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(-) Description

Title :  CRYSTAL STRUCTURE OF THE T. THERMOPHILUS DODECIN R45A MUTANT
 
Authors :  B. Meissner, L. -O. Essen
Date :  22 May 07  (Deposition) - 11 Sep 07  (Release) - 05 Jul 17  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.59
Chains :  Asym./Biol. Unit :  A,B,C,D,E,F,G,H,I,J,K,L
Keywords :  Flavoprotein, Flavin Binding Protein, Dodecins, Flavin Dimer, Putative Storage Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  B. Meissner, E. Schleicher, S. Weber, L. -O. Essen
The Dodecin From Thermus Thermophilus, A Bifunctional Cofactor Storage Protein.
J. Biol. Chem. V. 282 33142 2007
PubMed-ID: 17855371  |  Reference-DOI: 10.1074/JBC.M704951200

(-) Compounds

Molecule 1 - DODECIN
    Chains: A, B, C, D, E, F, G, H, I, J, K, L
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Strain: BL21(DE3)GOLD
    Expression System Taxid: 469008
    Expression System Vector: PET28A
    Expression System Vector Type: PLASMID
    Fragment: RESIDUES 2-69
    Mutation: YES
    Organism Scientific: THERMUS THERMOPHILUS
    Organism Taxid: 300852
    Strain: HB8
    Synonym: HYPOTHETICAL PROTEIN TTHA1431

 Structural Features

(-) Chains, Units

  123456789101112
Asymmetric/Biological Unit : ABCDEFGHIJKL

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (3, 27)

Asymmetric/Biological Unit (3, 27)
No.NameCountTypeFull Name
1CL5Ligand/IonCHLORIDE ION
2COA12Ligand/IonCOENZYME A
3FMN10Ligand/IonFLAVIN MONONUCLEOTIDE

(-) Sites  (27, 27)

