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Class: Mainly Alpha (13335)
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Architecture: Up-down Bundle (3216)
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Topology: Substrate Binding Domain Of Dnak; Chain:A; Domain 2 (103)
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Homologous Superfamily: [code=1.20.1270.10, no name defined] (8)
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Baker's yeast (Saccharomyces cerevisiae) (1)
2QXLB:542-652; A:542-657CRYSTAL STRUCTURE ANALYSIS OF SSE1, A YEAST HSP110
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Escherichia coli. Organism_taxid: 562. (4)
1DKXA:524-603THE SUBSTRATE BINDING DOMAIN OF DNAK IN COMPLEX WITH A SUBSTRATE PEPTIDE, DETERMINED FROM TYPE 1 SELENOMETHIONYL CRYSTALS
1DKYA:524-599; B:524-591THE SUBSTRATE BINDING DOMAIN OF DNAK IN COMPLEX WITH A SUBSTRATE PEPTIDE, DETERMINED FROM TYPE 2 NATIVE CRYSTALS
1DKZA:524-603THE SUBSTRATE BINDING DOMAIN OF DNAK IN COMPLEX WITH A SUBSTRATE PEPTIDE, DETERMINED FROM TYPE 1 NATIVE CRYSTALS
1U00A:520-615HSCA SUBSTRATE BINDING DOMAIN COMPLEXED WITH THE ISCU RECOGNITION PEPTIDE ELPPVKIHC
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Escherichia coli. Organism_taxid: 83333. (3)
3DPOB:524-603; A:524-601CRYSTAL STRUCTURE OF THE SUBSTRATE BINDING DOMAIN OF E. COLI DNAK IN COMPLEX WITH A SHORT PYRRHOCORICIN-DERIVED INHIBITOR PEPTIDE
3DPPB:524-602; A:524-600CRYSTAL STRUCTURE OF THE SUBSTRATE BINDING DOMAIN OF E. COLI DNAK IN COMPLEX WITH A LONG PYRRHOCORICIN-DERIVED INHIBITOR PEPTIDE (FORM A)
3DPQB:524-602; F:524-602; A:524-600; E:524-600CRYSTAL STRUCTURE OF THE SUBSTRATE BINDING DOMAIN OF E. COLI DNAK IN COMPLEX WITH A LONG PYRRHOCORICIN-DERIVED INHIBITOR PEPTIDE (FORM B)
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Homologous Superfamily: [code=1.20.1270.20, no name defined] (10)
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Desulfovibrio desulfuricans. Organism_taxid: 876. (4)
1GN9A:1-139; A:140-223; B:140-223; B:1-139HYBRID CLUSTER PROTEIN FROM DESULFOVIBRIO DESULFURICANS ATCC 27774 X-RAY STRUCTURE AT 2.6A RESOLUTION USING SYNCHROTRON RADIATION AT A WAVELENGTH OF 1.722A
1GNLA:1-139; B:1-139; A:140-223; B:140-223HYBRID CLUSTER PROTEIN FROM DESULFOVIBRIO DESULFURICANS X-RAY STRUCTURE AT 1.25A RESOLUTION USING SYNCHROTRON RADIATION AT A WAVELENGTH OF 0.933A
1OA0A:1-139; A:140-223; B:140-223; B:1-139REDUCED HYBRID CLUSTER PROTEIN FROM DESULFOVIBRIO DESULFURICANS X-RAY STRUCTURE AT 1.25A RESOLUTION
1UPXA:1-139; A:140-223; B:140-223; B:1-139THE CRYSTAL STRUCTURE OF THE HYBRID CLUSTER PROTEIN FROM DESULFOVIBRIO DESULFURICANS CONTAINING MOLECULES IN THE OXIDIZED AND REDUCED STATES.
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Desulfovibrio vulgaris. Organism_taxid: 881. Strain: hildenborough ncimb8303. (3)
1E1DA:1-139; A:140-223HYBRID CLUSTER PROTEIN FROM DESULFOVIBRIO VULGARIS
1E2UA:1-139; A:140-223LOW TEMPERATURE STRUCTURE OF HYBRID CLUSTER PROTEIN FROM DESULFOVIBRIO VULGARIS TO 1.6A
1E9VA:1-139; A:140-223XENON BOUND IN HYDROPHOBIC CHANNEL OF HYBRID CLUSTER PROTEIN FROM DESULFOVIBRIO VULGARIS
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Desulfovibrio vulgaris. Organism_taxid: 881. Strain: hildenborough ncimb8303. (3)
1GNTA:1-139; A:140-223HYBRID CLUSTER PROTEIN FROM DESULFOVIBRIO VULGARIS. X-RAY STRUCTURE AT 1.25A RESOLUTION USING SYNCHROTRON RADIATION.
1OA1A:1-139; A:140-223REDUCED HYBRID CLUSTER PROTEIN (HCP) FROM DESULFOVIBRIO VULGARIS HILDENBOROUGH STRUCTURE AT 1.55A RESOLUTION USING SYNCHROTRON RADIATION.
1W9MA:1-139; A:140-223AS-ISOLATED HYBRID CLUSTER PROTEIN FROM DESULFOVIBRIO VULGARIS X-RAY STRUCTURE AT 1.35A RESOLUTION USING IRON ANOMALOUS SIGNAL
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Homologous Superfamily: [code=1.20.1270.30, no name defined] (14)
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Carboxydothermus hydrogenoformans z- 2901. Organism_taxid: 246194. Strain: z-2901 / dsm 6008. (3)
3B51X:63-237NI,FE-CODH-600 MV STATE
3B52X:63-237NI,FE-CODH-600 MV STATE + CO2
3B53X:63-237NI,FE-CODH-320 MV STATE
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Carboxydothermus hydrogenoformans z- 2901. Organism_taxid: 246194. Strain: z-2901. (1)
3I39X:63-237NI,FE-CODH-320 MV+CN STATE
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Carboxydothermus hydrogenoformans. Organism_taxid: 129958 (4)
1SU6A:63-237CARBON MONOXIDE DEHYDROGENASE FROM CARBOXYDOTHERMUS HYDROGENOFORMANS: CO REDUCED STATE
1SU7A:63-237CARBON MONOXIDE DEHYDROGENASE FROM CARBOXYDOTHERMUS HYDROGENOFORMANS-DTT REDUCED STATE
1SU8A:63-237CARBON MONOXIDE INDUCED DECOMPOSITION OF THE ACTIVE SITE [NI-4FE-5S] CLUSTER OF CO DEHYDROGENASE
1SUFA:63-237CARBON MONOXIDE DEHYDROGENASE FROM CARBOXYDOTHERMUS HYDROGENOFORMANS-INACTIVE STATE
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Clostridium thermoaceticum (Moorella thermoacetica) (2)
3I01A:83-259; B:83-259; C:83-259; D:83-259NATIVE STRUCTURE OF BIFUNCTIONAL CARBON MONOXIDE DEHYDROGENASE/ACETYL-COA SYNTHASE FROM MOORELLA THERMOACETICA, WATER-BOUND C-CLUSTER.
3I04A:83-259; B:83-259; C:83-259; D:83-259CYANIDE-BOUND STRUCTURE OF BIFUNCTIONAL CARBON MONOXIDE DEHYDROGENASE/ACETYL-COA SYNTHASE FROM MOORELLA THERMOACETICA, CYANIDE-BOUND C-CLUSTER
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Moorella thermoacetica. Organism_taxid: 1525. (3)
1MJGA:83-259; B:83-259; C:83-259; D:83-259CRYSTAL STRUCTURE OF BIFUNCTIONAL CARBON MONOXIDE DEHYDROGENASE/ACETYL-COA SYNTHASE(CODH/ACS) FROM MOORELLA THERMOACETICA (F. CLOSTRIDIUM THERMOACETICUM)
1OAOA:63-261; B:63-261NIZN[FE4S4] AND NINI[FE4S4] CLUSTERS IN CLOSED AND OPEN ALPHA SUBUNITS OF ACETYL-COA SYNTHASE/CARBON MONOXIDE DEHYDROGENASE
2Z8YA:83-259; B:83-259; C:83-259; D:83-259XENON-BOUND STRUCTURE OF BIFUNCTIONAL CARBON MONOXIDE DEHYDROGENASE/ACETYL-COA SYNTHASE(CODH/ACS) FROM MOORELLA THERMOACETICA
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Rhodospirillum rubrum. Organism_taxid: 1085. (1)
1JQKA:63-237; B:63-237; C:63-237; D:63-237; E:63-237; F:63-237CRYSTAL STRUCTURE OF CARBON MONOXIDE DEHYDROGENASE FROM RHODOSPIRILLUM RUBRUM
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Homologous Superfamily: AF1782-like domains (2)
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Archaeoglobus fulgidus dsm 4304. Organism_taxid: 224325. Strain: vc-16, dsm 4304, jcm 9628, nbrc 100126. (1)
2OO2A:0-75CRYSTAL STRUCTURE OF PROTEIN AF1782 FROM ARCHAEOGLOBUS FULGIDUS, PFAM DUF357
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Delta h (Methanothermobacter thermautotrophicus str) (1)
2PMRA:3-78CRYSTAL STRUCTURE OF A PROTEIN OF UNKNOWN FUNCTION FROM METHANOBACTERIUM THERMOAUTOTROPHICUM
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Homologous Superfamily: Arfaptin, Rac-binding fragment, chain A (5)
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Galdieria sulphuraria. Organism_taxid: 130081. (1)
3CAZA:12-216; B:12-221CRYSTAL STRUCTURE OF A BAR PROTEIN FROM GALDIERIA SULPHURARIA
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Human (Homo sapiens) (4)
1I49A:23-223; B:23-223CRYSTAL STRUCTURE ANALYSIS OF ARFAPTIN
1I4DA:23-222; B:26-225CRYSTAL STRUCTURE ANALYSIS OF RAC1-GDP COMPLEXED WITH ARFAPTIN (P21)
1I4LA:23-223; B:27-223CRYSTAL STRUCTURE ANALYSIS OF RAC1-GDP IN COMPLEX WITH ARFAPTIN (P41)
1I4TA:23-217; B:26-223CRYSTAL STRUCTURE ANALYSIS OF RAC1-GMPPNP IN COMPLEX WITH ARFAPTIN
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Homologous Superfamily: Avirulence protein AvrPto (2)
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Pseudomonas syringae. Organism_taxid: 317. (1)
2QKWA:29-129STRUCTURAL BASIS FOR ACTIVATION OF PLANT IMMUNITY BY BACTERIAL EFFECTOR PROTEIN AVRPTO
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Pseudomonas syringae. Organism_taxid: 317. (1)
1R5EA:29-129SOLUTION STRUCTURE OF THE FOLDED CORE OF PSEUDOMONAS SYRINGAE EFFECTOR PROTEIN, AVRPTO
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Homologous Superfamily: Bai1-associated protein 2 isoform 1 (2)
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Human (Homo sapiens) (2)
1WDZA:2-232; B:2-232CRYSTAL STRUCTURE OF RCB DOMAIN OF IRSP53
1Y2OA:2-248; B:2-248STRUCTURE OF N-TERMINAL DOMAIN IRSP53/BAIAP2
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Homologous Superfamily: Designed single chain three-helix bundle (1)
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[unclassified] (1)
1LQ7A:1-67DE NOVO DESIGNED PROTEIN MODEL OF RADICAL ENZYMES
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Homologous Superfamily: Families 57/38 glycoside transferase; middle domain (57)
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Fruit fly (Drosophila melanogaster) (57)
1HTYA:412-522GOLGI ALPHA-MANNOSIDASE II
1HWWA:412-522GOLGI ALPHA-MANNOSIDASE II IN COMPLEX WITH SWAINSONINE
1HXKA:412-522GOLGI ALPHA-MANNOSIDASE II IN COMPLEX WITH DEOXYMANNOJIRIMICIN
1PS3A:412-522GOLGI ALPHA-MANNOSIDASE II IN COMPLEX WITH KIFUNENSINE
1QWNA:412-522GOLGI ALPHA-MANNOSIDASE II COVALENT INTERMEDIATE COMPLEX WITH 5-FLUORO-GULOSYL-FLUORIDE
1QWUA:412-522GOLGI ALPHA-MANNOSIDASE II D341N MUTANT COMPLEX WITH 5-F-GULOSIDE
1QX1A:412-522GOLGI ALPHA-MANNOSIDASE II D341N MUTANT COMPLEX WITH 2-F-MANNOSYL-F
1R33A:412-522GOLGI ALPHA-MANNOSIDASE II COMPLEX WITH 5-THIO-D-MANNOPYRANOSYLAMINE
1R34A:412-522GOLGI ALPHA-MANNOSIDASE II COMPLEX WITH 5-THIO-D-MANNOPYRANOSYLAMIDINIUM SALT
1TQSA:412-522GOLGI ALPHA-MANNOSIDASE II IN COMPLEX WITH SALACINOL
1TQTA:412-522GOLGI ALPHA-MANNOSIDASE II IN COMPLEX WITH A DIASTEREOMER OF SALACINOL
1TQUA:412-522GOLGI ALPHA-MANNOSIDASE II IN COMPLEX WITH THE SALACINOL ANALOG GHAVAMIOL
1TQVA:412-522GOLGI ALPHA-MANNOSIDASE II IN COMPLEX WITH SELENO-SALACINOL (BLINTOL)
1TQWA:412-522GOLGI ALPHA-MANNOSIDASE II IN COMPLEX WITH A DIASTEREOMER OF SELENO-SALACINOL
2ALWA:412-522GOLGI ALPHA-MANNOSIDASE II COMPLEX WITH NOEUROMYCIN
2F18A:412-522GOLGI ALPHA-MANNOSIDASE II COMPLEX WITH (2R,3R,4S)-2-({[(1R)-2-HYDROXY-1-PHENYLETHYL]AMINO}METHYL)PYRROLIDINE-3,4-DIOL
2F1AA:412-522GOLGI ALPHA-MANNOSIDASE II COMPLEX WITH (2R,3R,4S)-2-({[(1S)-2-HYDROXY-1-PHENYLETHYL]AMINO}METHYL)PYRROLIDINE-3,4-DIOL
2F1BA:412-522GOLGI ALPHA-MANNOSIDASE II COMPLEX WITH (2R,3R,4S,5R)-2-({[(1R)-2-HYDROXY-1-PHENYLETHYL]AMINO}METHYL)-5-METHYLPYRROLIDINE-3,4-DIOL
2F7OA:412-522GOLGI ALPHA-MANNOSIDASE II COMPLEX WITH MANNOSTATIN A
2F7PA:412-522GOLGI ALPHA-MANNOSIDASE II COMPLEX WITH BENZYL-MANNOSTATIN A
2F7QA:412-522GOLGI ALPHA-MANNOSIDASE II COMPLEX WITH AMINOCYCLOPENTITETROL
2F7RA:412-522GOLGI ALPHA-MANNOSIDASE II COMPLEX WITH BENZYL-AMINOCYCLOPENTITETROL
2FYVA:412-522GOLGI ALPHA-MANNOSIDASE II COMPLEX WITH AN AMINO-SALACINOL CARBOXYLATE ANALOG
2OW6A:412-522GOLGI ALPHA-MANNOSIDASE II COMPLEX WITH (1R,5S,6S,7R,8S)-1-THIONIABICYCLO[4.3.0]NONAN-5,7,8-TRIOL CHLORIDE
2OW7A:412-522GOLGI ALPHA-MANNOSIDASE II COMPLEX WITH (1R,6S,7R,8S)-1-THIONIABICYCLO[4.3.0]NONAN-7,8-DIOL CHLORIDE
3BLBA:412-522CRYSTAL STRUCTURE OF GOLGI MANNOSIDASE II IN COMPLEX WITH SWAINSONINE AT 1.3 ANGSTROM RESOLUTION
3BUBA:412-522GOLGI ALPHA-MANNOSIDASE II WITH AN EMPTY ACTIVE SITE
3BUDA:412-522GOLGI MANNOSIDASE II D204A CATALYTIC NUCLEOPHILE MUTANT WITH AN EMPTY ACTIVE SITE
3BUIA:412-522GOLGI MANNOSIDASE II D204A CATALYTIC NUCLEOPHILE MUTANT COMPLEX WITH TRIS
3BUPA:412-522GOLGI ALPHA-MANNOSIDASE II D341N ACID-BASE CATALYST MUTANT WITH BOUND MANNOSE
3BUQA:412-522GOLGI ALPHA-MANNOSIDASE II D204A CATALYTIC NUCLEOPHILE MUTANT WITH BOUND MANNOSE.
