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(-) Description

Title :  CRYSTAL STRUCTURE OF THE 2-HYDRAZINOPYRIDINE OF SEMICARBAZIDE-SENSITIVE AMINE OXIDASE
 
Authors :  E. Jakobsson, G. J. Kleywegt
Date :  09 Sep 05  (Deposition) - 20 Sep 06  (Release) - 03 Aug 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.90
Chains :  Asym. Unit :  A,B,C,D
Biol. Unit 1:  A,B  (1x)
Biol. Unit 2:  C,D  (1x)
Keywords :  Oxidoreductase, Adhesion Protein-1, 2-Hydroxypyridine, Metal-Binding, Cell Adhesion, Glycoprotein, Signal-Anchor, Tpq, Transmembrane (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  E. Jakobsson, J. Nilsson, D. Ogg, G. J. Kleywegt
Structure Of Human Semicarbazide-Sensitive Amine Oxidase/Vascular Adhesion Protein-1.
Acta Crystallogr. , Sect. D V. 61 1550 2005
PubMed-ID: 16239734  |  Reference-DOI: 10.1107/S0907444905028805

(-) Compounds

Molecule 1 - MEMBRANE COPPER AMINE OXIDASE
    Chains: A, B, C, D
    EC Number: 1.4.3.6
    Engineered: YES
    Expression System Cell Line: HEK293
    Fragment: EXTRA-CELLULAR DOMAINS, RESIDUES 29-763
    Organism Common: HUMAN
    Organism Scientific: HOMO SAPIENS
    Organism Taxid: 9606
    Synonym: SEMICARBAZIDE-SENSITIVE AMINE OXIDASE, VASCULAR ADHESION PROTEIN 1, VAP-1, HPAO

 Structural Features

(-) Chains, Units

  1234
Asymmetric Unit : ABCD
Biological Unit 1 (1x): AB  
Biological Unit 2 (1x):   CD

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (9, 81)

Asymmetric Unit (9, 81)
No.NameCountTypeFull Name
1BMA4Ligand/IonBETA-D-MANNOSE
2CA8Ligand/IonCALCIUM ION
3CL4Ligand/IonCHLORIDE ION
4CU30Ligand/IonCOPPER (II) ION
5FUL4Ligand/IonBETA-L-FUCOSE
6MAN2Ligand/IonALPHA-D-MANNOSE
7NAG22Ligand/IonN-ACETYL-D-GLUCOSAMINE
8NDG3Ligand/Ion2-(ACETYLAMINO)-2-DEOXY-A-D-GLUCOPYRANOSE
9PAQ4Mod. Amino Acid2-OXY-4-HYDROXY-5-(2-HYDRAZINOPYRIDINE)PHENYLALANINE
Biological Unit 1 (6, 19)
No.NameCountTypeFull Name
1BMA2Ligand/IonBETA-D-MANNOSE
2CA-1Ligand/IonCALCIUM ION
3CL-1Ligand/IonCHLORIDE ION
4CU-1Ligand/IonCOPPER (II) ION
5FUL2Ligand/IonBETA-L-FUCOSE
6MAN1Ligand/IonALPHA-D-MANNOSE
7NAG11Ligand/IonN-ACETYL-D-GLUCOSAMINE
8NDG1Ligand/Ion2-(ACETYLAMINO)-2-DEOXY-A-D-GLUCOPYRANOSE
9PAQ2Mod. Amino Acid2-OXY-4-HYDROXY-5-(2-HYDRAZINOPYRIDINE)PHENYLALANINE
Biological Unit 2 (6, 20)
No.NameCountTypeFull Name
1BMA2Ligand/IonBETA-D-MANNOSE
2CA-1Ligand/IonCALCIUM ION
3CL-1Ligand/IonCHLORIDE ION
4CU-1Ligand/IonCOPPER (II) ION
5FUL2Ligand/IonBETA-L-FUCOSE
6MAN1Ligand/IonALPHA-D-MANNOSE
7NAG11Ligand/IonN-ACETYL-D-GLUCOSAMINE
8NDG2Ligand/Ion2-(ACETYLAMINO)-2-DEOXY-A-D-GLUCOPYRANOSE
9PAQ2Mod. Amino Acid2-OXY-4-HYDROXY-5-(2-HYDRAZINOPYRIDINE)PHENYLALANINE

(-) Sites  (60, 60)