Asymmetric Unit (27, 27)
No.NameEvidenceResiduesDescription
01AC1SOFTWARELYS A:3 , TYR A:5 , ASP A:37 , TRP A:38 , ARG A:65 , THR C:47 , GLN C:57 , FMN G:101 , VAL I:11 , GLN I:57 , VAL I:59BINDING SITE FOR RESIDUE FMN A 101
02AC2SOFTWAREARG A:28 , THR A:32 , ARG A:34 , HIS A:35 , PHE A:64 , ARG A:65 , GLU A:67 , LYS E:6 , VAL E:8 , ARG E:28 , LEU E:33 , LEU E:66 , COA E:201 , HIS G:35 , LYS I:6 , LEU I:66 , COA I:201BINDING SITE FOR RESIDUE COA A 201
03AC3SOFTWAREARG B:28 , THR B:32 , ARG B:34 , HIS B:35 , PHE B:64 , ARG B:65 , GLU B:67 , LYS F:6 , VAL F:8 , ARG F:28 , LEU F:66 , COA F:201 , LYS J:6 , LEU J:66 , COA J:201BINDING SITE FOR RESIDUE COA B 201
04AC4SOFTWARETYR C:5 , ASP C:37 , TRP C:38 , ARG C:65 , THR F:47 , GLN F:57 , FMN J:101 , GLN K:57BINDING SITE FOR RESIDUE FMN C 101
05AC5SOFTWAREARG C:28 , THR C:32 , ARG C:34 , HIS C:35 , ARG C:65 , GLU C:67 , LYS G:6 , VAL G:8 , ARG G:28 , ALA G:29 , LEU G:33 , PHE G:64 , LEU G:66 , COA G:201 , LYS K:6 , COA K:201BINDING SITE FOR RESIDUE COA C 201
06AC6SOFTWARELYS D:3 , TYR D:5 , ASP D:37 , TRP D:38 , ARG D:65 , ALA E:45 , THR E:47 , GLN E:57 , FMN I:101BINDING SITE FOR RESIDUE FMN D 101
07AC7SOFTWAREARG D:28 , THR D:32 , ARG D:34 , HIS D:35 , ARG D:65 , GLU D:67 , LYS H:6 , VAL H:8 , ARG H:28 , ALA H:29 , LEU H:33 , LEU H:66 , COA H:201 , LYS L:6 , LEU L:66 , COA L:201BINDING SITE FOR RESIDUE COA D 201
08AC8SOFTWAREGLN A:57 , ALA B:45 , THR B:47 , GLN B:57 , LYS E:3 , TYR E:5 , ASP E:37 , TRP E:38 , ARG E:65 , FMN F:101BINDING SITE FOR RESIDUE FMN E 101
09AC9SOFTWARELYS A:6 , LEU A:66 , COA A:201 , ARG E:28 , THR E:32 , ARG E:34 , HIS E:35 , PHE E:64 , ARG E:65 , GLU E:67 , LYS I:6 , VAL I:8 , ARG I:28 , LEU I:33 , LEU I:66 , COA I:201BINDING SITE FOR RESIDUE COA E 201
10BC1SOFTWARETHR A:47 , GLN A:57 , GLN B:57 , FMN E:101 , LYS F:3 , TYR F:5 , ASP F:37 , TRP F:38 , ARG F:65BINDING SITE FOR RESIDUE FMN F 101
11BC2SOFTWARELYS B:6 , LEU B:66 , COA B:201 , ARG F:28 , THR F:32 , ARG F:34 , HIS F:35 , PHE F:64 , ARG F:65 , GLU F:67 , LYS J:6 , VAL J:8 , ARG J:28 , ALA J:29 , LEU J:33 , LEU J:66 , COA J:201 , ARG K:65BINDING SITE FOR RESIDUE COA F 201
12BC3SOFTWAREFMN A:101 , GLN C:57 , LYS G:3 , TYR G:5 , ASP G:37 , TRP G:38 , ALA I:45 , THR I:47 , GLN I:57BINDING SITE FOR RESIDUE FMN G 101
13BC4SOFTWARELYS C:6 , LEU C:66 , COA C:201 , ARG G:28 , THR G:32 , ARG G:34 , PHE G:64 , ARG G:65 , GLU G:67 , LYS K:6 , VAL K:8 , ARG K:28 , LEU K:33 , LEU K:66 , COA K:201BINDING SITE FOR RESIDUE COA G 201
14BC5SOFTWAREHIS B:35 , ARG B:65 , LYS D:6 , LEU D:66 , COA D:201 , ARG H:28 , THR H:32 , LEU H:33 , ARG H:34 , HIS H:35 , PHE H:64 , ARG H:65 , GLU H:67 , LYS L:6 , VAL L:8 , ARG L:28 , LEU L:66 , COA L:201BINDING SITE FOR RESIDUE COA H 201
15BC6SOFTWAREFMN D:101 , GLN E:57 , LYS I:3 , TYR I:5 , ASP I:37 , TRP I:38 , ARG I:65 , THR L:47 , GLN L:57BINDING SITE FOR RESIDUE FMN I 101
16BC7SOFTWARELYS A:6 , VAL A:8 , ARG A:28 , LEU A:33 , LEU A:66 , COA A:201 , LYS E:6 , LEU E:66 , COA E:201 , ARG I:28 , THR I:32 , ARG I:34 , HIS I:35 , PHE I:64 , ARG I:65 , GLU I:67BINDING SITE FOR RESIDUE COA I 201
17BC8SOFTWAREFMN C:101 , GLN F:57 , LYS J:3 , TYR J:5 , ASP J:37 , TRP J:38 , ARG J:65 , THR K:47 , GLN K:57BINDING SITE FOR RESIDUE FMN J 101
18BC9SOFTWARELYS B:6 , VAL B:8 , ARG B:28 , LEU B:33 , LEU B:66 , COA B:201 , LYS F:6 , LEU F:66 , COA F:201 , ARG J:28 , THR J:32 , LEU J:33 , ARG J:34 , HIS J:35 , ARG J:65 , GLU J:67BINDING SITE FOR RESIDUE COA J 201
19CC1SOFTWARETHR H:47 , GLN H:57 , LYS K:3 , TYR K:5 , ASP K:37 , TRP K:38 , ARG K:65 , FMN L:101BINDING SITE FOR RESIDUE FMN K 101
20CC2SOFTWARELYS C:6 , VAL C:8 , ARG C:28 , ALA C:29 , LEU C:33 , LEU C:66 , COA C:201 , LYS G:6 , LEU G:66 , COA G:201 , ARG K:28 , THR K:32 , ARG K:34 , HIS K:35 , ARG K:65 , GLU K:67BINDING SITE FOR RESIDUE COA K 201
21CC3SOFTWAREALA G:45 , THR G:47 , GLN G:57 , GLN H:57 , FMN K:101 , LYS L:3 , TYR L:5 , ASP L:37 , TRP L:38 , ARG L:65BINDING SITE FOR RESIDUE FMN L 101
22CC4SOFTWARELYS D:6 , VAL D:8 , ARG D:28 , ALA D:29 , LEU D:33 , LEU D:66 , COA D:201 , LYS H:6 , LEU H:66 , COA H:201 , ARG L:28 , THR L:32 , ARG L:34 , HIS L:35 , ARG L:65 , GLU L:67BINDING SITE FOR RESIDUE COA L 201
23CC5SOFTWARELYS C:6 , LYS G:6 , LYS K:6BINDING SITE FOR RESIDUE CL C 1070
24CC6SOFTWARELYS B:6 , LYS F:6 , LYS J:6BINDING SITE FOR RESIDUE CL B 1070
25CC7SOFTWARELYS A:6 , LYS E:6 , LYS I:6BINDING SITE FOR RESIDUE CL A 1070
26CC8SOFTWARELYS D:6 , LYS H:6 , LYS L:6BINDING SITE FOR RESIDUE CL D 1070
27CC9SOFTWAREHIS F:35 , ARG F:65 , GLY K:2BINDING SITE FOR RESIDUE CL F 1070

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 2V19)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 2V19)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 2V19)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 2V19)

(-) Exons   (0, 0)

(no "Exon" information available for 2V19)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:67
 aligned with DODEC_THET8 | Q5SIE3 from UniProtKB/Swiss-Prot  Length:69

    Alignment length:67
                                    11        21        31        41        51        61       
           DODEC_THET8    2 GKVYKKVELVGTSEEGLEAAIQAALARARKTLRHLDWFEVKEIRGTIGEAGVKEYQVVLEVGFRLEE 68
               SCOP domains d2v19a1 A:2-68 Uncharacterized protein TTHA1431                     SCOP domains
               CATH domains 2v19A00 A:2-68 Flavin-binding protein dodecin                       CATH domains
               Pfam domains ------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeeeeeeee..hhhhhhhhhhhhhhhhh..eeeeeeeeeeeeee..eeeeeeeeeeeeee... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------- Transcript
                  2v19 A  2 GKVYKKVELVGTSEEGLEAAIQAALARARKTLRHLDWFEVKEIAGTIGEAGVKEYQVVLEVGFRLEE 68
                                    11        21        31        41        51        61       


Chain B from PDB  Type:PROTEIN  Length:68
 aligned with DODEC_THET8 | Q5SIE3 from UniProtKB/Swiss-Prot  Length:69

    Alignment length:68
                                    11        21        31        41        51        61        
           DODEC_THET8    2 GKVYKKVELVGTSEEGLEAAIQAALARARKTLRHLDWFEVKEIRGTIGEAGVKEYQVVLEVGFRLEET 69
               SCOP domains d2v19b_ B: automated matches                                         SCOP domains
               CATH domains 2v19B00 B:2-69 Flavin-binding protein dodecin                        CATH domains
               Pfam domains -------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeeeeeeee..hhhhhhhhhhhhhhh....eeeeeeeeeeeeee..eeeeeeeeeeeeee.... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------- Transcript
                  2v19 B  2 GKVYKKVELVGTSEEGLEAAIQAALARARKTLRHLDWFEVKEIAGTIGEAGVKEYQVVLEVGFRLEET 69
                                    11        21        31        41        51        61        


Chain C from PDB  Type:PROTEIN  Length:68
 aligned with DODEC_THET8 | Q5SIE3 from UniProtKB/Swiss-Prot  Length:69

    Alignment length:68
                                    11        21        31        41        51        61        
           DODEC_THET8    2 GKVYKKVELVGTSEEGLEAAIQAALARARKTLRHLDWFEVKEIRGTIGEAGVKEYQVVLEVGFRLEET 69
               SCOP domains d2v19c_ C: automated matches                                         SCOP domains
               CATH domains 2v19C00 C:2-69 Flavin-binding protein dodecin                        CATH domains
               Pfam domains -------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeeeeeeee..hhhhhhhhhhhhhhhhh..eeeeeeeeeeeeee..eeeeeeeeeeeeee.... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------- Transcript
                  2v19 C  2 GKVYKKVELVGTSEEGLEAAIQAALARARKTLRHLDWFEVKEIAGTIGEAGVKEYQVVLEVGFRLEET 69
                                    11        21        31        41        51        61        


Chain D from PDB  Type:PROTEIN  Length:67
 aligned with DODEC_THET8 | Q5SIE3 from UniProtKB/Swiss-Prot  Length:69

    Alignment length:67
                                    11        21        31        41        51        61       
           DODEC_THET8    2 GKVYKKVELVGTSEEGLEAAIQAALARARKTLRHLDWFEVKEIRGTIGEAGVKEYQVVLEVGFRLEE 68
               SCOP domains d2v19d_ D: automated matches                                        SCOP domains
               CATH domains 2v19D00 D:2-68 Flavin-binding protein dodecin                       CATH domains
               Pfam domains ------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeeeeeeee..hhhhhhhhhhhhhhhhh..eeeeeeeeeeeeee..eeeeeeeeeeeeee... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------- Transcript
                  2v19 D  2 GKVYKKVELVGTSEEGLEAAIQAALARARKTLRHLDWFEVKEIAGTIGEAGVKEYQVVLEVGFRLEE 68
                                    11        21        31        41        51        61       


Chain E from PDB  Type:PROTEIN  Length:67
 aligned with DODEC_THET8 | Q5SIE3 from UniProtKB/Swiss-Prot  Length:69

    Alignment length:67
                                    11        21        31        41        51        61       
           DODEC_THET8    2 GKVYKKVELVGTSEEGLEAAIQAALARARKTLRHLDWFEVKEIRGTIGEAGVKEYQVVLEVGFRLEE 68
               SCOP domains d2v19e_ E: automated matches                                        SCOP domains
               CATH domains 2v19E00 E:2-68 Flavin-binding protein dodecin                       CATH domains
               Pfam domains ------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeeeeeeee..hhhhhhhhhhhhhhhhh..eeeeeeeeeeeeee..eeeeeeeeeeeeee... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------- Transcript
                  2v19 E  2 GKVYKKVELVGTSEEGLEAAIQAALARARKTLRHLDWFEVKEIAGTIGEAGVKEYQVVLEVGFRLEE 68
                                    11        21        31        41        51        61       


Chain F from PDB  Type:PROTEIN  Length:67
 aligned with DODEC_THET8 | Q5SIE3 from UniProtKB/Swiss-Prot  Length:69

    Alignment length:67
                                    11        21        31        41        51        61       
           DODEC_THET8    2 GKVYKKVELVGTSEEGLEAAIQAALARARKTLRHLDWFEVKEIRGTIGEAGVKEYQVVLEVGFRLEE 68
               SCOP domains d2v19f_ F: automated matches                                        SCOP domains
               CATH domains 2v19F00 F:2-68 Flavin-binding protein dodecin                       CATH domains
               Pfam domains ------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeeeeeeee..hhhhhhhhhhhhhhhhh..eeeeeeeeeeeeee..eeeeeeeeeeeeee... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------- Transcript
                  2v19 F  2 GKVYKKVELVGTSEEGLEAAIQAALARARKTLRHLDWFEVKEIAGTIGEAGVKEYQVVLEVGFRLEE 68
                                    11        21        31        41        51        61       


Chain G from PDB  Type:PROTEIN  Length:68
 aligned with DODEC_THET8 | Q5SIE3 from UniProtKB/Swiss-Prot  Length:69

    Alignment length:68
                                    11        21        31        41        51        61        
           DODEC_THET8    2 GKVYKKVELVGTSEEGLEAAIQAALARARKTLRHLDWFEVKEIRGTIGEAGVKEYQVVLEVGFRLEET 69
               SCOP domains d2v19g_ G: automated matches                                         SCOP domains
               CATH domains 2v19G00 G:2-69 Flavin-binding protein dodecin                        CATH domains
               Pfam domains -------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeeeeeeee..hhhhhhhhhhhhhhhhh..eeeeeeeeeeeeee..eeeeeeeeeeeeee.... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------- Transcript
                  2v19 G  2 GKVYKKVELVGTSEEGLEAAIQAALARARKTLRHLDWFEVKEIAGTIGEAGVKEYQVVLEVGFRLEET 69
                                    11        21        31        41        51        61        


Chain H from PDB  Type:PROTEIN  Length:67
 aligned with DODEC_THET8 | Q5SIE3 from UniProtKB/Swiss-Prot  Length:69

    Alignment length:67
                                    11        21        31        41        51        61       
           DODEC_THET8    2 GKVYKKVELVGTSEEGLEAAIQAALARARKTLRHLDWFEVKEIRGTIGEAGVKEYQVVLEVGFRLEE 68
               SCOP domains d2v19h_ H: automated matches                                        SCOP domains
               CATH domains 2v19H00 H:2-68 Flavin-binding protein dodecin                       CATH domains
               Pfam domains ------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeeeeeeee..hhhhhhhhhhhhhhhhh..eeeeeeeeeeeeee..eeeeeeeeeeeeee... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------- Transcript
                  2v19 H  2 GKVYKKVELVGTSEEGLEAAIQAALARARKTLRHLDWFEVKEIAGTIGEAGVKEYQVVLEVGFRLEE 68
                                    11        21        31        41        51        61       


Chain I from PDB  Type:PROTEIN  Length:68
 aligned with DODEC_THET8 | Q5SIE3 from UniProtKB/Swiss-Prot  Length:69

    Alignment length:68
                                    11        21        31        41        51        61        
           DODEC_THET8    2 GKVYKKVELVGTSEEGLEAAIQAALARARKTLRHLDWFEVKEIRGTIGEAGVKEYQVVLEVGFRLEET 69
               SCOP domains d2v19i_ I: automated matches                                         SCOP domains
               CATH domains 2v19I00 I:2-69 Flavin-binding protein dodecin                        CATH domains
               Pfam domains -------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeeeeeeee..hhhhhhhhhhhhhhhhh..eeeeeeeeeeeeee..eeeeeeeeeeeeee.... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------- Transcript
                  2v19 I  2 GKVYKKVELVGTSEEGLEAAIQAALARARKTLRHLDWFEVKEIAGTIGEAGVKEYQVVLEVGFRLEET 69
                                    11        21        31        41        51        61        


Chain J from PDB  Type:PROTEIN  Length:67
 aligned with DODEC_THET8 | Q5SIE3 from UniProtKB/Swiss-Prot  Length:69

    Alignment length:67
                                    11        21        31        41        51        61       
           DODEC_THET8    2 GKVYKKVELVGTSEEGLEAAIQAALARARKTLRHLDWFEVKEIRGTIGEAGVKEYQVVLEVGFRLEE 68
               SCOP domains d2v19j_ J: automated matches                                        SCOP domains
               CATH domains 2v19J00 J:2-68 Flavin-binding protein dodecin                       CATH domains
               Pfam domains ------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeeeeeeee..hhhhhhhhhhhhhhhhh..eeeeeeeeeeeeee..eeeeeeeeeeeeee... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------- Transcript
                  2v19 J  2 GKVYKKVELVGTSEEGLEAAIQAALARARKTLRHLDWFEVKEIAGTIGEAGVKEYQVVLEVGFRLEE 68
                                    11        21        31        41        51        61       


Chain K from PDB  Type:PROTEIN  Length:68
 aligned with DODEC_THET8 | Q5SIE3 from UniProtKB/Swiss-Prot  Length:69

    Alignment length:68
                                    11        21        31        41        51        61        
           DODEC_THET8    2 GKVYKKVELVGTSEEGLEAAIQAALARARKTLRHLDWFEVKEIRGTIGEAGVKEYQVVLEVGFRLEET 69
               SCOP domains d2v19k_ K: automated matches                                         SCOP domains
               CATH domains 2v19K00 K:2-69 Flavin-binding protein dodecin                        CATH domains
               Pfam domains -------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeeeeeeee..hhhhhhhhhhhhhhhhh..eeeeeeeeeeeeee..eeeeeeeeeeeeee.... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------- Transcript
                  2v19 K  2 GKVYKKVELVGTSEEGLEAAIQAALARARKTLRHLDWFEVKEIAGTIGEAGVKEYQVVLEVGFRLEET 69
                                    11        21        31        41        51        61        


Chain L from PDB  Type:PROTEIN  Length:68
 aligned with DODEC_THET8 | Q5SIE3 from UniProtKB/Swiss-Prot  Length:69

    Alignment length:68
                                    11        21        31        41        51        61        
           DODEC_THET8    2 GKVYKKVELVGTSEEGLEAAIQAALARARKTLRHLDWFEVKEIRGTIGEAGVKEYQVVLEVGFRLEET 69
               SCOP domains d2v19l_ L: automated matches                                         SCOP domains
               CATH domains 2v19L00 L:2-69 Flavin-binding protein dodecin                        CATH domains
               Pfam domains -------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeeeeeeee..hhhhhhhhhhhhhhhhh..eeeeeeeeeeeeee..eeeeeeeeeeeeee.... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------- Transcript
                  2v19 L  2 GKVYKKVELVGTSEEGLEAAIQAALARARKTLRHLDWFEVKEIAGTIGEAGVKEYQVVLEVGFRLEET 69
                                    11        21        31        41        51        61
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (2, 12)

Asymmetric/Biological Unit
(-)
Class: Alpha and beta proteins (a+b) (23004)

(-) CATH Domains  (1, 12)

Asymmetric/Biological Unit
(-)
Class: Alpha Beta (26913)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 2V19)

(-) Gene Ontology  (1, 1)

Asymmetric/Biological Unit(hide GO term definitions)
Chain A,B,C,D,E,F,G,H,I,J,K,L   (DODEC_THET8 | Q5SIE3)
molecular function
    GO:0000166    nucleotide binding    Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.

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        DODEC_THET8 | Q5SIE3: 2cz8 2deg 2ux9 2v18 2v21 2vyx

(-) Related Entries Specified in the PDB File

2ux9 CRYSTAL STRUCTURE OF THE T. THERMOPHILUS DODECIN R65A MUTANT
2v18 CRYSTAL STRUCTURE OF THE T. THERMOPHILUS DODECIN
2v21 CRYSTAL STRUCTURE OF THE T. THERMOPHILUS DODECIN IN COMPLEX WITH PREBOUND FMN