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(-) Description

Title :  DONOR STRAND COMPLEMENTED FAEG OF F4AD FIMBRIAE
 
Authors :  I. Van Molle, K. Moonens, A. Garcia-Pino, L. Buts, J. Bouckaert, H. De
Date :  28 May 09  (Deposition) - 20 Oct 09  (Release) - 05 Feb 14  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.30
Chains :  Asym./Biol. Unit :  A
Keywords :  Immunoglobuline Like Fold, Fimbrium, Cell Adhesion (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  I. Van Molle, K. Moonens, A. Garcia-Pino, L. Buts, M. De Kerpel, L. Wyns, J. Bouckaert, H. De Greve
Structural And Thermodynamic Characterization Of Pre- And Postpolymerization States In The F4 Fimbrial Subunit Faeg
J. Mol. Biol. V. 394 957 2009
PubMed-ID: 19799915  |  Reference-DOI: 10.1016/J.JMB.2009.09.059

(-) Compounds

Molecule 1 - K88 FIMBRIAL PROTEIN AD
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PEXP215
    Expression System Strain: C43(DE3)
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Fragment: FAEGNTD/DSC2
    Gene: FAEG
    Organism Scientific: ESCHERICHIA COLI
    Organism Taxid: 562
    Other Details: THE SEQUENCE CONSISTS OF MG, UNP RESIDUES 43-285 (UNIPROT 14191), A LINKER OF 10 GLYS, AND UNP RESIDUES 22-42 (UNIPROT P14191).
    Synonym: FAEG, K88 PILIN, K88 ANTIGEN

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 3HLR)

(-) Sites  (0, 0)

(no "Site" information available for 3HLR)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 3HLR)

(-) Cis Peptide Bonds  (4, 4)

Asymmetric/Biological Unit
No.Residues
1Thr A:51 -Pro A:52
2Thr A:200 -Asp A:201
3Asp A:201 -Gly A:202
4Gly A:258 -Asp A:259

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 3HLR)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 3HLR)

(-) Exons   (0, 0)

(no "Exon" information available for 3HLR)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:258
 aligned with FAEG3_ECOLX | P14191 from UniProtKB/Swiss-Prot  Length:285

    Alignment length:262
                                                                                                                                                                                                                                                                            285                   
                                    52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282  |      -         -  
          FAEG3_ECOLX    43 RQKWEWKVGTGLNGFGNVLNDLTNGGTKLTITVTGNKPILLGRTKEAFATPVTSGVDGIPHIAFTDYEGASVELRNPDGETEKGLAYFVLPMKNAEGTKVGSVKVNASYAGALGRGGVTSADGELMSLFAEGSHAIFYGGLPTNVKNSELKGGSAAAARTELFGSLSKNDILGQIQRVNANITSLVNVPGSFNENMAYTDGSVVSVAYALGIANGQTIEATFNQAVTTSTQWSAPLNVAITYY-------------------   -
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeeee......eeee.hhh.....eeeee....eeeeeeee........----..eeeeeee.....ee............eeeeeeee........eeeeeeeeeeeeeeee.....eeeeee........................hhhhhhhhhhhhh..hhhhhhhhhhhhh....eeee...............eeeeeeeeee....eeeeee.......eeee..eeeeeeee.......eeee..eeeee. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3hlr A   2 RQKWEWKVGTGLNGFGSVLNDLTNGGTKLTITVTGNKPILLGRTKEAFATPV----DGIPHIAFTDYEGASVELRNPDGETEKGLAYFVLPMKNAEGTKVGSVKVNASYAGALGRGGVTSADGELMSLFAEGSHAIFYGGLPTNVKNSELKGGSAAAARTELFGSLSKNDILGQIQRVNANITSLVNVPGSFNENMAYTDGSVVSVAYALGIANGQTIEATFNQAVTTSTQWSAPLNVAITYYGWMTGDFNGSVDIGGSITA 272
                                    11        21        31        41        51 |    | 61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241  ||   260       270  
                                                                              53   58                                                                                                                                                                                       244|                  
                                                                                                                                                                                                                                                                             254
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 3HLR)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 3HLR)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 3HLR)

(-) Gene Ontology  (2, 2)

Asymmetric/Biological Unit(hide GO term definitions)
Chain A   (FAEG3_ECOLX | P14191)
biological process
    GO:0007155    cell adhesion    The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules.
cellular component
    GO:0009289    pilus    A proteinaceous hair-like appendage on the surface of bacteria ranging from 2-8 nm in diameter.

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  Sites
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  Cis Peptide Bonds
    Asp A:201 - Gly A:202   [ RasMol ]  
    Gly A:258 - Asp A:259   [ RasMol ]  
    Thr A:200 - Asp A:201   [ RasMol ]  
    Thr A:51 - Pro A:52   [ RasMol ]  
 

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  3hlr
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  FAEG3_ECOLX | P14191
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        FAEG3_ECOLX | P14191: 3gea 3gew 3ggh 4wei 4weu

(-) Related Entries Specified in the PDB File

2j6g FAEG FROM F4AC ETEC STRAIN 5_95, PRODUCED IN TOBACCO PLANT CHLOROPLAST
2j6r FAEG FROM F4AC ETEC STRAIN GIS26, PRODUCED IN TOBACCO PLANT CHLOROPLAST
3gea DONOR STRAND COMPLEMENTED FAEG OF F4AD FIMBRIAE
3gew CHAPERONE-PILIN COMPLEX FAEE-FAEG FOR F4AD FIMBRIAE
3gfu CHAPERONE-PILIN COMPLEX FAEE-FAEG FOR F4AC5/95 FIMBRIAE
3ggh DONOR STRAND COMPLEMENTED FAEG OF F4AD FIMBRIAE