Chain A from PDB Type:PROTEIN Length:158
aligned with GRPE_ECOLI | P09372 from UniProtKB/Swiss-Prot Length:197
Alignment length:164
43 53 63 73 83 93 103 113 123 133 143 153 163 173 183 193
GRPE_ECOLI 34 AEQVDPRDEKVANLEAQLAEAQTRERDGILRVKAEMENLRRRTELDIEKAHKFALEKFINELLPVIDSLDRALEVADKANPDMSAMVEGIELTLKSMLDVVRKFGVEVIAETNVPLDPNVHQAIAMVESDDVAPGNVLGIMQKGYTLNGRTIRAAMVTVAKAKA 197
SCOP domains d1dkga2 A:34-138 Coiled-coil domain of nucleotide exchange factor GrpE d1dkga1 A:139-197 SCOP domains
CATH domains 1dkgA01 A:34-137 [code=3.90.20.20, no name defined] 1dkgA02 A:138-197 CATH domains
Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhh.hhhhhhhhhhhh..------.hhhhhhhhhhhhhhhhhh....eeee...........eee..eee........eeee...eeee..eeee.eeeeeee... Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------------------------------------------------------------------------------------------------------------------GRPE PDB: A:149-192 UniProt: 149-192 ----- PROSITE
Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1dkg A 34 AEQVDPRDEKVANLEAQLAEAQTRERDGILRVKAEMENLRRRTELDIEKAHKFALEKFINELLPVIDSLDRALEVA------MSAMVEDIELTLKSMLDVVRKFGVEVIAETNVPLDPNVHQAIAMVESDDVAPGNVLGIMQKGYTLNGRTIRAAMVTVAKAKA 197
43 53 63 73 83 93 103 | - | 123 133 143 153 163 173 183 193
109 116
Chain B from PDB Type:PROTEIN Length:151
aligned with GRPE_ECOLI | P09372 from UniProtKB/Swiss-Prot Length:197
Alignment length:158
47 57 67 77 87 97 107 117 127 137 147 157 167 177 187
GRPE_ECOLI 38 DPRDEKVANLEAQLAEAQTRERDGILRVKAEMENLRRRTELDIEKAHKFALEKFINELLPVIDSLDRALEVADKANPDMSAMVEGIELTLKSMLDVVRKFGVEVIAETNVPLDPNVHQAIAMVESDDVAPGNVLGIMQKGYTLNGRTIRAAMVTVAKA 195
SCOP domains d1dkgb2 B:38-138 Coiled-coil domain of nucleotide exchange factor GrpE d1dkgb1 B:139-195 SCOP domains
CATH domains 1dkgB01 B:38-137 [code=3.90.20.20, no name defined] 1dkgB02 B:138-194 - CATH domains
Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..-------.hhhhhhhhhhhhhhhhhhhhh.eeee...........eeeeeeee...............eeee..eeee.eeeeeee. Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------------------------------------------------------------------------------------------------------------GRPE PDB: B:149-192 UniProt: 149-192 --- PROSITE
Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1dkg B 38 DPRDEKVANLEAQLAEAQTRERDGILRVKAEMENLRRRTELDIEKAHKFALEKFINELLPVIDSLDRALEV-------MSAMVEDIELTLKSMLDVVRKFGVEVIAETNVPLDPNVHQAIAMVESDDVAPGNVLGIMQKGYTLNGRTIRAAMVTVAKA 195
47 57 67 77 87 97 107| 117 127 137 147 157 167 177 187
108 116
Chain D from PDB Type:PROTEIN Length:376
aligned with DNAK_ECO57 | P0A6Z0 from UniProtKB/Swiss-Prot Length:638
Alignment length:381
12 22 32 42 52 62 72 82 92 102 112 122 132 142 152 162 172 182 192 202 212 222 232 242 252 262 272 282 292 302 312 322 332 342 352 362 372 382
DNAK_ECO57 3 KIIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQDGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEEVQRDVSIMPFKIIAADNGDAWVEVKGQKMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAGRIAGLEVKRIINEPTAAALAYGLDKGTGNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRLINYLVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKVTRAKLESLVEDLVNRSIEPLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFFGKEPRKDVNPDEAVAIGAAVQGGVLT 383
SCOP domains d1dkgd1 D:3-185 Heat shock protein 70kDa, ATPase fragment d1dkgd2 D:186-383 Heat s hock protein 70kDa, ATPase fragment SCOP domains
CATH domains 1dkgD01 D:3-66,D:119-183,D:363-381 1dkgD02 D:67-118 [code=3.30.30.30, no name defined]1dkgD01 D:3-66,D:119-183,D:363-381 1dkgD03 D:185-227,D:316-3 62 1dkgD04 D:228-315 Actin; Chain A, domain 4 1dkgD03 D:185-227,D:316-362 1dkgD01 -- CATH domains
Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ...eee....eeeeeeee..eeee........eee.eeee.....eee.hhhhhh.hhhhhheee.hhh........hhhhhh......eeee.....eeeee..eeeehhhhhhhhhhhhhhhhhhhh................hhhhhhhhhhhhhh.........hhhhhhhhh....-..eeeeeeeee....eeeeeeeee.----...eeeeeeee....hhhhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhh...eeeeee...eee..eee.eeeeeehhhhhhh.hhhhhhhhhhhhhhhh..........eeeee.hhhh.hhhhhhhhhh.............hhhhhhhhh..... Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE (1) ----HSP70_1 ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------HSP70_3 -------------------------------- PROSITE (1)
PROSITE (2) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
PROSITE (3) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (3)
PROSITE (4) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------HSP70_2 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (4)
Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1dkg D 3 KIIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQDGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEEVQRDVSIMPFKIIAADNGDAWVEVKGQKMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAGRIAGLEVKRIINEPTAAALAYGLDK-TGNRTIAVYDLGGGTFDISIIEIDE----KTFEVLATNGDTHLGGEDFDSRLINYLVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKVTRAKLESLVEDLVNRSIELLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFFGKEPRKDVNPDEAVAIGAAVQGGVLT 383
12 22 32 42 52 62 72 82 92 102 112 122 132 142 152 162 172 182| | 192 202 | - | 222 232 242 252 262 272 282 292 302 312 322 332 342 352 362 372 382
183 | 209 214
185
Chain D from PDB Type:PROTEIN Length:376
aligned with DNAK_ECOL6 | P0A6Y9 from UniProtKB/Swiss-Prot Length:638
Alignment length:381
12 22 32 42 52 62 72 82 92 102 112 122 132 142 152 162 172 182 192 202 212 222 232 242 252 262 272 282 292 302 312 322 332 342 352 362 372 382
DNAK_ECOL6 3 KIIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQDGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEEVQRDVSIMPFKIIAADNGDAWVEVKGQKMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAGRIAGLEVKRIINEPTAAALAYGLDKGTGNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRLINYLVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKVTRAKLESLVEDLVNRSIEPLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFFGKEPRKDVNPDEAVAIGAAVQGGVLT 383
SCOP domains d1dkgd1 D:3-185 Heat shock protein 70kDa, ATPase fragment d1dkgd2 D:186-383 Heat s hock protein 70kDa, ATPase fragment SCOP domains
CATH domains 1dkgD01 D:3-66,D:119-183,D:363-381 1dkgD02 D:67-118 [code=3.30.30.30, no name defined]1dkgD01 D:3-66,D:119-183,D:363-381 1dkgD03 D:185-227,D:316-3 62 1dkgD04 D:228-315 Actin; Chain A, domain 4 1dkgD03 D:185-227,D:316-362 1dkgD01 -- CATH domains
Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ...eee....eeeeeeee..eeee........eee.eeee.....eee.hhhhhh.hhhhhheee.hhh........hhhhhh......eeee.....eeeee..eeeehhhhhhhhhhhhhhhhhhhh................hhhhhhhhhhhhhh.........hhhhhhhhh....-..eeeeeeeee....eeeeeeeee.----...eeeeeeee....hhhhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhh...eeeeee...eee..eee.eeeeeehhhhhhh.hhhhhhhhhhhhhhhh..........eeeee.hhhh.hhhhhhhhhh.............hhhhhhhhh..... Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE (2) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------HSP70_2 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
PROSITE (3) ----HSP70_1 ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------HSP70_3 -------------------------------- PROSITE (3)
Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1dkg D 3 KIIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQDGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEEVQRDVSIMPFKIIAADNGDAWVEVKGQKMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAGRIAGLEVKRIINEPTAAALAYGLDK-TGNRTIAVYDLGGGTFDISIIEIDE----KTFEVLATNGDTHLGGEDFDSRLINYLVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKVTRAKLESLVEDLVNRSIELLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFFGKEPRKDVNPDEAVAIGAAVQGGVLT 383
12 22 32 42 52 62 72 82 92 102 112 122 132 142 152 162 172 182| | 192 202 | - | 222 232 242 252 262 272 282 292 302 312 322 332 342 352 362 372 382
183 | 209 214
185
Chain D from PDB Type:PROTEIN Length:376
aligned with DNAK_ECOLI | P0A6Y8 from UniProtKB/Swiss-Prot Length:638
Alignment length:381
12 22 32 42 52 62 72 82 92 102 112 122 132 142 152 162 172 182 192 202 212 222 232 242 252 262 272 282 292 302 312 322 332 342 352 362 372 382
DNAK_ECOLI 3 KIIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQDGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEEVQRDVSIMPFKIIAADNGDAWVEVKGQKMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAGRIAGLEVKRIINEPTAAALAYGLDKGTGNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRLINYLVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKVTRAKLESLVEDLVNRSIEPLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFFGKEPRKDVNPDEAVAIGAAVQGGVLT 383
SCOP domains d1dkgd1 D:3-185 Heat shock protein 70kDa, ATPase fragment d1dkgd2 D:186-383 Heat s hock protein 70kDa, ATPase fragment SCOP domains
CATH domains 1dkgD01 D:3-66,D:119-183,D:363-381 1dkgD02 D:67-118 [code=3.30.30.30, no name defined]1dkgD01 D:3-66,D:119-183,D:363-381 1dkgD03 D:185-227,D:316-3 62 1dkgD04 D:228-315 Actin; Chain A, domain 4 1dkgD03 D:185-227,D:316-362 1dkgD01 -- CATH domains
Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ...eee....eeeeeeee..eeee........eee.eeee.....eee.hhhhhh.hhhhhheee.hhh........hhhhhh......eeee.....eeeee..eeeehhhhhhhhhhhhhhhhhhhh................hhhhhhhhhhhhhh.........hhhhhhhhh....-..eeeeeeeee....eeeeeeeee.----...eeeeeeee....hhhhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhh...eeeeee...eee..eee.eeeeeehhhhhhh.hhhhhhhhhhhhhhhh..........eeeee.hhhh.hhhhhhhhhh.............hhhhhhhhh..... Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE (2) ----HSP70_1 ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------HSP70_3 -------------------------------- PROSITE (2)
PROSITE (3) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------HSP70_2 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (3)
Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1dkg D 3 KIIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQDGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEEVQRDVSIMPFKIIAADNGDAWVEVKGQKMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAGRIAGLEVKRIINEPTAAALAYGLDK-TGNRTIAVYDLGGGTFDISIIEIDE----KTFEVLATNGDTHLGGEDFDSRLINYLVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKVTRAKLESLVEDLVNRSIELLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFFGKEPRKDVNPDEAVAIGAAVQGGVLT 383
12 22 32 42 52 62 72 82 92 102 112 122 132 142 152 162 172 182| | 192 202 | - | 222 232 242 252 262 272 282 292 302 312 322 332 342 352 362 372 382
183 | 209 214
185
Legend: |
|
→ Mismatch |
(orange background) |
|
- |
→ Gap |
(green background, '-', border residues have a numbering label) |
|
|
→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
|
x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
|
extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |