee... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2jmr A   1 MADSTITIRGYVRDNGCSVAAESTNFTVDLMENAAKQFNNIGATTPVVPFRILLSPCGNAVSAVKVGFTGVADSHNANLLALENTVSAASGLGIQLLNEQQNQIPLNAPSSALSWTTLTPGKPNTLNFYARLMATQVPVTAGHINATATFTLEYQDNHHHHHHKQADSTITIRGYVRDN 179
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 2JMR)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 2JMR)

(-) Pfam Domains  (1, 1)

NMR Structure
(-)
Clan: Adhesin (36)

(-) Gene Ontology  (2, 2)

NMR Structure(hide GO term definitions)
Chain A   (FIMF_ECOLI | P08189)
biological process
    GO:0007155    cell adhesion    The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules.
cellular component
    GO:0009289    pilus    A proteinaceous hair-like appendage on the surface of bacteria ranging from 2-8 nm in diameter.

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  Cis Peptide Bonds
    Ser A:55 - Pro A:56   [ RasMol ]  
 

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        FIMF_ECOLI | P08189: 3bfq 3bfw 3bwu 3jwn 4j3o 4xob 5iqm 5iqn 5iqo

(-) Related Entries Specified in the PDB File

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