Asymmetric Unit (60, 60)
No.NameEvidenceResiduesDescription
01AC1SOFTWAREASP A:529 , LEU A:530 , ASP A:531 , ASP A:673 , LEU A:674BINDING SITE FOR RESIDUE CA A1736
02AC2SOFTWAREHIS A:520 , HIS A:522 , HIS A:684 , HOH A:2018BINDING SITE FOR RESIDUE CU A1737
03AC3SOFTWAREGLU A:572 , LYS A:638 , PHE A:663 , ASN A:665 , GLU A:667 , HOH A:2014BINDING SITE FOR RESIDUE CA A1738
04AC4SOFTWAREARG A:383 , SER A:619 , GLN B:560BINDING SITE FOR RESIDUE CL A1739
05AC5SOFTWAREHIS A:112BINDING SITE FOR RESIDUE CU A1740
06AC6SOFTWAREGLU A:140 , HIS A:160 , SER A:646BINDING SITE FOR RESIDUE CU A1741
07AC7SOFTWAREHIS A:167BINDING SITE FOR RESIDUE CU A1742
08AC8SOFTWAREASP A:412 , HIS A:414BINDING SITE FOR RESIDUE CU A1743
09AC9SOFTWAREHIS A:444 , ASP A:446BINDING SITE FOR RESIDUE CU A1744
10BC1SOFTWAREHIS A:687 , ASP A:690BINDING SITE FOR RESIDUE CU A1745
11BC2SOFTWAREGLN A:560 , SER B:619BINDING SITE FOR RESIDUE CL A1746
12BC3SOFTWARELYS B:106 , ASP B:529 , LEU B:530 , ASP B:531 , ASP B:673 , LEU B:674BINDING SITE FOR RESIDUE CA B1741
13BC4SOFTWAREPAQ B:471 , HIS B:520 , HIS B:522 , HIS B:684 , HOH B:2019BINDING SITE FOR RESIDUE CU B1742
14BC5SOFTWAREGLU B:572 , LYS B:638 , PHE B:663 , ASN B:665 , GLU B:667BINDING SITE FOR RESIDUE CA B1743
15BC6SOFTWAREHIS B:112BINDING SITE FOR RESIDUE CU B1744
16BC7SOFTWAREGLU B:140 , HIS B:160 , PHE B:648BINDING SITE FOR RESIDUE CU B1745
17BC8SOFTWAREHIS B:167BINDING SITE FOR RESIDUE CU B1746
18BC9SOFTWAREHIS B:414BINDING SITE FOR RESIDUE CU B1747
19CC1SOFTWAREHIS B:444 , ASP B:446 , GLY B:727BINDING SITE FOR RESIDUE CU B1748
20CC2SOFTWARELEU B:290 , HIS B:514BINDING SITE FOR RESIDUE CU B1749
21CC3SOFTWARETYR A:586 , ARG A:706 , HIS B:687BINDING SITE FOR RESIDUE CU B1750
22CC4SOFTWAREASP C:529 , LEU C:530 , ASP C:531 , ASP C:673 , LEU C:674BINDING SITE FOR RESIDUE CA C1737
23CC5SOFTWAREPAQ C:471 , HIS C:520 , HIS C:522 , HIS C:684BINDING SITE FOR RESIDUE CU C1738
24CC6SOFTWAREGLU C:572 , LYS C:638 , PHE C:663 , ASN C:665 , GLU C:667BINDING SITE FOR RESIDUE CA C1739
25CC7SOFTWAREARG C:383 , GLN D:560BINDING SITE FOR RESIDUE CL C1740
26CC8SOFTWAREHIS C:112BINDING SITE FOR RESIDUE CU C1741
27CC9SOFTWAREGLU C:140 , HIS C:160BINDING SITE FOR RESIDUE CU C1742
28DC1SOFTWAREHIS C:167BINDING SITE FOR RESIDUE CU C1743
29DC2SOFTWAREHIS C:414BINDING SITE FOR RESIDUE CU C1744
30DC3SOFTWAREHIS C:444 , ASP C:446BINDING SITE FOR RESIDUE CU C1745
31DC4SOFTWAREHIS C:593BINDING SITE FOR RESIDUE CU C1746
32DC5SOFTWAREHIS C:687 , ARG D:706BINDING SITE FOR RESIDUE CU C1747
33DC6SOFTWARELYS D:106 , ASP D:529 , LEU D:530 , ASP D:531 , ASP D:673 , LEU D:674BINDING SITE FOR RESIDUE CA D1741
34DC7SOFTWAREPAQ D:471 , HIS D:520 , HIS D:522 , HIS D:684BINDING SITE FOR RESIDUE CU D1742
35DC8SOFTWAREGLU D:572 , PHE D:663 , ASN D:665 , GLU D:667BINDING SITE FOR RESIDUE CA D1743
36DC9SOFTWARELEU C:559 , GLN C:560 , ARG D:383BINDING SITE FOR RESIDUE CL D1744
37EC1SOFTWAREHIS D:112BINDING SITE FOR RESIDUE CU D1745
38EC2SOFTWAREGLU D:140 , HIS D:160 , SER D:646 , PHE D:648BINDING SITE FOR RESIDUE CU D1746
39EC3SOFTWAREPRO D:165 , HIS D:167BINDING SITE FOR RESIDUE CU D1747
40EC4SOFTWAREASP D:412 , HIS D:414BINDING SITE FOR RESIDUE CU D1748
41EC5SOFTWAREHIS D:444 , ASP D:446 , GLY D:727BINDING SITE FOR RESIDUE CU D1749
42EC6SOFTWAREHIS D:687 , ASP D:690BINDING SITE FOR RESIDUE CU D1750
43EC7SOFTWAREPHE A:130 , GLN A:133 , ASN A:137 , SER A:139 , PRO A:163 , LEU A:164BINDING SITE FOR CHAIN A OF SUGAR BOUND TO ASN A 137 RESIDUES 1730 TO 1731
44EC8SOFTWAREARG A:206 , VAL A:209 , ASN A:232BINDING SITE FOR CHAIN A OF SUGAR BOUND TO ASN A 232 RESIDUES 1734 TO 1734
45EC9SOFTWARESER A:234 , ASN A:294BINDING SITE FOR CHAIN A OF SUGAR BOUND TO ASN A 294 RESIDUES 1735 TO 1735
46FC1SOFTWAREGLU A:282 , ASN A:592 , HIS A:593BINDING SITE FOR CHAIN A OF SUGAR BOUND TO ASN A 592 RESIDUES 1732 TO 1733
47FC2SOFTWAREPHE B:130 , GLN B:133 , ASN B:137 , VAL B:157 , PRO B:163 , ARG B:206 , VAL B:209 , ASN B:232 , GLU B:282 , ASN B:294 , ASN B:592 , HIS B:593 , BMA B:1739BINDING SITE FOR CHAIN B OF SUGAR BOUND TO ASN B 137 RESIDUES 1730 TO 1737
48FC3SOFTWAREARG B:206 , VAL B:209 , ASN B:232BINDING SITE FOR CHAIN B OF SUGAR BOUND TO ASN B 232 RESIDUES 1735 TO 1735
49FC4SOFTWAREASN B:294BINDING SITE FOR CHAIN B OF SUGAR BOUND TO ASN B 294 RESIDUES 1736 TO 1736
50FC5SOFTWAREHIS B:196 , HIS B:203 , ARG B:206 , VAL B:209 , ASN B:232 , GLU B:282 , ASN B:294 , ASN B:592 , HIS B:593 , ASN B:666 , NAG B:1731BINDING SITE FOR CHAIN B OF SUGAR BOUND TO ASN B 592 RESIDUES 1732 TO 1740
51FC6SOFTWAREASN B:666BINDING SITE FOR CHAIN B OF SUGAR BOUND TO ASN B 666 RESIDUES 1738 TO 1738
52FC7SOFTWAREPHE C:130 , GLN C:133 , ASN C:137BINDING SITE FOR CHAIN C OF SUGAR BOUND TO ASN C 137 RESIDUES 1730 TO 1731
53FC8SOFTWAREVAL C:209 , ASN C:232 , SER C:234 , TYR D:448BINDING SITE FOR CHAIN C OF SUGAR BOUND TO ASN C 232 RESIDUES 1735 TO 1735
54FC9SOFTWAREASN C:294BINDING SITE FOR CHAIN C OF SUGAR BOUND TO ASN C 294 RESIDUES 1736 TO 1736
55GC1SOFTWAREGLU C:282 , ASN C:592 , HIS C:593 , GLY C:671BINDING SITE FOR CHAIN C OF SUGAR BOUND TO ASN C 592 RESIDUES 1732 TO 1734
56GC2SOFTWARESER C:449 , PHE D:130 , GLN D:133 , ASN D:137 , MET D:152 , VAL D:157 , PRO D:163 , ARG D:206 , ASN D:232 , SER D:234 , GLU D:282 , ASN D:294 , GLU D:536 , ASN D:592 , GLY D:671 , BMA D:1739BINDING SITE FOR CHAIN D OF SUGAR BOUND TO ASN D 137 RESIDUES 1730 TO 1737
57GC3SOFTWARESER C:449 , ARG D:206 , ASN D:232 , SER D:234BINDING SITE FOR CHAIN D OF SUGAR BOUND TO ASN D 232 RESIDUES 1735 TO 1735
58GC4SOFTWAREASN D:294BINDING SITE FOR CHAIN D OF SUGAR BOUND TO ASN D 294 RESIDUES 1736 TO 1736
59GC5SOFTWARESER C:449 , HIS D:203 , ARG D:206 , ASN D:232 , SER D:234 , GLU D:282 , ASN D:294 , GLU D:536 , ASN D:592 , ASN D:666 , GLY D:671 , NAG D:1731BINDING SITE FOR CHAIN D OF SUGAR BOUND TO ASN D 592 RESIDUES 1732 TO 1740
60GC6SOFTWAREASN D:666BINDING SITE FOR CHAIN D OF SUGAR BOUND TO ASN D 666 RESIDUES 1738 TO 1738

(-) SS Bonds  (8, 8)

Asymmetric Unit
No.Residues
1A:198 -A:199
2A:404 -A:430
3B:198 -B:199
4B:404 -B:430
5C:198 -C:199
6C:404 -C:430
7D:198 -D:199
8D:404 -D:430

(-) Cis Peptide Bonds  (15, 15)

Asymmetric Unit
No.Residues
1Leu A:146 -Pro A:147
2Ala A:214 -Pro A:215
3Ile A:691 -Pro A:692
4Gly B:144 -Pro B:145
5Leu B:146 -Pro B:147
6Ala B:214 -Pro B:215
7Ile B:691 -Pro B:692
8Gly C:144 -Pro C:145
9Leu C:146 -Pro C:147
10Ala C:214 -Pro C:215
11Ile C:691 -Pro C:692
12Gly D:144 -Pro D:145
13Leu D:146 -Pro D:147
14Ala D:214 -Pro D:215
15Ile D:691 -Pro D:692

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (12, 48)

Asymmetric Unit (12, 48)
  dbSNPPDB
No.SourceVariant IDVariantUniProt IDStatusIDChainVariant
01UniProtVAR_052603R78QAOC3_HUMANPolymorphism402680A/B/C/DR78Q
02UniProtVAR_025027H167YAOC3_HUMANPolymorphism2228470A/B/C/DH167Y
03UniProtVAR_052604V171MAOC3_HUMANPolymorphism408038A/B/C/DV171M
04UniProtVAR_052605H203RAOC3_HUMANPolymorphism630079A/B/C/DH203R
05UniProtVAR_012064Y317HAOC3_HUMANPolymorphism438287A/B/C/DY317H
06UniProtVAR_024343R329QAOC3_HUMANPolymorphism2229595A/B/C/DR329Q
07UniProtVAR_025028I371TAOC3_HUMANPolymorphism35097308A/B/C/DI371T
08UniProtVAR_025029A408SAOC3_HUMANPolymorphism35643019A/B/C/DA408S
09UniProtVAR_025030R426HAOC3_HUMANPolymorphism33986943A/B/C/DR426H
10UniProtVAR_025031R441WAOC3_HUMANPolymorphism2229596A/B/C/DR441W
11UniProtVAR_025032A582TAOC3_HUMANPolymorphism34987927A/B/C/DA582T
12UniProtVAR_025033G700SAOC3_HUMANPolymorphism477207A/B/C/DG700S
  SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)
Biological Unit 1 (12, 24)
  dbSNPPDB
No.SourceVariant IDVariantUniProt IDStatusIDChainVariant
01UniProtVAR_052603R78QAOC3_HUMANPolymorphism402680A/BR78Q
02UniProtVAR_025027H167YAOC3_HUMANPolymorphism2228470A/BH167Y
03UniProtVAR_052604V171MAOC3_HUMANPolymorphism408038A/BV171M
04UniProtVAR_052605H203RAOC3_HUMANPolymorphism630079A/BH203R
05UniProtVAR_012064Y317HAOC3_HUMANPolymorphism438287A/BY317H
06UniProtVAR_024343R329QAOC3_HUMANPolymorphism2229595A/BR329Q
07UniProtVAR_025028I371TAOC3_HUMANPolymorphism35097308A/BI371T
08UniProtVAR_025029A408SAOC3_HUMANPolymorphism35643019A/BA408S
09UniProtVAR_025030R426HAOC3_HUMANPolymorphism33986943A/BR426H
10UniProtVAR_025031R441WAOC3_HUMANPolymorphism2229596A/BR441W
11UniProtVAR_025032A582TAOC3_HUMANPolymorphism34987927A/BA582T
12UniProtVAR_025033G700SAOC3_HUMANPolymorphism477207A/BG700S
  SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)
Biological Unit 2 (12, 24)
  dbSNPPDB
No.SourceVariant IDVariantUniProt IDStatusIDChainVariant
01UniProtVAR_052603R78QAOC3_HUMANPolymorphism402680C/DR78Q
02UniProtVAR_025027H167YAOC3_HUMANPolymorphism2228470C/DH167Y
03UniProtVAR_052604V171MAOC3_HUMANPolymorphism408038C/DV171M
04UniProtVAR_052605H203RAOC3_HUMANPolymorphism630079C/DH203R
05UniProtVAR_012064Y317HAOC3_HUMANPolymorphism438287C/DY317H
06UniProtVAR_024343R329QAOC3_HUMANPolymorphism2229595C/DR329Q
07UniProtVAR_025028I371TAOC3_HUMANPolymorphism35097308C/DI371T
08UniProtVAR_025029A408SAOC3_HUMANPolymorphism35643019C/DA408S
09UniProtVAR_025030R426HAOC3_HUMANPolymorphism33986943C/DR426H
10UniProtVAR_025031R441WAOC3_HUMANPolymorphism2229596C/DR441W
11UniProtVAR_025032A582TAOC3_HUMANPolymorphism34987927C/DA582T
12UniProtVAR_025033G700SAOC3_HUMANPolymorphism477207C/DG700S
  SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)

(-) PROSITE Motifs  (2, 8)

Asymmetric Unit (2, 8)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1COPPER_AMINE_OXID_1PS01164 Copper amine oxidase topaquinone signature.AOC3_HUMAN460-473
 
 
 		  4A:460-473
B:460-473
C:460-473
D:460-473
2COPPER_AMINE_OXID_2PS01165 Copper amine oxidase copper-binding site signature.AOC3_HUMAN679-692
 
 
 		  4A:679-692
B:679-692
C:679-692
D:679-692
Biological Unit 1 (2, 4)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1COPPER_AMINE_OXID_1PS01164 Copper amine oxidase topaquinone signature.AOC3_HUMAN460-473
 
 
 		  2A:460-473
B:460-473
-
-
2COPPER_AMINE_OXID_2PS01165 Copper amine oxidase copper-binding site signature.AOC3_HUMAN679-692
 
 
 		  2A:679-692
B:679-692
-
-
Biological Unit 2 (2, 4)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1COPPER_AMINE_OXID_1PS01164 Copper amine oxidase topaquinone signature.AOC3_HUMAN460-473
 
 
 		  2-
-
C:460-473
D:460-473
2COPPER_AMINE_OXID_2PS01165 Copper amine oxidase copper-binding site signature.AOC3_HUMAN679-692
 
 
 		  2-
-
C:679-692
D:679-692

(-) Exons   (4, 16)

Asymmetric Unit (4, 16)
 ENSEMBLUniProtKBPDB
No.Transcript IDExonExon IDGenome LocationLengthIDLocationLengthCountLocationLength
1.1ENST000003084231ENSE00001213814chr17:41003201-410049601760AOC3_HUMAN1-5345344A:58-534
B:58-534
C:58-534
D:58-534		477
477
477
477
1.2ENST000003084232ENSE00000899074chr17:41006465-41006750286AOC3_HUMAN534-629964A:534-629
B:534-629
C:534-629
D:534-629		96
96
96
96
1.3ENST000003084233ENSE00001213800chr17:41007461-41007590130AOC3_HUMAN629-672444A:629-672
B:629-672
C:629-672
D:629-672		44
44
44
44
1.4ENST000003084234ENSE00001178316chr17:41008292-410101381847AOC3_HUMAN673-763914A:673-729
B:673-729
C:673-729
D:673-729		57
57
57
57

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:672
 aligned with AOC3_HUMAN | Q16853 from UniProtKB/Swiss-Prot  Length:763

    Alignment length:672
                                    67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437       447       457       467       477       487       497       507       517       527       537       547       557       567       577       587       597       607       617       627       637       647       657       667       677       687       697       707       717       727  
           AOC3_HUMAN    58 QLFADLSREELTAVMRFLTQRLGPGLVDAAQARPSDNCVFSVELQLPPKAAALAHLDRGSPPPAREALAIVFFGRQPQPNVSELVVGPLPHPSYMRDVTVERHGGPLPYHRRPVLFQEYLDIDQMIFNRELPQASGLLHHCCFYKHRGRNLVTMTTAPRGLQSGDRATWFGLYYNISGAGFFLHHVGLELLVNHKALDPARWTIQKVFYQGRYYDSLAQLEAQFEAGLVNVVLIPDNGTGGSWSLKSPVPPGPAPPLQFYPQGPRFSVQGSRVASSLWTFSFGLGAFSGPRIFDVRFQGERLVYEISLQEALAIYGGNSPAAMTTRYVDGGFGMGKYTTPLTRGVDCPYLATYVDWHFLLESQAPKTIRDAFCVFEQNQGLPLRRHHSDLYSHYFGGLAETVLVVRSMSTLLNYDYVWDTVFHPSGAIEIRFYATGYISSAFLFGATGKYGNQVSEHTLGTVHTHSAHFKVDLDVAGLENWVWAEDMVFVPMAVPWSPEHQLQRLQVTRKLLEMEEQAAFLVGSATPRYLYLASNHSNKWGHPRGYRIQMLSFAGEPLPQNSSMARGFSWERYQLAVTQRKEEEPSSSSVFNQNDPWAPTVDFSDFINNETIAGKDLVAWVTAGFLHIPHAEDIPNTVTVGNGVGFFLRPYNFFDEDPSFYSADSIYFRGDQ 729
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains 2c11A01 A:58-171  [code=3.10.450.40, no name defined]                                                             2c11A02 A:172-307  [code=3.10.450.40, no name defined]                                                                                  2c11A03 A:308-729 Copper amine oxidase, Domain 3                                                                                                                                                                                                                                                                                                                                                                                       CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ......hhhhhhhhhhhhhhhh..............eeeeeeeee..hhhhhhhhhh........eeeeeeee......eeeeeee........eeehhhhhhh....hhhh..hhhhhhhhhhhhhh.hhhhhhhhhhhhh........eeee.............eeeeeee..........eeeeeeeee.........eeeeeee..eee.hhhhhhhhhhhh...........................................................................................hhhhhh...hhhhh.....ee............eeeeeeeee.....eeeeeeeeeeeeeeeeeeeeee......eeeeeeeeeeeeeeee..............................eee........eeeee..eeee....................................................hhhhhh............................................hhhhhhhh..............................hhhhhh......................hhhhh......................hhhhhh...eeee... Sec.struct. author
                 SAPs(SNPs) --------------------Q----------------------------------------------------------------------------------------Y---M-------------------------------R-----------------------------------------------------------------------------------------------------------------H-----------Q-----------------------------------------T------------------------------------S-----------------H--------------W--------------------------------------------------------------------------------------------------------------------------------------------T---------------------------------------------------------------------------------------------------------------------S----------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------COPPER_AMINE_O-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------COPPER_AMINE_O------------------------------------- PROSITE
           Transcript 1 (1) Exon 1.1  PDB: A:58-534 UniProt: 1-534 [INCOMPLETE]                                                                                                                                                                                                                                                                                                                                                                                                                                          ----------------------------------------------------------------------------------------------Exon 1.3  PDB: A:629-672 UniProt: 629-672   Exon 1.4  PDB: A:673-729 UniProt: 673-763 [INCOMPLETE]    Transcript 1 (1)
           Transcript 1 (2) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------Exon 1.2  PDB: A:534-629 UniProt: 534-629                                                       ---------------------------------------------------------------------------------------------------- Transcript 1 (2)
                 2c11 A  58 QLFADLSREELTAVMRFLTQRLGPGLVDAAQARPSDNCVFSVELQLPPKAAALAHLDRGSPPPAREALAIVFFGRQPQPNVSELVVGPLPHPSYMRDVTVERHGGPLPYHRRPVLFQEYLDIDQMIFNRELPQASGLLHHCCFYKHRGRNLVTMTTAPRGLQSGDRATWFGLYYNISGAGFFLHHVGLELLVNHKALDPARWTIQKVFYQGRYYDSLAQLEAQFEAGLVNVVLIPDNGTGGSWSLKSPVPPGPAPPLQFYPQGPRFSVQGSRVASSLWTFSFGLGAFSGPRIFDVRFQGERLVYEISLQEALAIYGGNSPAAMTTRYVDGGFGMGKYTTPLTRGVDCPYLATYVDWHFLLESQAPKTIRDAFCVFEQNQGLPLRRHHSDLYSHYFGGLAETVLVVRSMSTLLNyDYVWDTVFHPSGAIEIRFYATGYISSAFLFGATGKYGNQVSEHTLGTVHTHSAHFKVDLDVAGLENWVWAEDMVFVPMAVPWSPEHQLQRLQVTRKLLEMEEQAAFLVGSATPRYLYLASNHSNKWGHPRGYRIQMLSFAGEPLPQNSSMARGFSWERYQLAVTQRKEEEPSSSSVFNQNDPWAPTVDFSDFINNETIAGKDLVAWVTAGFLHIPHAEDIPNTVTVGNGVGFFLRPYNFFDEDPSFYSADSIYFRGDQ 729
                                    67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437       447       457       467   |   477       487       497       507       517       527       537       547       557       567       577       587       597       607       617       627       637       647       657       667       677       687       697       707       717       727  
                                                                                                                                                                                                                                                                                                                                                                                                                                                       471-PAQ                                                                                                                                                                                                                                                              


Chain B from PDB  Type:PROTEIN  Length:672
 aligned with AOC3_HUMAN | Q16853 from UniProtKB/Swiss-Prot  Length:763

    Alignment length:672
                                    67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437       447       457       467       477       487       497       507       517       527       537       547       557       567       577       587       597       607       617       627       637       647       657       667       677       687       697       707       717       727  
           AOC3_HUMAN    58 QLFADLSREELTAVMRFLTQRLGPGLVDAAQARPSDNCVFSVELQLPPKAAALAHLDRGSPPPAREALAIVFFGRQPQPNVSELVVGPLPHPSYMRDVTVERHGGPLPYHRRPVLFQEYLDIDQMIFNRELPQASGLLHHCCFYKHRGRNLVTMTTAPRGLQSGDRATWFGLYYNISGAGFFLHHVGLELLVNHKALDPARWTIQKVFYQGRYYDSLAQLEAQFEAGLVNVVLIPDNGTGGSWSLKSPVPPGPAPPLQFYPQGPRFSVQGSRVASSLWTFSFGLGAFSGPRIFDVRFQGERLVYEISLQEALAIYGGNSPAAMTTRYVDGGFGMGKYTTPLTRGVDCPYLATYVDWHFLLESQAPKTIRDAFCVFEQNQGLPLRRHHSDLYSHYFGGLAETVLVVRSMSTLLNYDYVWDTVFHPSGAIEIRFYATGYISSAFLFGATGKYGNQVSEHTLGTVHTHSAHFKVDLDVAGLENWVWAEDMVFVPMAVPWSPEHQLQRLQVTRKLLEMEEQAAFLVGSATPRYLYLASNHSNKWGHPRGYRIQMLSFAGEPLPQNSSMARGFSWERYQLAVTQRKEEEPSSSSVFNQNDPWAPTVDFSDFINNETIAGKDLVAWVTAGFLHIPHAEDIPNTVTVGNGVGFFLRPYNFFDEDPSFYSADSIYFRGDQ 729
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains 2c11B01 B:58-171  [code=3.10.450.40, no name defined]                                                             2c11B02 B:172-307  [code=3.10.450.40, no name defined]                                                                                  2c11B03 B:308-729 Copper amine oxidase, Domain 3                                                                                                                                                                                                                                                                                                                                                                                       CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ......hhhhhhhhhhhhhhhh...eehhhhh....eeeeeeeee..hhhhhhhhhh........eeeeeeee......eeeeeeee..........hhhhhhh.....hhh..hhhhhhhhhhhhhh.hhhhhhhhhhhhh........eeee............eeeeeeee..........eeeeeeeee....hhhhheeeeeee..eee.hhhhhhhhhhhh...........................................................................................hhhhhhh..hhhhh...................eeeeeeeee.....eeeeeeeeeeeeeeeeeeeeeee.....eeeeeeeeeeeeeeee..............................eee........eeeee..eeee.....................................................hhh..................................................hhhh..............................hhhhhh......................hhhhh......................hhhhhh.......... Sec.struct. author
                 SAPs(SNPs) --------------------Q----------------------------------------------------------------------------------------Y---M-------------------------------R-----------------------------------------------------------------------------------------------------------------H-----------Q-----------------------------------------T------------------------------------S-----------------H--------------W--------------------------------------------------------------------------------------------------------------------------------------------T---------------------------------------------------------------------------------------------------------------------S----------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------COPPER_AMINE_O-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------COPPER_AMINE_O------------------------------------- PROSITE
           Transcript 1 (1) Exon 1.1  PDB: B:58-534 UniProt: 1-534 [INCOMPLETE]                                                                                                                                                                                                                                                                                                                                                                                                                                          ----------------------------------------------------------------------------------------------Exon 1.3  PDB: B:629-672 UniProt: 629-672   Exon 1.4  PDB: B:673-729 UniProt: 673-763 [INCOMPLETE]    Transcript 1 (1)
           Transcript 1 (2) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------Exon 1.2  PDB: B:534-629 UniProt: 534-629                                                       ---------------------------------------------------------------------------------------------------- Transcript 1 (2)
                 2c11 B  58 QLFADLSREELTAVMRFLTQRLGPGLVDAAQARPSDNCVFSVELQLPPKAAALAHLDRGSPPPAREALAIVFFGRQPQPNVSELVVGPLPHPSYMRDVTVERHGGPLPYHRRPVLFQEYLDIDQMIFNRELPQASGLLHHCCFYKHRGRNLVTMTTAPRGLQSGDRATWFGLYYNISGAGFFLHHVGLELLVNHKALDPARWTIQKVFYQGRYYDSLAQLEAQFEAGLVNVVLIPDNGTGGSWSLKSPVPPGPAPPLQFYPQGPRFSVQGSRVASSLWTFSFGLGAFSGPRIFDVRFQGERLVYEISLQEALAIYGGNSPAAMTTRYVDGGFGMGKYTTPLTRGVDCPYLATYVDWHFLLESQAPKTIRDAFCVFEQNQGLPLRRHHSDLYSHYFGGLAETVLVVRSMSTLLNyDYVWDTVFHPSGAIEIRFYATGYISSAFLFGATGKYGNQVSEHTLGTVHTHSAHFKVDLDVAGLENWVWAEDMVFVPMAVPWSPEHQLQRLQVTRKLLEMEEQAAFLVGSATPRYLYLASNHSNKWGHPRGYRIQMLSFAGEPLPQNSSMARGFSWERYQLAVTQRKEEEPSSSSVFNQNDPWAPTVDFSDFINNETIAGKDLVAWVTAGFLHIPHAEDIPNTVTVGNGVGFFLRPYNFFDEDPSFYSADSIYFRGDQ 729
                                    67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437       447       457       467   |   477       487       497       507       517       527       537       547       557       567       577       587       597       607       617       627       637       647       657       667       677       687       697       707       717       727  
                                                                                                                                                                                                                                                                                                                                                                                                                                                       471-PAQ                                                                                                                                                                                                                                                              


Chain C from PDB  Type:PROTEIN  Length:672
 aligned with AOC3_HUMAN | Q16853 from UniProtKB/Swiss-Prot  Length:763

    Alignment length:672
                                    67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437       447       457       467       477       487       497       507       517       527       537       547       557       567       577       587       597       607       617       627       637       647       657       667       677       687       697       707       717       727  
           AOC3_HUMAN    58 QLFADLSREELTAVMRFLTQRLGPGLVDAAQARPSDNCVFSVELQLPPKAAALAHLDRGSPPPAREALAIVFFGRQPQPNVSELVVGPLPHPSYMRDVTVERHGGPLPYHRRPVLFQEYLDIDQMIFNRELPQASGLLHHCCFYKHRGRNLVTMTTAPRGLQSGDRATWFGLYYNISGAGFFLHHVGLELLVNHKALDPARWTIQKVFYQGRYYDSLAQLEAQFEAGLVNVVLIPDNGTGGSWSLKSPVPPGPAPPLQFYPQGPRFSVQGSRVASSLWTFSFGLGAFSGPRIFDVRFQGERLVYEISLQEALAIYGGNSPAAMTTRYVDGGFGMGKYTTPLTRGVDCPYLATYVDWHFLLESQAPKTIRDAFCVFEQNQGLPLRRHHSDLYSHYFGGLAETVLVVRSMSTLLNYDYVWDTVFHPSGAIEIRFYATGYISSAFLFGATGKYGNQVSEHTLGTVHTHSAHFKVDLDVAGLENWVWAEDMVFVPMAVPWSPEHQLQRLQVTRKLLEMEEQAAFLVGSATPRYLYLASNHSNKWGHPRGYRIQMLSFAGEPLPQNSSMARGFSWERYQLAVTQRKEEEPSSSSVFNQNDPWAPTVDFSDFINNETIAGKDLVAWVTAGFLHIPHAEDIPNTVTVGNGVGFFLRPYNFFDEDPSFYSADSIYFRGDQ 729
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains 2c11C01 C:58-171  [code=3.10.450.40, no name defined]                                                             2c11C02 C:172-307  [code=3.10.450.40, no name defined]                                                                                  2c11C03 C:308-729 Copper amine oxidase, Domain 3                                                                                                                                                                                                                                                                                                                                                                                       CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ......hhhhhhhhhhhhhhhh..............eeeeeeeee..hhhhhhhhhh........eeeeeeee......eeeeeeee......eeeehhhhhhh..ee.hhh..hhhhhhhhhhhhhh.hhhhhhhhhhhhh........eeee.............eeeeeee..........eeeeeeeee.........eeeeeee..eee.hhhhhhhhhhhh...........................................................................................hhhhhh...hhhhh...................eeeeeeeee.....eeeeeeeeeeeeeeeeeeeeee......eeeeeeeeeeeeeeee..............................eee........eeeee..eeee....................................................hhhhhh............................................hhhhhhhh..............................hhhhhh......................hhhhh......................hhhhhh.......... Sec.struct. author
                 SAPs(SNPs) --------------------Q----------------------------------------------------------------------------------------Y---M-------------------------------R-----------------------------------------------------------------------------------------------------------------H-----------Q-----------------------------------------T------------------------------------S-----------------H--------------W--------------------------------------------------------------------------------------------------------------------------------------------T---------------------------------------------------------------------------------------------------------------------S----------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------COPPER_AMINE_O-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------COPPER_AMINE_O------------------------------------- PROSITE
           Transcript 1 (1) Exon 1.1  PDB: C:58-534 UniProt: 1-534 [INCOMPLETE]                                                                                                                                                                                                                                                                                                                                                                                                                                          ----------------------------------------------------------------------------------------------Exon 1.3  PDB: C:629-672 UniProt: 629-672   Exon 1.4  PDB: C:673-729 UniProt: 673-763 [INCOMPLETE]    Transcript 1 (1)
           Transcript 1 (2) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------Exon 1.2  PDB: C:534-629 UniProt: 534-629                                                       ---------------------------------------------------------------------------------------------------- Transcript 1 (2)
                 2c11 C  58 QLFADLSREELTAVMRFLTQRLGPGLVDAAQARPSDNCVFSVELQLPPKAAALAHLDRGSPPPAREALAIVFFGRQPQPNVSELVVGPLPHPSYMRDVTVERHGGPLPYHRRPVLFQEYLDIDQMIFNRELPQASGLLHHCCFYKHRGRNLVTMTTAPRGLQSGDRATWFGLYYNISGAGFFLHHVGLELLVNHKALDPARWTIQKVFYQGRYYDSLAQLEAQFEAGLVNVVLIPDNGTGGSWSLKSPVPPGPAPPLQFYPQGPRFSVQGSRVASSLWTFSFGLGAFSGPRIFDVRFQGERLVYEISLQEALAIYGGNSPAAMTTRYVDGGFGMGKYTTPLTRGVDCPYLATYVDWHFLLESQAPKTIRDAFCVFEQNQGLPLRRHHSDLYSHYFGGLAETVLVVRSMSTLLNyDYVWDTVFHPSGAIEIRFYATGYISSAFLFGATGKYGNQVSEHTLGTVHTHSAHFKVDLDVAGLENWVWAEDMVFVPMAVPWSPEHQLQRLQVTRKLLEMEEQAAFLVGSATPRYLYLASNHSNKWGHPRGYRIQMLSFAGEPLPQNSSMARGFSWERYQLAVTQRKEEEPSSSSVFNQNDPWAPTVDFSDFINNETIAGKDLVAWVTAGFLHIPHAEDIPNTVTVGNGVGFFLRPYNFFDEDPSFYSADSIYFRGDQ 729
                                    67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437       447       457       467   |   477       487       497       507       517       527       537       547       557       567       577       587       597       607       617       627       637       647       657       667       677       687       697       707       717       727  
                                                                                                                                                                                                                                                                                                                                                                                                                                                       471-PAQ                                                                                                                                                                                                                                                              


Chain D from PDB  Type:PROTEIN  Length:672
 aligned with AOC3_HUMAN | Q16853 from UniProtKB/Swiss-Prot  Length:763

    Alignment length:672
                                    67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437       447       457       467       477       487       497       507       517       527       537       547       557       567       577       587       597       607       617       627       637       647       657       667       677       687       697       707       717       727  
           AOC3_HUMAN    58 QLFADLSREELTAVMRFLTQRLGPGLVDAAQARPSDNCVFSVELQLPPKAAALAHLDRGSPPPAREALAIVFFGRQPQPNVSELVVGPLPHPSYMRDVTVERHGGPLPYHRRPVLFQEYLDIDQMIFNRELPQASGLLHHCCFYKHRGRNLVTMTTAPRGLQSGDRATWFGLYYNISGAGFFLHHVGLELLVNHKALDPARWTIQKVFYQGRYYDSLAQLEAQFEAGLVNVVLIPDNGTGGSWSLKSPVPPGPAPPLQFYPQGPRFSVQGSRVASSLWTFSFGLGAFSGPRIFDVRFQGERLVYEISLQEALAIYGGNSPAAMTTRYVDGGFGMGKYTTPLTRGVDCPYLATYVDWHFLLESQAPKTIRDAFCVFEQNQGLPLRRHHSDLYSHYFGGLAETVLVVRSMSTLLNYDYVWDTVFHPSGAIEIRFYATGYISSAFLFGATGKYGNQVSEHTLGTVHTHSAHFKVDLDVAGLENWVWAEDMVFVPMAVPWSPEHQLQRLQVTRKLLEMEEQAAFLVGSATPRYLYLASNHSNKWGHPRGYRIQMLSFAGEPLPQNSSMARGFSWERYQLAVTQRKEEEPSSSSVFNQNDPWAPTVDFSDFINNETIAGKDLVAWVTAGFLHIPHAEDIPNTVTVGNGVGFFLRPYNFFDEDPSFYSADSIYFRGDQ 729
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains 2c11D01 D:58-171  [code=3.10.450.40, no name defined]                                                             2c11D02 D:172-307  [code=3.10.450.40, no name defined]                                                                                  2c11D03 D:308-729 Copper amine oxidase, Domain 3                                                                                                                                                                                                                                                                                                                                                                                       CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ......hhhhhhhhhhhhhhhh...ee.........eeeeeeeee..hhhhhhhhhh......................eeeeeeee......eeeehhhhhhh..ee.hhh..hhhhhhhhhhhhhh.hhhhhhhhhhhhh........eeee............eeeeeeee.....hhhh.eeeeeeeee....hhhhheeeeeee..eee.hhhhhhhhhhhh......................................eeee..eeee..eeeeeeee...eeeeeeeee..eeeeeeeeeeeeeeee...hhhhhhheee.hhh.............................................................eeeeeeeeeeeeeeee..............................eee........eeeee..eeee.................eeeeeeeeeeeeeeee..eeeeeeeeeeeeeeee..hhh.eee..............................................hhhh.eeeeeee.........hhhhh........hhhhhh.....eeeeeeeeeeeeeee..hhhhh......................hhhhhh...eee.... Sec.struct. author
                 SAPs(SNPs) --------------------Q----------------------------------------------------------------------------------------Y---M-------------------------------R-----------------------------------------------------------------------------------------------------------------H-----------Q-----------------------------------------T------------------------------------S-----------------H--------------W--------------------------------------------------------------------------------------------------------------------------------------------T---------------------------------------------------------------------------------------------------------------------S----------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------COPPER_AMINE_O-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------COPPER_AMINE_O------------------------------------- PROSITE
           Transcript 1 (1) Exon 1.1  PDB: D:58-534 UniProt: 1-534 [INCOMPLETE]                                                                                                                                                                                                                                                                                                                                                                                                                                          ----------------------------------------------------------------------------------------------Exon 1.3  PDB: D:629-672 UniProt: 629-672   Exon 1.4  PDB: D:673-729 UniProt: 673-763 [INCOMPLETE]    Transcript 1 (1)
           Transcript 1 (2) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------Exon 1.2  PDB: D:534-629 UniProt: 534-629                                                       ---------------------------------------------------------------------------------------------------- Transcript 1 (2)
                 2c11 D  58 QLFADLSREELTAVMRFLTQRLGPGLVDAAQARPSDNCVFSVELQLPPKAAALAHLDRGSPPPAREALAIVFFGRQPQPNVSELVVGPLPHPSYMRDVTVERHGGPLPYHRRPVLFQEYLDIDQMIFNRELPQASGLLHHCCFYKHRGRNLVTMTTAPRGLQSGDRATWFGLYYNISGAGFFLHHVGLELLVNHKALDPARWTIQKVFYQGRYYDSLAQLEAQFEAGLVNVVLIPDNGTGGSWSLKSPVPPGPAPPLQFYPQGPRFSVQGSRVASSLWTFSFGLGAFSGPRIFDVRFQGERLVYEISLQEALAIYGGNSPAAMTTRYVDGGFGMGKYTTPLTRGVDCPYLATYVDWHFLLESQAPKTIRDAFCVFEQNQGLPLRRHHSDLYSHYFGGLAETVLVVRSMSTLLNyDYVWDTVFHPSGAIEIRFYATGYISSAFLFGATGKYGNQVSEHTLGTVHTHSAHFKVDLDVAGLENWVWAEDMVFVPMAVPWSPEHQLQRLQVTRKLLEMEEQAAFLVGSATPRYLYLASNHSNKWGHPRGYRIQMLSFAGEPLPQNSSMARGFSWERYQLAVTQRKEEEPSSSSVFNQNDPWAPTVDFSDFINNETIAGKDLVAWVTAGFLHIPHAEDIPNTVTVGNGVGFFLRPYNFFDEDPSFYSADSIYFRGDQ 729
                                    67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437       447       457       467   |   477       487       497       507       517       527       537       547       557       567       577       587       597       607       617       627       637       647       657       667       677       687       697       707       717       727  
                                                                                                                                                                                                                                                                                                                                                                                                                                                       471-PAQ
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 2C11)

(-) CATH Domains  (2, 12)

Asymmetric Unit
(-)
Class: Alpha Beta (26913)
(-)
Class: Mainly Beta (13760)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 2C11)

(-) Gene Ontology  (28, 28)

Asymmetric Unit(hide GO term definitions)
Chain A,B,C,D   (AOC3_HUMAN | Q16853)
molecular function
    GO:0052595    aliphatic-amine oxidase activity    Catalysis of the reaction: an aliphatic amine + H2O + O2 = an aldehyde + NH3 + hydrogen peroxide + H+.
    GO:0052594    aminoacetone:oxygen oxidoreductase(deaminating) activity    Catalysis of the reaction: aminoacetone + H2O + O2 = methylglyoxal + NH3 + hydrogen peroxide + H+.
    GO:0005509    calcium ion binding    Interacting selectively and non-covalently with calcium ions (Ca2+).
    GO:0005507    copper ion binding    Interacting selectively and non-covalently with copper (Cu) ions.
    GO:0046872    metal ion binding    Interacting selectively and non-covalently with any metal ion.
    GO:0016491    oxidoreductase activity    Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
    GO:0052596    phenethylamine:oxygen oxidoreductase (deaminating) activity    Catalysis of the reaction: phenylethylamine + O2 + H2O = phenylacetaldehyde + NH3 + hydrogen peroxide + H+.
    GO:0008131    primary amine oxidase activity    Catalysis of the reaction: a primary amine + H2O + O2 = an aldehyde + NH3 + hydrogen peroxide.
    GO:0005515    protein binding    Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
    GO:0046982    protein heterodimerization activity    Interacting selectively and non-covalently with a nonidentical protein to form a heterodimer.
    GO:0042803    protein homodimerization activity    Interacting selectively and non-covalently with an identical protein to form a homodimer.
    GO:0048038    quinone binding    Interacting selectively and non-covalently with a quinone, any member of a class of diketones derivable from aromatic compounds by conversion of two CH groups into CO groups with any necessary rearrangement of double bonds.
    GO:0052593    tryptamine:oxygen oxidoreductase (deaminating) activity    Catalysis of the reaction: tryptamine + H2O + O2 = NH3 + indole acetaldehyde + hydrogen peroxide + H+.
biological process
    GO:0009308    amine metabolic process    The chemical reactions and pathways involving any organic compound that is weakly basic in character and contains an amino or a substituted amino group. Amines are called primary, secondary, or tertiary according to whether one, two, or three carbon atoms are attached to the nitrogen atom.
    GO:0007155    cell adhesion    The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules.
    GO:0006954    inflammatory response    The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages.
    GO:0055114    oxidation-reduction process    A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
    GO:0046677    response to antibiotic    Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an antibiotic stimulus. An antibiotic is a chemical substance produced by a microorganism which has the capacity to inhibit the growth of or to kill other microorganisms.
    GO:0006805    xenobiotic metabolic process    The chemical reactions and pathways involving a xenobiotic compound, a compound foreign to living organisms. Used of chemical compounds, e.g. a xenobiotic chemical, such as a pesticide.
cellular component
    GO:0005794    Golgi apparatus    A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions.
    GO:0009986    cell surface    The external part of the cell wall and/or plasma membrane.
    GO:0005737    cytoplasm    All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
    GO:0005769    early endosome    A membrane-bounded organelle that receives incoming material from primary endocytic vesicles that have been generated by clathrin-dependent and clathrin-independent endocytosis; vesicles fuse with the early endosome to deliver cargo for sorting into recycling or degradation pathways.
    GO:0005783    endoplasmic reticulum    The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached).
    GO:0016021    integral component of membrane    The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
    GO:0016020    membrane    A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
    GO:0005902    microvillus    Thin cylindrical membrane-covered projections on the surface of an animal cell containing a core bundle of actin filaments. Present in especially large numbers on the absorptive surface of intestinal cells.
    GO:0005886    plasma membrane    The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.

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  AOC3_HUMAN | Q16853
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

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        AOC3_HUMAN | Q16853: 1pu4 1us1 2c10 2y73 2y74 3ala 4btw 4btx 4bty

(-) Related Entries Specified in the PDB File

1pu4 CRYSTAL STRUCTURE OF HUMAN VASCULAR ADHESION PROTEIN-1
1us1 CRYSTAL STRUCTURE OF HUMAN VASCULAR ADHESION PROTEIN-1
2c10 THE STRUCTURE OF A TRUNCATED, SOLUBLE VERSION OF SEMICARBAZIDE-SENSITIVE AMINE OXIDASE
2y73 THE NATIVE STRUCTURES OF SOLUBLE HUMAN PRIMARY AMINE OXIDASE AOC3
2y74 THE CRYSTAL STRUCTURE OF HUMAN SOLUBLE PRIMARY AMINE OXIDASE AOC3 IN THE OFF-COPPER CONFORMATION