3BVTA:412-522GOLGI MANNOSIDASE II D204A CATALYTIC NUCLEOPHILE MUTANT COMPLEX WITH METHYL (ALPHA-D-MANNOPYRANOSYL)-(1->3)-S-ALPHA-D-MANNOPYRANOSIDE
3BVUA:412-522GOLGI MANNOSIDASE II D204A CATALYTIC NUCLEOPHILE MUTANT COMPLEX WITH METHYL(ALPHA-D-MANNOPYRANOSYL)-(1->3)-S-[(ALPHA-D-MANNOPYRANOSYL)-(1->6)]-ALPHA-D-MANNOPYRANOSIDE
3BVVA:412-522GOLGI MANNOSIDASE II D204A CATALYTIC NUCLEOPHILE MUTANT COMPLEX WITH METHYL ALPHA-D-MANNOPYRANOSYL-(1->3)-[6-THIO-ALPHA-D-MANNOPYRANOSYL-(1->6)]-BETA-D-MANNOPYRANOSIDE
3BVWA:412-522GOLGI MANNOSIDASE II D204A CATALYTIC NUCLEOPHILE MUTANT COMPLEX WITH METHYL (2-DEOXY-2-ACETAMIDO-BETA-D-GLUCOPYRANOSYL)-(1->2)-ALPHA-D-MANNOPYRANOSYL- (1->3)-[ALPHA-D-MANNOPYRANOSYL-(1->6)-6-THIO-ALPHA-D-MANNOPYRANOSYL- (1->6)]-BETA-D-MANNOPYRANOSIDE
3BVXA:412-522GOLGI MANNOSIDASE II D204A CATALYTIC NUCLEOPHILE MUTANT COMPLEX WITH METHYL (2-DEOXY-2-ACETAMIDO-BETA-D-GLUCOPYRANOSYL)-(1->2)-(ALPHA-D-MANNOPYRANOSYL)- (1->3)-[(ALPHA-D-MANNOPYRANOSYL)-(1->6)-(ALPHA-D-MANNOPYRANOSYL)-(1->6)]-BETA-D-MANNOPYRANOSIDE
3CV5A:412-522GOLGI MANNOSIDASE II D204A CATALYTIC NUCLEOPHILE MUTANT COMPLEX WITH 3ALPHA,6ALPHA-MANNOPENTAOSE
3CZNA:412-522GOLGI ALPHA-MANNOSIDASE II (D204A NUCLEOPHILE MUTANT) IN COMPLEX WITH GNMAN5GN
3CZSA:412-522GOLGI ALPHA-MANNOSIDASE II (D204A NUCLEOPHILE MUTANT)
3D4YA:412-522GOLGI MANNOSIDASE II COMPLEX WITH MANNOIMIDAZOLE
3D4ZA:412-522GOLGI MANNOSIDASE II COMPLEX WITH GLUCO-IMIDAZOLE
3D50A:412-522GOLGI MANNOSIDASE II COMPLEX WITH N-OCTYL-6-EPI-VALIENAMINE
3D51A:412-521GOLGI MANNOSIDASE II COMPLEX WITH GLUCO-HYDROXYIMINOLACTAM
3D52A:412-522GOLGI MANNOSIDASE II COMPLEX WITH AN N-ARYL CARBAMATE DERIVATIVE OF GLUCO-HYDROXYIMINOLACTAM
3DDFA:412-522GOLGI MANNOSIDASE II COMPLEX WITH (3R,4R,5R)-3,4-DIHYDROXY-5-({[(1R)-2-HYDROXY-1 PHENYLETHYL]AMINO}METHYL) PYRROLIDIN-2-ONE
3DDGA:412-522GOLGI MANNOSIDASE II COMPLEX WITH (3R,4R,5R)-3,4-DIHYDROXY-5-({[(1R)-2-HYDROXY-1 PHENYLETHYL]AMINO}METHYL) METHYLPYRROLIDIN-2-ONE
3DX0A:412-522GOLGI ALPHA-MANNOSIDASE II IN COMPLEX WITH MANNOSTATIN A AT PH 5.75
3DX1A:412-522GOLGI ALPHA-MANNOSIDASE II IN COMPLEX WITH MANNOSTATIN ANALOG (1S,2S, 3R,4R)-4-AMINOCYCLOPENTANE-1,2,3-TRIOL
3DX2A:412-521GOLGI MANNOSIDASE II COMPLEX WITH MANNOSTATIN B
3DX3A:412-522GOLGI ALPHA-MANNOSIDASE II IN COMPLEX WITH MANNOSTATIN ANALOG (1R,2R, 3S,4R,5R)-5-AMINOCYCLOPENTANE-1,2,3,4-TETRAOL
3DX4A:412-522GOLGI ALPHA-MANNOSIDASE II IN COMPLEX WITH MANNOSTATIN ANALOG (1R,2R, 3R,4S,5R)-4-AMINO-5-METHOXYCYCLOPENTANE-1,2,3-TRIOL
3EJPA:412-522GOLGI ALPHA-MANNOSIDASE II IN COMPLEX WITH 5-SUBSTITUTED SWAINSONINE ANALOG: (5R)-5-[2'-OXO-2'-(PHENYL)ETHYL]-SWAINSONINE
3EJQA:412-522GOLGI ALPHA-MANNOSIDASE II IN COMPLEX WITH 5-SUBSTITUED SWAINSONINE ANALOG: (5R)-5-[2'-OXO-2'-(4-METHYLPHENYL)ETHYL]-SWAINSONINE
3EJRA:412-522GOLGI ALPHA-MANNOSIDASE II IN COMPLEX WITH 5-SUBSTITUED SWAINSONINE ANALOG: (5R)-5-[2'-OXO-2'-(4-TERT-BUTYLPHENYL)ETHYL]-SWAINSONINE
3EJSA:412-522GOLGI ALPHA-MANNOSIDASE II IN COMPLEX WITH 5-SUBSTITUTED SWAINSONINE ANALOG: (5S)-5-[2'-(4-TERT-BUTYLPHENYL)ETHYL]-SWAINSONINE
3EJTA:412-522GOLGI ALPHA-MANNOSIDASE II IN COMPLEX WITH 5-SUBSTITUTED SWAINSONINE ANALOG:(5R)-5-[2'-(4-TERT-BUTYLPHENYL)ETHYL]-SWAINSONINE
3EJUA:412-522GOLGI ALPHA-MANNOSIDASE II IN COMPLEX WITH 5-SUBSTITUTED SWAINSONINE ANALOG:(5S)-5-[2'-OXO-2'-(4-TERT-BUTYLPHENYL)ETHYL]-SWAINSONINE
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Homologous Superfamily: Shigella T3SS effector IpaH domain (1)
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301 (Shigella flexneri 2a str) (1)
3CKDA:284-364; B:285-363; C:283-364CRYSTAL STRUCTURE OF THE C-TERMINAL DOMAIN OF THE SHIGELLA TYPE III EFFECTOR IPAH
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Homologous Superfamily: Vng1086c-like domain (1)
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Nrc-1 (Halobacterium sp) (1)
2GF4A:2-89; B:2-75CRYSTAL STRUCTURE OF VNG1086C FROM HALOBACTERIUM SALINARIUM (HALOBACTERIUM HALOBIUM). NORTHEAST STRUCTURAL GENOMICS TARGET HSR14