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(-) Description

Title :  CRYSTAL STRUCTURE AT 2.9 ANGSTROMS RESOLUTION OF HUMAN PLASMA COAGULATION FACTOR XI ZYMOGEN
 
Authors :  E. Papagrigoriou, P. A. Mcewan, P. N. Walsh, J. Emsley
Date :  01 Dec 05  (Deposition) - 16 May 06  (Release) - 13 Jul 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.87
Chains :  Asym. Unit :  A
Biol. Unit 1:  A  (2x)
Keywords :  Protease, Apple Domain, Hydrolase (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  E. Papagrigoriou, P. A. Mcewan, P. N. Walsh, J. Emsley
Crystal Structure Of The Factor Xi Zymogen Reveals A Pathwa For Transactivation.
Nat. Struct. Mol. Biol. V. 13 557 2006
PubMed-ID: 16699514  |  Reference-DOI: 10.1038/NSMB1095

(-) Compounds

Molecule 1 - COAGULATION FACTOR XI
    ChainsA
    EC Number3.4.21.27
    Organism CommonHUMAN
    Organism ScientificHOMO SAPIENS
    Organism Taxid9606
    SynonymPLASMA THROMBOPLASTIN ANTECEDENT, PTA, FXI

 Structural Features

(-) Chains, Units

  1
Asymmetric Unit A
Biological Unit 1 (2x)A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 6)

Asymmetric Unit (2, 6)
No.NameCountTypeFull Name
1NAG4Ligand/IonN-ACETYL-D-GLUCOSAMINE
2PT2Ligand/IonPLATINUM (II) ION
Biological Unit 1 (1, 8)
No.NameCountTypeFull Name
1NAG8Ligand/IonN-ACETYL-D-GLUCOSAMINE
2PT-1Ligand/IonPLATINUM (II) ION

(-) Sites  (4, 4)

Asymmetric Unit (4, 4)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREASN A:72BINDING SITE FOR RESIDUE NAG A 901
2AC2SOFTWAREASN A:108 , NAG A:911BINDING SITE FOR RESIDUE NAG A 910
3AC3SOFTWARENAG A:910BINDING SITE FOR RESIDUE NAG A 911
4AC4SOFTWAREASN A:432 , THR A:513BINDING SITE FOR RESIDUE NAG A 920

(-) SS Bonds  (17, 17)

Asymmetric Unit
No.Residues
1A:2 -A:85
2A:28 -A:58
3A:32 -A:38
4A:92 -A:175
5A:118 -A:147
6A:122 -A:128
7A:182 -A:265
8A:208 -A:237
9A:212 -A:218
10A:273 -A:356
11A:299 -A:328
12A:303 -A:309
13A:321 -A:321
14A:362 -A:482
15A:398 -A:414
16A:496 -A:563
17A:527 -A:542

(-) Cis Peptide Bonds  (2, 2)

Asymmetric Unit
No.Residues
1His A:215 -Pro A:216
2Ser A:391 -Pro A:392

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (61, 61)

Asymmetric Unit (61, 61)
  dbSNPPDB
No.SourceVariant IDVariantUniProt IDStatusIDChainVariant
01UniProtVAR_076515F30SFA11_HUMANDisease (FA11D)  ---AF12S
02UniProtVAR_067929G32RFA11_HUMANDisease (FA11D)281875259AG14R
03UniProtVAR_012085D34HFA11_HUMANDisease (FA11D)281875267AD16H
04UniProtVAR_067930A43TFA11_HUMANDisease (FA11D)281875264AA25T
05UniProtVAR_054894C46FFA11_HUMANDisease (FA11D)281875271AC28F
06UniProtVAR_067931T51IFA11_HUMANDisease (FA11D)281875252AT33I
07UniProtVAR_067932T51PFA11_HUMANDisease (FA11D)281875243AT33P
08UniProtVAR_067933H53QFA11_HUMANDisease (FA11D)281875261AH35Q
09UniProtVAR_054895C56RFA11_HUMANDisease (FA11D)121965069AC38R
10UniProtVAR_067934A63VFA11_HUMANDisease (FA11D)281875244AA45V
11UniProtVAR_011774P66LFA11_HUMANPolymorphism5968AP48L
12UniProtVAR_054896K101RFA11_HUMANDisease (FA11D)281875272AK83R
13UniProtVAR_076516A109TFA11_HUMANDisease (FA11D)768474112AA91T
14UniProtVAR_067935C140YFA11_HUMANDisease (FA11D)281875256AC122Y
15UniProtVAR_054897Y151CFA11_HUMANDisease (FA11D)281875273AY133C
16UniProtVAR_076517D216NFA11_HUMANDisease (FA11D)  ---AD198N
17UniProtVAR_067936D222YFA11_HUMANDisease (FA11D)281875245AD204Y
18UniProtVAR_067937R228QFA11_HUMANDisease (FA11D)281875246AR210Q
19UniProtVAR_067938F241LFA11_HUMANDisease (FA11D)281875265AF223L
20UniProtVAR_011775Q244RFA11_HUMANPolymorphism5969AQ226R
21UniProtVAR_012086W246CFA11_HUMANDisease (FA11D)281875279AW228C
22UniProtVAR_067939R252TFA11_HUMANDisease (FA11D)281875260AR234T
23UniProtVAR_054898C255YFA11_HUMANDisease (FA11D)281875277AC237Y
24UniProtVAR_054899G263EFA11_HUMANDisease (FA11D)281875274AG245E
25UniProtVAR_012087S266NFA11_HUMANDisease (FA11D)145168351AS248N
26UniProtVAR_054900K270IFA11_HUMANDisease (FA11D)121965070AK252I
27UniProtVAR_067940S276CFA11_HUMANDisease (FA11D)281875247AS258C
28UniProtVAR_067941G277DFA11_HUMANDisease (FA11D)281875248AG259D
29UniProtVAR_006622F301LFA11_HUMANDisease (FA11D)121965064AF283L
30UniProtVAR_011776I308FFA11_HUMANPolymorphism5972AI290F
31UniProtVAR_067942E315KFA11_HUMANDisease (FA11D)281875257AE297K
32UniProtVAR_012088L320PFA11_HUMANDisease (FA11D)281875268AL302P
33UniProtVAR_012089T322IFA11_HUMANDisease (FA11D)281875269AT304I
34UniProtVAR_012090R326CFA11_HUMANDisease (FA11D)28934608AR308C
35UniProtVAR_067943T331IFA11_HUMANDisease (FA11D)281875253AT313I
36UniProtVAR_011777C339FFA11_HUMANPolymorphism5967AC321F
37UniProtVAR_012091E341KFA11_HUMANDisease (FA11D)281875270AE323K
38UniProtVAR_067944L360PFA11_HUMANDisease (FA11D)281875254AL342P
39UniProtVAR_011778W399RFA11_HUMANPolymorphism1800439AW381R
40UniProtVAR_067945W401RFA11_HUMANDisease (FA11D)281875262AW383R
41UniProtVAR_067946V403MFA11_HUMANDisease (FA11D)281875266AV385M
42UniProtVAR_012092T404NFA11_HUMANDisease (FA11D)121965067AT386N
43UniProtVAR_054901G418VFA11_HUMANDisease (FA11D)121965071AG400V
44UniProtVAR_012093A430VFA11_HUMANDisease (FA11D)121965068AA412V
45UniProtVAR_067947I454KFA11_HUMANDisease (FA11D)281875241AI436K
46UniProtVAR_012094F460VFA11_HUMANDisease (FA11D)121965065AF442V
47UniProtVAR_067948I481SFA11_HUMANDisease (FA11D)281875242AI463S
48UniProtVAR_012095T493IFA11_HUMANDisease (FA11D)  ---AT475I
49UniProtVAR_067949S503PFA11_HUMANDisease (FA11D)140068026AS485P
50UniProtVAR_067950D506GFA11_HUMANDisease (FA11D)281875258AD488G
51UniProtVAR_054902Y511HFA11_HUMANDisease (FA11D)281875278AY493H
52UniProtVAR_067951C514FFA11_HUMANDisease (FA11D)281875249AC496F
53UniProtVAR_054903P538LFA11_HUMANDisease (FA11D)139695003AP520L
54UniProtVAR_076518E543KFA11_HUMANDisease (FA11D)142952627AE525K
55UniProtVAR_076519H552RFA11_HUMANDisease (FA11D)369935706AH534R
56UniProtVAR_067953S575LFA11_HUMANDisease (FA11D)281875250AS557L
57UniProtVAR_054905W587SFA11_HUMANDisease (FA11D)121965072AW569S
58UniProtVAR_012096S594RFA11_HUMANDisease (FA11D)28934609AS576R
59UniProtVAR_067954E597KFA11_HUMANDisease (FA11D)281875251AE579K
60UniProtVAR_067955Y608HFA11_HUMANDisease (FA11D)281875255AY590H
61UniProtVAR_054906I618SFA11_HUMANDisease (FA11D)281875276AI600S

  SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)
Biological Unit 1 (61, 122)
  dbSNPPDB
No.SourceVariant IDVariantUniProt IDStatusIDChainVariant
01UniProtVAR_076515F30SFA11_HUMANDisease (FA11D)  ---AF12S
02UniProtVAR_067929G32RFA11_HUMANDisease (FA11D)281875259AG14R
03UniProtVAR_012085D34HFA11_HUMANDisease (FA11D)281875267AD16H
04UniProtVAR_067930A43TFA11_HUMANDisease (FA11D)281875264AA25T
05UniProtVAR_054894C46FFA11_HUMANDisease (FA11D)281875271AC28F
06UniProtVAR_067931T51IFA11_HUMANDisease (FA11D)281875252AT33I
07UniProtVAR_067932T51PFA11_HUMANDisease (FA11D)281875243AT33P
08UniProtVAR_067933H53QFA11_HUMANDisease (FA11D)281875261AH35Q
09UniProtVAR_054895C56RFA11_HUMANDisease (FA11D)121965069AC38R
10UniProtVAR_067934A63VFA11_HUMANDisease (FA11D)281875244AA45V
11UniProtVAR_011774P66LFA11_HUMANPolymorphism5968AP48L
12UniProtVAR_054896K101RFA11_HUMANDisease (FA11D)281875272AK83R
13UniProtVAR_076516A109TFA11_HUMANDisease (FA11D)768474112AA91T
14UniProtVAR_067935C140YFA11_HUMANDisease (FA11D)281875256AC122Y
15UniProtVAR_054897Y151CFA11_HUMANDisease (FA11D)281875273AY133C
16UniProtVAR_076517D216NFA11_HUMANDisease (FA11D)  ---AD198N
17UniProtVAR_067936D222YFA11_HUMANDisease (FA11D)281875245AD204Y
18UniProtVAR_067937R228QFA11_HUMANDisease (FA11D)281875246AR210Q
19UniProtVAR_067938F241LFA11_HUMANDisease (FA11D)281875265AF223L
20UniProtVAR_011775Q244RFA11_HUMANPolymorphism5969AQ226R
21UniProtVAR_012086W246CFA11_HUMANDisease (FA11D)281875279AW228C
22UniProtVAR_067939R252TFA11_HUMANDisease (FA11D)281875260AR234T
23UniProtVAR_054898C255YFA11_HUMANDisease (FA11D)281875277AC237Y
24UniProtVAR_054899G263EFA11_HUMANDisease (FA11D)281875274AG245E
25UniProtVAR_012087S266NFA11_HUMANDisease (FA11D)145168351AS248N
26UniProtVAR_054900K270IFA11_HUMANDisease (FA11D)121965070AK252I
27UniProtVAR_067940S276CFA11_HUMANDisease (FA11D)281875247AS258C
28UniProtVAR_067941G277DFA11_HUMANDisease (FA11D)281875248AG259D
29UniProtVAR_006622F301LFA11_HUMANDisease (FA11D)121965064AF283L
30UniProtVAR_011776I308FFA11_HUMANPolymorphism5972AI290F
31UniProtVAR_067942E315KFA11_HUMANDisease (FA11D)281875257AE297K
32UniProtVAR_012088L320PFA11_HUMANDisease (FA11D)281875268AL302P
33UniProtVAR_012089T322IFA11_HUMANDisease (FA11D)281875269AT304I
34UniProtVAR_012090R326CFA11_HUMANDisease (FA11D)28934608AR308C
35UniProtVAR_067943T331IFA11_HUMANDisease (FA11D)281875253AT313I
36UniProtVAR_011777C339FFA11_HUMANPolymorphism5967AC321F
37UniProtVAR_012091E341KFA11_HUMANDisease (FA11D)281875270AE323K
38UniProtVAR_067944L360PFA11_HUMANDisease (FA11D)281875254AL342P
39UniProtVAR_011778W399RFA11_HUMANPolymorphism1800439AW381R
40UniProtVAR_067945W401RFA11_HUMANDisease (FA11D)281875262AW383R
41UniProtVAR_067946V403MFA11_HUMANDisease (FA11D)281875266AV385M
42UniProtVAR_012092T404NFA11_HUMANDisease (FA11D)121965067AT386N
43UniProtVAR_054901G418VFA11_HUMANDisease (FA11D)121965071AG400V
44UniProtVAR_012093A430VFA11_HUMANDisease (FA11D)121965068AA412V
45UniProtVAR_067947I454KFA11_HUMANDisease (FA11D)281875241AI436K
46UniProtVAR_012094F460VFA11_HUMANDisease (FA11D)121965065AF442V
47UniProtVAR_067948I481SFA11_HUMANDisease (FA11D)281875242AI463S
48UniProtVAR_012095T493IFA11_HUMANDisease (FA11D)  ---AT475I
49UniProtVAR_067949S503PFA11_HUMANDisease (FA11D)140068026AS485P
50UniProtVAR_067950D506GFA11_HUMANDisease (FA11D)281875258AD488G
51UniProtVAR_054902Y511HFA11_HUMANDisease (FA11D)281875278AY493H
52UniProtVAR_067951C514FFA11_HUMANDisease (FA11D)281875249AC496F
53UniProtVAR_054903P538LFA11_HUMANDisease (FA11D)139695003AP520L
54UniProtVAR_076518E543KFA11_HUMANDisease (FA11D)142952627AE525K
55UniProtVAR_076519H552RFA11_HUMANDisease (FA11D)369935706AH534R
56UniProtVAR_067953S575LFA11_HUMANDisease (FA11D)281875250AS557L
57UniProtVAR_054905W587SFA11_HUMANDisease (FA11D)121965072AW569S
58UniProtVAR_012096S594RFA11_HUMANDisease (FA11D)28934609AS576R
59UniProtVAR_067954E597KFA11_HUMANDisease (FA11D)281875251AE579K
60UniProtVAR_067955Y608HFA11_HUMANDisease (FA11D)281875255AY590H
61UniProtVAR_054906I618SFA11_HUMANDisease (FA11D)281875276AI600S

  SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)

(-) PROSITE Motifs  (5, 7)

Asymmetric Unit (5, 7)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1APPLEPS00495 Apple domain.FA11_HUMAN20-103
110-193
200-283
291-374
  4A:2-85
A:92-175
A:182-265
A:273-356
2PANPS50948 PAN/Apple domain profile.FA11_HUMAN20-103
110-193
200-283
291-374
  4A:2-85
A:92-175
A:182-265
A:273-356
3TRYPSIN_DOMPS50240 Serine proteases, trypsin domain profile.FA11_HUMAN388-623  1A:370-604
4TRYPSIN_HISPS00134 Serine proteases, trypsin family, histidine active site.FA11_HUMAN427-432  1A:409-414
5TRYPSIN_SERPS00135 Serine proteases, trypsin family, serine active site.FA11_HUMAN569-580  1A:554-562
Biological Unit 1 (5, 22)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1APPLEPS00495 Apple domain.FA11_HUMAN20-103
110-193
200-283
291-374
  8A:2-85
A:92-175
A:182-265
A:273-356
2PANPS50948 PAN/Apple domain profile.FA11_HUMAN20-103
110-193
200-283
291-374
  8A:2-85
A:92-175
A:182-265
A:273-356
3TRYPSIN_DOMPS50240 Serine proteases, trypsin domain profile.FA11_HUMAN388-623  2A:370-604
4TRYPSIN_HISPS00134 Serine proteases, trypsin family, histidine active site.FA11_HUMAN427-432  2A:409-414
5TRYPSIN_SERPS00135 Serine proteases, trypsin family, serine active site.FA11_HUMAN569-580  2A:554-562

(-) Exons   (0, 0)

(no "Exon" information available for 2F83)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it)
Chain A from PDB  Type:PROTEIN  Length:583
 aligned with FA11_HUMAN | P03951 from UniProtKB/Swiss-Prot  Length:625

    Alignment length:603
                                    29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269       279       289       299       309       319       329       339       349       359       369       379       389       399       409       419       429       439       449       459       469       479       489       499       509       519       529       539       549       559       569       579       589       599       609       619   
           FA11_HUMAN    20 CVTQLLKDTCFEGGDITTVFTPSAKYCQVVCTYHPRCLLFTFTAESPSEDPTRWFTCVLKDSVTETLPRVNRTAAISGYSFKQCSHQISACNKDIYVDLDMKGINYNSSVAKSAQECQERCTDDVHCHFFTYATRQFPSLEHRNICLLKHTQTGTPTRITKLDKVVSGFSLKSCALSNLACIRDIFPNTVFADSNIDSVMAPDAFVCGRICTHHPGCLFFTFFSQEWPKESQRNLCLLKTSESGLPSTRIKKSKALSGFSLQSCRHSIPVFCHSSFYHDTDFLGEELDIVAAKSHEACQKLCTNAVRCQFFTYTPAQASCNEGKGKCYLKLSSNGSPTKILHGRGGISGYTLRLCKMDNECTTKIKPRIVGGTASVRGEWPWQVTLHTTSPTQRHLCGGSIIGNQWILTAAHCFYGVESPKILRVYSGILNQSEIKEDTSFFGVQEIIIHDQYKMAESGYDIALLKLETTVNYTDSQRPICLPSKGDRNVIYTDCWVTGWGYRKLRDKIQNTLQKAKIPLVTNEECQKRYRGHKITHKMICAGYREGGKDACKGDSGGPLSCKHNEVWHLVGITSWGEGCAQRERPGVYTNVVEYVDWILEKT 622
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....eeeeee...eeeeee..hhhhhhhhhhhh....eeeee............eeeee.hhhhh..eeeeeeeeeee................eeeeeee.eeeeeee..hhhhhhhhhhh.....eeeee...........eeeeee.......eeeeeeeeeeee................eeeee...eeeeeee..hhhhhhhhhhh.....eeeee.....hhhhh.eeeeee.........eeeeeeeeee.hhhhh...........ee..ee..eeeeeeee...hhhhhhhhhh....eeeee..........eeeeeee.......ee......eeee...hhhhh........................eeeeee.....eeeeeeee....eeeehhhhhh...hhh.eeeee...hhhhh......eeeeeeee.............eeeee................hhhhh......eee....------.........ee...hhhhhhh..............----------......eeeeee..eeeeeeeeee...----....eeee...hhhhhhhh. Sec.struct. author
             SAPs(SNPs) (1) ----------S-R-H--------T--F----I-Q--R------V--L----------------------------------R-------T------------------------------Y----------C----------------------------------------------------------------N-----Y-----Q------------L--R-C-----T--Y-------E--N---I-----CD-----------------------L------F------K----P-I---C----I-------F-K------------------P--------------------------------------R-R-MN-------------V-----------V-----------------------K-----V--------------------S-----------I---------P--G----H--F-----------------------L----K--------R----------------------L-----------S------R--K----------H---------S---- SAPs(SNPs) (1)
             SAPs(SNPs) (2) -------------------------------P------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs) (2)
                PROSITE (1) PAN  PDB: A:2-85 UniProt: 20-103                                                    ------PAN  PDB: A:92-175 UniProt: 110-193                                                 ------PAN  PDB: A:182-265 UniProt: 200-283                                                -------PAN  PDB: A:273-356 UniProt: 291-374                                                -------------TRYPSIN_DOM  PDB: A:370-604 UniProt: 388-623                                                                                                                                                                                                PROSITE (1)
                PROSITE (2) APPLE  PDB: A:2-85 UniProt: 20-103                                                  ------APPLE  PDB: A:92-175 UniProt: 110-193                                               ------APPLE  PDB: A:182-265 UniProt: 200-283                                              -------APPLE  PDB: A:273-356 UniProt: 291-374                                              ----------------------------------------------------TRYPSI----------------------------------------------------------------------------------------------------------------------------------------TRYPSIN_SER ------------------------------------------ PROSITE (2)
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2f83 A   2 CVTQLLKDTCFEGGDITTVFTPSAKYCQVVCTYHPRCLLFTFTAESPSEDPTRWFTCVLKDSVTETLPRVNRTAAISGYSFKQCSHQISACNKDIYVDLDMKGINYNSSVAKSAQECQERCTDDVHCHFFTYATRQFPSLEHRNICLLKHTQTGTPTRITKLDKVVSGFSLKSCALSNLACIRDIFPNTVFADSNIDSVMAPDAFVCGRICTHHPGCLFFTFFSQEWPKESQRNLCLLKTSESGLPSTRIKKSKALSGFSLQSCRHSIPVFCHSSFYHDTDFLGEELDIVAAKSHEACQKLCTNAVRCQFFTYTPAQASCNEGKGKCYLKLSSNGSPTKILHGRGGISGYTLRLCKMDNECTTKIKPRIVGGTASVRGEWPWQVTLHTTSPTQRHLCGGSIIGNQWILTAAHCFYGVESPKILRVYSGILNQSEIKEDTSFFGVQEIIIHDQYKMAESGYDIALLKLETTVNYTDSQRPICLPSKGDRNVIYTDCWVTGWG------KIQNTLQKAKIPLVTNEECQKRYRGHKITHKMICA----------KGDSGGPLSCKHNEVWHLVGITSWGEG----ERPGVYTNVVEYVDWILEKT 604
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451       461       471       481       491       501|      511       521       531       541 |       -  |    561       571        |-   |   591       601   
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              502    509                               543        554                       580  585                   

   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 2F83)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 2F83)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 2F83)

(-) Gene Ontology  (19, 19)

Asymmetric Unit(hide GO term definitions)
Chain A   (FA11_HUMAN | P03951)
molecular function
    GO:0008201    heparin binding    Interacting selectively and non-covalently with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha-(1->4)-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues.
    GO:0016787    hydrolase activity    Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3.
    GO:0008233    peptidase activity    Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid.
    GO:0005515    protein binding    Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
    GO:0070009    serine-type aminopeptidase activity    Catalysis of the hydrolysis of a peptide bond not more than three residues from the N-terminus of a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine).
    GO:0004252    serine-type endopeptidase activity    Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine).
    GO:0008236    serine-type peptidase activity    Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine).
biological process
    GO:0007596    blood coagulation    The sequential process in which the multiple coagulation factors of the blood interact, ultimately resulting in the formation of an insoluble fibrin clot; it may be divided into three stages: stage 1, the formation of intrinsic and extrinsic prothrombin converting principle; stage 2, the formation of thrombin; stage 3, the formation of stable fibrin polymers.
    GO:0007597    blood coagulation, intrinsic pathway    A protein activation cascade that contributes to blood coagulation and consists of the interactions among high molecular weight kininogen, prekallikrein, and factor XII that lead to the activation of clotting factor X.
    GO:0007599    hemostasis    The stopping of bleeding (loss of body fluid) or the arrest of the circulation to an organ or part.
    GO:0031639    plasminogen activation    The process in which inactive plasminogen is processed to active plasmin. This process includes cleavage at an internal Arg-Val site to form an N-terminal A-chain and C-terminal B-chain held together by a disulfide bond, and can include further proteolytic cleavage events to remove the preactivation peptide.
    GO:0051919    positive regulation of fibrinolysis    Any process that activates, maintains or increases the frequency, rate or extent of fibrinolysis, an ongoing process that solubilizes fibrin, resulting in the removal of small blood clots.
    GO:0006508    proteolysis    The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds.
    GO:0030193    regulation of blood coagulation    Any process that modulates the frequency, rate or extent of blood coagulation.
cellular component
    GO:0070062    extracellular exosome    A vesicle that is released into the extracellular region by fusion of the limiting endosomal membrane of a multivesicular body with the plasma membrane. Extracellular exosomes, also simply called exosomes, have a diameter of about 40-100 nm.
    GO:0005576    extracellular region    The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite.
    GO:0005615    extracellular space    That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid.
    GO:0016020    membrane    A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
    GO:0005886    plasma membrane    The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        FA11_HUMAN | P039511xx9 1xxd 1xxf 1zhm 1zhp 1zhr 1zjd 1zlr 1zmj 1zml 1zmn 1zom 1zpb 1zpc 1zpz 1zrk 1zsj 1zsk 1zsl 1ztj 1ztk 1ztl 2fda 2j8j 2j8l 3bg8 3sor 3sos 4cr5 4cr9 4cra 4crb 4crc 4crd 4cre 4crf 4crg 4d76 4d7f 4d7g 4na7 4na8 4ty6 4ty7 4wxi 4x6m 4x6n 4x6o 4x6p 4y8x 4y8y 4y8z 5e2o 5e2p 5eod 5eok 5exl 5exm 5exn 5i25 5q0d 5q0e 5q0f 5q0g 5q0h 5tks 5tkt 5tku

(-) Related Entries Specified in the PDB File

(no "Related Entries Specified in the PDB File" available for 2F83)