Chain A from PDB Type:PROTEIN Length:186
aligned with QACR_STAAU | P0A0N4 from UniProtKB/Swiss-Prot Length:188
Alignment length:186
11 21 31 41 51 61 71 81 91 101 111 121 131 141 151 161 171 181
QACR_STAAU 2 NLKDKILGVAKELFIKNGYNATTTGEIVKLSESSKGNLYYHFKTKENLFLEILNIEESKWQEQWKKEQIKCKTNREKFYLYNELSLTTEYYYPLQNAIIEFYTEYYKTNSINEKMNKLENKYIDAYHVIFKEGNLNGEWCINDVNAVSKIAANAVNGIVTFTHEQNINERIKLMNKFSQIFLNGLS 187
SCOP domains d2dtza1 A:2-72 Multidrug binding protein QacR d2dtza2 A:73-187 Multidrug binding protein QacR SCOP domains
CATH domains 2dtzA01 A:2-50 Homeodomain-like 2dtzA02 A:51-187 Tetracycline Repressor, domain 2 CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
Sec.struct. author hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhh..hhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhh.. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
PROSITE -----------------HTH_TETR_1 PDB: A:19-49 ------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
2dtz A 2 NLKDKILGVAKELFIKNGYNATTTGEIVKLSESSKGNLYYHFKTKENLFLEILNIEESKWQEQWKKEQIKAKTNREKFYLYNELSLTTEYYYPLQNAIIEFYTEYYKTNSINEKMNKLENKYIDAYHVIFKEGNLNGEWSINDVNAVSKIAANAVNGIVTFTHEQNINERIKLMNKFSQIFLNGLS 187
11 21 31 41 51 61 71 81 91 101 111 121 131 141 151 161 171 181
Chain B from PDB Type:PROTEIN Length:182
aligned with QACR_STAAU | P0A0N4 from UniProtKB/Swiss-Prot Length:188
Alignment length:186
11 21 31 41 51 61 71 81 91 101 111 121 131 141 151 161 171 181
QACR_STAAU 2 NLKDKILGVAKELFIKNGYNATTTGEIVKLSESSKGNLYYHFKTKENLFLEILNIEESKWQEQWKKEQIKCKTNREKFYLYNELSLTTEYYYPLQNAIIEFYTEYYKTNSINEKMNKLENKYIDAYHVIFKEGNLNGEWCINDVNAVSKIAANAVNGIVTFTHEQNINERIKLMNKFSQIFLNGLS 187
SCOP domains d2dtzb1 B:2-72 Multidrug binding prote in QacR d2dtzb2 B:73-187 Multidrug bindin g protein QacR SCOP domains
CATH domains 2dtzB01 B:2-50 Homeodomain-like 2dtzB02 B:51-187 Tetracycline Repressor, domain 2 CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
Sec.struct. author .hhhhhhhhhhhhhhhh.....hhhhhhhh........---..hhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhh..hhhhhhhhhhhhh.-.........hhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhh. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
PROSITE -----------------HTH_TETR_1 PDB: B:19-49 ------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
2dtz B 2 NLKDKILGVAKELFIKNGYNATTTGEIVKLSESSKGNL---FKTKENLFLEILNIEESKWQEQWKKEQIKAKTNREKFYLYNELSLTTEYYYPLQNAIIEFYTE-YKTNSINEKMNKLENKYIDAYHVIFKEGNLNGEWSINDVNAVSKIAANAVNGIVTFTHEQNINERIKLMNKFSQIFLNGLS 187
11 21 31 | - | 51 61 71 81 91 101 | | 111 121 131 141 151 161 171 181
39 43 105 |
107
Chain D from PDB Type:PROTEIN Length:184
aligned with QACR_STAAU | P0A0N4 from UniProtKB/Swiss-Prot Length:188
Alignment length:186
11 21 31 41 51 61 71 81 91 101 111 121 131 141 151 161 171 181
QACR_STAAU 2 NLKDKILGVAKELFIKNGYNATTTGEIVKLSESSKGNLYYHFKTKENLFLEILNIEESKWQEQWKKEQIKCKTNREKFYLYNELSLTTEYYYPLQNAIIEFYTEYYKTNSINEKMNKLENKYIDAYHVIFKEGNLNGEWCINDVNAVSKIAANAVNGIVTFTHEQNINERIKLMNKFSQIFLNGLS 187
SCOP domains d2dtzd1 D:2-72 Multidrug binding protein QacR d2dtzd2 D:73-187 Multidrug binding protein QacR SCOP domains
CATH domains 2dtzD01 D:2-50 Homeodomain-like 2dtzD02 D:51-187 Tetracycline Repressor, domain 2 CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
Sec.struct. author .hhhhhhhhhhhhhhhh.....hhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhh..hhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhh.--.hhhhhhhhhhhhhhhhhhhhh Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
PROSITE -----------------HTH_TETR_1 PDB: D:19-49 ------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
2dtz D 2 NLKDKILGVAKELFIKNGYNATTTGEIVKLSESSKGNLYYHFKTKENLFLEILNIEESKWQEQWKKEQIKAKTNREKFYLYNELSLTTEYYYPLQNAIIEFYTEYYKTNSINEKMNKLENKYIDAYHVIFKEGNLNGEWSINDVNAVSKIAANAVNGIVTFT--QNINERIKLMNKFSQIFLNGLS 187
11 21 31 41 51 61 71 81 91 101 111 121 131 141 151 161 | | 171 181
163 |
166
Chain E from PDB Type:PROTEIN Length:186
aligned with QACR_STAAU | P0A0N4 from UniProtKB/Swiss-Prot Length:188
Alignment length:186
11 21 31 41 51 61 71 81 91 101 111 121 131 141 151 161 171 181
QACR_STAAU 2 NLKDKILGVAKELFIKNGYNATTTGEIVKLSESSKGNLYYHFKTKENLFLEILNIEESKWQEQWKKEQIKCKTNREKFYLYNELSLTTEYYYPLQNAIIEFYTEYYKTNSINEKMNKLENKYIDAYHVIFKEGNLNGEWCINDVNAVSKIAANAVNGIVTFTHEQNINERIKLMNKFSQIFLNGLS 187
SCOP domains d2dtze1 E:2-72 Multidrug binding protein QacR d2dtze2 E:73-187 Multidrug binding protein QacR SCOP domains
CATH domains 2dtzE01 E:2-50 Homeodomain-like 2dtzE02 E:51-187 Tetracycline Repressor, domain 2 CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
Sec.struct. author hhhhhhhhhhhhhhhhhh....hhhhhhhhh..hhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhh.. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
PROSITE -----------------HTH_TETR_1 PDB: E:19-49 ------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
2dtz E 2 NLKDKILGVAKELFIKNGYNATTTGEIVKLSESSKGNLYYHFKTKENLFLEILNIEESKWQEQWKKEQIKAKTNREKFYLYNELSLTTEYYYPLQNAIIEFYTEYYKTNSINEKMNKLENKYIDAYHVIFKEGNLNGEWSINDVNAVSKIAANAVNGIVTFTHEQNINERIKLMNKFSQIFLNGLS 187
11 21 31 41 51 61 71 81 91 101 111 121 131 141 151 161 171 181
Legend: |
|
→ Mismatch |
(orange background) |
|
- |
→ Gap |
(green background, '-', border residues have a numbering label) |
|
|
→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
|
x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
|
extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |