Chain A from PDB Type:PROTEIN Length:212
aligned with DNAK_ECOLI | P0A6Y8 from UniProtKB/Swiss-Prot Length:638
Alignment length:212
398 408 418 428 438 448 458 468 478 488 498 508 518 528 538 548 558 568 578 588 598
DNAK_ECOLI 389 VLLLDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDGINPAPRGMPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKASSGLNEDEIQKMVRDAEANAEADRKFEELVQTRNQGDHLLHSTRKQVEEAGDKLPADDKTAIESALTALETALKGEDKAAIEAKMQELAQVSQKLME 600
SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
CATH domains 3dpqA01 A:389-523 Substrate Binding Domain Of DNAk; Chain A, domain 1 3dpqA02 A:524-600 [code=1.20.1270.10, no name defined] CATH domains
Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .....ee...eeeee...eeeeee...ee..eeeeee.ee......eeeeeeee....hhhhheeeeeeeee...........eeeeeee.....eeeeeee....eeeeeee......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...........hhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhh. Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
3dpq A 389 VLLLDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDGINPAPRGMPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKASSGLNEDEIQKMVRDAEANAEADRKFEELVQTRNQGDHLLHSTRKQVEEAGDKLPADDKTAIESALTALETALKGEDKAAIEAKMQELAQVSQKLME 600
398 408 418 428 438 448 458 468 478 488 498 508 518 528 538 548 558 568 578 588 598
Chain B from PDB Type:PROTEIN Length:212
aligned with DNAK_ECOLI | P0A6Y8 from UniProtKB/Swiss-Prot Length:638
Alignment length:212
400 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600
DNAK_ECOLI 391 LLDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDGINPAPRGMPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKASSGLNEDEIQKMVRDAEANAEADRKFEELVQTRNQGDHLLHSTRKQVEEAGDKLPADDKTAIESALTALETALKGEDKAAIEAKMQELAQVSQKLMEIA 602
SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
CATH domains 3dpqB01 B:391-523 Substrate Binding Domain Of DNAk; Chain A, domain 1 3dpqB02 B:524-602 [code=1.20.1270.10, no name defined] CATH domains
Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ........eeeee...eeeeee.......eeeeeeeee.......eeeeeee....hhhhheeeeeeee............eeeeeee.....eeeeeee.......eeee......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhh...... Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
3dpq B 391 LLDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDGINPAPRGMPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKASSGLNEDEIQKMVRDAEANAEADRKFEELVQTRNQGDHLLHSTRKQVEEAGDKLPADDKTAIESALTALETALKGEDKAAIEAKMQELAQVSQKLMEIA 602
400 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600
Chain C from PDB Type:PROTEIN Length:12
aligned with PYRRH_PYRAP | P37362 from UniProtKB/Swiss-Prot Length:20
Alignment length:12
12
PYRRH_PYRAP 3 KGSYLPRPTPPR 14
SCOP domains ------------ SCOP domains
CATH domains ------------ CATH domains
Pfam domains ------------ Pfam domains
Sec.struct. author ...ee....... Sec.struct. author
SAPs(SNPs) ------------ SAPs(SNPs)
PROSITE ------------ PROSITE
Transcript ------------ Transcript
3dpq C 0 KLYaLPRPTPPR 11
| 9
3-ALC
Chain D from PDB Type:PROTEIN Length:9
aligned with PYRRH_PYRAP | P37362 from UniProtKB/Swiss-Prot Length:20
Alignment length:9
PYRRH_PYRAP 3 KGSYLPRPT 11
SCOP domains --------- SCOP domains
CATH domains --------- CATH domains
Pfam domains --------- Pfam domains
Sec.struct. author ...ee.... Sec.struct. author
SAPs(SNPs) --------- SAPs(SNPs)
PROSITE --------- PROSITE
Transcript --------- Transcript
3dpq D 0 KLYaLPRPT 8
|
3-ALC
Chain E from PDB Type:PROTEIN Length:203
aligned with DNAK_ECOLI | P0A6Y8 from UniProtKB/Swiss-Prot Length:638
Alignment length:212
398 408 418 428 438 448 458 468 478 488 498 508 518 528 538 548 558 568 578 588 598
DNAK_ECOLI 389 VLLLDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDGINPAPRGMPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKASSGLNEDEIQKMVRDAEANAEADRKFEELVQTRNQGDHLLHSTRKQVEEAGDKLPADDKTAIESALTALETALKGEDKAAIEAKMQELAQVSQKLME 600
SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
CATH domains 3dpqE01 E:389-523 Substrate Binding Domain Of DNAk; Chain A, domain 1 3dpqE02 E:524-600 [code=1. 20.1270.10, no name defined] CATH domains
Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..........eeeee...eeeeee.......eeeeeee.........eeeeeee....hhhhheeeeeeee............eeeeeee.....eeeeeee.....eeeeee......hhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhh...---------hhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhh. Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
3dpq E 389 VLLLDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDGINPAPRGMPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKASSGLNEDEIQKMVRDAEANAEADRKFEELVQTRNQGDHLLHSTRKQV---------DDKTAIESALTALETALKGEDKAAIEAKMQELAQVSQKLME 600
398 408 418 428 438 448 458 468 478 488 498 508 518 528 538 548 | - | 568 578 588 598
550 560
Chain F from PDB Type:PROTEIN Length:214
aligned with DNAK_ECOLI | P0A6Y8 from UniProtKB/Swiss-Prot Length:638
Alignment length:214
398 408 418 428 438 448 458 468 478 488 498 508 518 528 538 548 558 568 578 588 598
DNAK_ECOLI 389 VLLLDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDGINPAPRGMPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKASSGLNEDEIQKMVRDAEANAEADRKFEELVQTRNQGDHLLHSTRKQVEEAGDKLPADDKTAIESALTALETALKGEDKAAIEAKMQELAQVSQKLMEIA 602
SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
CATH domains 3dpqF01 F:389-523 Substrate Binding Domain Of DNAk; Chain A, domain 1 3dpqF02 F:524-602 [code=1.20.1270.10, no name defined] CATH domains
Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .....ee...eeeee...eeeeee...ee..eeeeeee........eeeeeeee.........eeeeeeeee...........eeeeeee.....eeeeeee.....eeeeee......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhh.hhhhhhh. Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
3dpq F 389 VLLLDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDGINPAPRGMPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKASSGLNEDEIQKMVRDAEANAEADRKFEELVQTRNQGDHLLHSTRKQVEEAGDKLPADDKTAIESALTALETALKGEDKAAIEAKMQELAQVSQKLMEIA 602
398 408 418 428 438 448 458 468 478 488 498 508 518 528 538 548 558 568 578 588 598
Chain G from PDB Type:PROTEIN Length:12
aligned with PYRRH_PYRAP | P37362 from UniProtKB/Swiss-Prot Length:20
Alignment length:12
12
PYRRH_PYRAP 3 KGSYLPRPTPPR 14
SCOP domains ------------ SCOP domains
CATH domains ------------ CATH domains
Pfam domains ------------ Pfam domains
Sec.struct. author ............ Sec.struct. author
SAPs(SNPs) ------------ SAPs(SNPs)
PROSITE ------------ PROSITE
Transcript ------------ Transcript
3dpq G 0 KLYaLPRPTPPR 11
| 9
3-ALC
Chain H from PDB Type:PROTEIN Length:9
aligned with PYRRH_PYRAP | P37362 from UniProtKB/Swiss-Prot Length:20
Alignment length:9
PYRRH_PYRAP 3 KGSYLPRPT 11
SCOP domains --------- SCOP domains
CATH domains --------- CATH domains
Pfam domains --------- Pfam domains
Sec.struct. author ......... Sec.struct. author
SAPs(SNPs) --------- SAPs(SNPs)
PROSITE --------- PROSITE
Transcript --------- Transcript
3dpq H 0 KLYaLPRPT 8
|
3-ALC
Legend: |
|
→ Mismatch |
(orange background) |
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- |
→ Gap |
(green background, '-', border residues have a numbering label) |
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→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
|
x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |