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Asymmetric Unit (Jmol Viewer)

Asym. Unit - sites (Jmol Viewer)

Biological Unit 1 (Jmol Viewer)

Biol. Unit 1 - sites (Jmol Viewer)

Biological Unit 2 (Jmol Viewer)

Title :   THE STRUCTURE OF A TRUNCATED, SOLUBLE VERSION OF SEMICARBAZIDE-SENSITIVE AMINE OXIDASE

Authors :   E. Jakobsson, G. J. Kleywegt

Date :   09 Sep 05 (Deposition) - 20 Sep 06 (Release) - 13 Jul 11 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   2.50

Chains :   Asym. Unit : A,B,C,D
Biol. Unit 1: A,B  (1x)
Biol. Unit 2: C,D  (1x)

Keywords :   Semicarbazide-Sensitive Amine Oxidase, Vascular Adhesion, Protein-1, Ssao, Vap-1, Cell Adhesion, Glycoprotein, Metal- Binding, Oxidoreductase, Signal- Anchor, Tpq, Transmembrane (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   E. Jakobsson, J. Nilsson, D. Ogg, G. J. Kleywegt
Structure Of Human Semicarbazide-Sensitive Amine Oxidase/Vascular Adhesion Protein-1.
Acta Crystallogr. , Sect. D V. 61 1550 2005
PubMed-ID: 16239734 | Reference-DOI: 10.1107/S0907444905028805

Molecule 1 - MEMBRANE COPPER AMINE OXIDASE
	Chains	:	A, B, C, D
	EC Number	:	1.4.3.6
	Engineered	:	YES
	Expression System Cell Line	:	HEK293
	Fragment	:	EXTRA-CELLULAR DOMAIN, RESIDUES 29-763
	Organism Common	:	HUMAN
	Organism Scientific	:	HOMO SAPIENS
	Organism Taxid	:	9606
	Synonym	:	SEMICARBAZIDE-SENSITIVE AMINE OXIDASE, VASCULAR ADHESION PROTEIN 1, VAP-1, HPAO

		1	2	3	4
Asymmetric Unit	:	A	B	C	D
Biological Unit 1 (1x)	:	A	B
Biological Unit 2 (1x)	:			C	D

Summary Information (see also Sequences/Alignments below)

Asymmetric Unit (9, 69)

No.	Name	Count	Type	Full Name
1	BMA	6	Ligand/Ion	BETA-D-MANNOSE
2	CA	8	Ligand/Ion	CALCIUM ION
3	CL	8	Ligand/Ion	CHLORIDE ION
4	CU	4	Ligand/Ion	COPPER (II) ION
5	FUL	4	Ligand/Ion	BETA-L-FUCOSE
6	MAN	3	Ligand/Ion	ALPHA-D-MANNOSE
7	NAG	28	Ligand/Ion	N-ACETYL-D-GLUCOSAMINE
8	NDG	4	Ligand/Ion	2-(ACETYLAMINO)-2-DEOXY-A-D-GLUCOPYRANOSE
9	TPQ	4	Mod. Amino Acid	5-(2-CARBOXY-2-AMINOETHYL)-2-HYDROXY-1,4-BENZOQUINONE

Biological Unit 1 (6, 24)

No.	Name	Count	Type	Full Name
1	BMA	3	Ligand/Ion	BETA-D-MANNOSE
2	CA	-1	Ligand/Ion	CALCIUM ION
3	CL	-1	Ligand/Ion	CHLORIDE ION
4	CU	-1	Ligand/Ion	COPPER (II) ION
5	FUL	2	Ligand/Ion	BETA-L-FUCOSE
6	MAN	1	Ligand/Ion	ALPHA-D-MANNOSE
7	NAG	14	Ligand/Ion	N-ACETYL-D-GLUCOSAMINE
8	NDG	2	Ligand/Ion	2-(ACETYLAMINO)-2-DEOXY-A-D-GLUCOPYRANOSE
9	TPQ	2	Mod. Amino Acid	5-(2-CARBOXY-2-AMINOETHYL)-2-HYDROXY-1,4-BENZOQUINONE

Biological Unit 2 (6, 25)

No.	Name	Count	Type	Full Name
1	BMA	3	Ligand/Ion	BETA-D-MANNOSE
2	CA	-1	Ligand/Ion	CALCIUM ION
3	CL	-1	Ligand/Ion	CHLORIDE ION
4	CU	-1	Ligand/Ion	COPPER (II) ION
5	FUL	2	Ligand/Ion	BETA-L-FUCOSE
6	MAN	2	Ligand/Ion	ALPHA-D-MANNOSE
7	NAG	14	Ligand/Ion	N-ACETYL-D-GLUCOSAMINE
8	NDG	2	Ligand/Ion	2-(ACETYLAMINO)-2-DEOXY-A-D-GLUCOPYRANOSE
9	TPQ	2	Mod. Amino Acid	5-(2-CARBOXY-2-AMINOETHYL)-2-HYDROXY-1,4-BENZOQUINONE

Asymmetric Unit (62, 62)

No.	Name	Evidence	Residues	Description
01	AC1	SOFTWARE	PHE A:130 , GLN A:133 , ASN A:137 , SER A:139 , VAL A:157 , NAG A:1763 , HOH A:2020	BINDING SITE FOR RESIDUE NAG A1762
02	AC2	SOFTWARE	MET A:152 , NAG A:1762 , BMA A:1769	BINDING SITE FOR RESIDUE NAG A1763
03	AC3	SOFTWARE	NAG A:1763	BINDING SITE FOR RESIDUE BMA A1769
04	AC4	SOFTWARE	ASN A:592 , NAG A:1765 , FUL A:1766 , HOH A:2051	BINDING SITE FOR RESIDUE NDG A1764
05	AC5	SOFTWARE	NDG A:1764	BINDING SITE FOR RESIDUE NAG A1765
06	AC6	SOFTWARE	GLU A:282 , NDG A:1764	BINDING SITE FOR RESIDUE FUL A1766
07	AC7	SOFTWARE	ARG A:206 , VAL A:209 , ASN A:232 , NAG A:1770 , TYR B:448	BINDING SITE FOR RESIDUE NAG A1767
08	AC8	SOFTWARE	NAG A:1767 , HIS B:450	BINDING SITE FOR RESIDUE NAG A1770
09	AC9	SOFTWARE	ASN A:294 , THR A:296 , HOH A:2141	BINDING SITE FOR RESIDUE NAG A1768
10	BC1	SOFTWARE	PHE B:130 , GLN B:133 , ASN B:137 , SER B:139 , NAG B:1763 , HOH B:2014	BINDING SITE FOR RESIDUE NAG B1762
11	BC2	SOFTWARE	NAG B:1762 , BMA B:1769	BINDING SITE FOR RESIDUE NAG B1763
12	BC3	SOFTWARE	NAG B:1763	BINDING SITE FOR RESIDUE BMA B1769
13	BC4	SOFTWARE	ASN B:592 , NAG B:1765 , FUL B:1766 , HOH B:2137 , HOH B:2138	BINDING SITE FOR RESIDUE NDG B1764
14	BC5	SOFTWARE	NDG B:1764 , FUL B:1766 , BMA B:1772 , NAG B:1773	BINDING SITE FOR RESIDUE NAG B1765
15	BC6	SOFTWARE	GLU B:282 , NDG B:1764 , NAG B:1765	BINDING SITE FOR RESIDUE FUL B1766
16	BC7	SOFTWARE	NAG B:1765 , NAG B:1773 , MAN B:1774	BINDING SITE FOR RESIDUE BMA B1772
17	BC8	SOFTWARE	HIS B:203 , BMA B:1772	BINDING SITE FOR RESIDUE MAN B1774
18	BC9	SOFTWARE	TYR A:448 , SER A:449 , ARG B:206 , ASN B:232 , SER B:234 , NAG B:1771	BINDING SITE FOR RESIDUE NAG B1767
19	CC1	SOFTWARE	HIS A:450 , ASP A:728 , NAG B:1767	BINDING SITE FOR RESIDUE NAG B1771
20	CC2	SOFTWARE	ASN B:294	BINDING SITE FOR RESIDUE NAG B1768
21	CC3	SOFTWARE	ASN B:666	BINDING SITE FOR RESIDUE NAG B1770
22	CC4	SOFTWARE	NAG B:1765 , BMA B:1772 , HOH B:2139 , GLU D:536 , LYS D:672	BINDING SITE FOR RESIDUE NAG B1773
23	CC5	SOFTWARE	GLN C:133 , ASN C:137 , SER C:139 , VAL C:157 , NAG C:1763	BINDING SITE FOR RESIDUE NAG C1762
24	CC6	SOFTWARE	MET C:152 , ASP C:154 , NAG C:1762 , BMA C:1769	BINDING SITE FOR RESIDUE NAG C1763
25	CC7	SOFTWARE	NAG C:1763	BINDING SITE FOR RESIDUE BMA C1769
26	CC8	SOFTWARE	GLY C:284 , ASN C:592 , NAG C:1765 , FUL C:1766	BINDING SITE FOR RESIDUE NDG C1764
27	CC9	SOFTWARE	NDG C:1764	BINDING SITE FOR RESIDUE NAG C1765
28	DC1	SOFTWARE	GLU C:282 , NDG C:1764	BINDING SITE FOR RESIDUE FUL C1766
29	DC2	SOFTWARE	ASN C:232 , SER C:234 , NAG C:1770 , HOH C:2140 , TYR D:448 , SER D:449	BINDING SITE FOR RESIDUE NAG C1767
30	DC3	SOFTWARE	NAG C:1767 , HIS D:450 , ASP D:728	BINDING SITE FOR RESIDUE NAG C1770
31	DC4	SOFTWARE	ASN C:294	BINDING SITE FOR RESIDUE NAG C1768
32	DC5	SOFTWARE	PHE D:130 , GLN D:133 , ASN D:137 , SER D:139 , VAL D:157 , NAG D:1763	BINDING SITE FOR RESIDUE NAG D1762
33	DC6	SOFTWARE	NAG D:1762 , BMA D:1769	BINDING SITE FOR RESIDUE NAG D1763
34	DC7	SOFTWARE	NAG D:1763 , MAN D:1773	BINDING SITE FOR RESIDUE BMA D1769
35	DC8	SOFTWARE	BMA D:1769	BINDING SITE FOR RESIDUE MAN D1773
36	DC9	SOFTWARE	ASN D:592 , NAG D:1765 , FUL D:1766 , HOH D:2039 , HOH D:2136 , HOH D:2137	BINDING SITE FOR RESIDUE NDG D1764
37	EC1	SOFTWARE	NDG D:1764 , BMA D:1772 , NAG D:1774	BINDING SITE FOR RESIDUE NAG D1765
38	EC2	SOFTWARE	GLU D:282 , NDG D:1764	BINDING SITE FOR RESIDUE FUL D1766
39	EC3	SOFTWARE	NAG D:1765 , NAG D:1774 , MAN D:1775 , HOH D:2140	BINDING SITE FOR RESIDUE BMA D1772
40	EC4	SOFTWARE	BMA D:1772	BINDING SITE FOR RESIDUE MAN D1775
41	EC5	SOFTWARE	TYR C:448 , ARG D:206 , ASN D:232 , SER D:234 , NAG D:1771	BINDING SITE FOR RESIDUE NAG D1767
42	EC6	SOFTWARE	HIS C:450 , ARG C:726 , NAG D:1767 , HOH D:2139	BINDING SITE FOR RESIDUE NAG D1771
43	EC7	SOFTWARE	ASN D:294	BINDING SITE FOR RESIDUE NAG D1768
44	EC8	SOFTWARE	ASN D:666 , HOH D:2138	BINDING SITE FOR RESIDUE NAG D1770
45	EC9	SOFTWARE	GLU B:536 , NAG D:1765 , BMA D:1772 , HOH D:2142	BINDING SITE FOR RESIDUE NAG D1774
46	FC1	SOFTWARE	ASP A:529 , LEU A:530 , ASP A:531 , ASP A:673 , LEU A:674 , HOH A:2105	BINDING SITE FOR RESIDUE CA A1771
47	FC2	SOFTWARE	HIS A:520 , HIS A:522 , HIS A:684 , HOH A:2089	BINDING SITE FOR RESIDUE CU A1772
48	FC3	SOFTWARE	GLU A:572 , PHE A:663 , ASN A:665 , GLU A:667 , HOH A:2125	BINDING SITE FOR RESIDUE CA A1773
49	FC4	SOFTWARE	ARG A:383 , GLN B:560	BINDING SITE FOR RESIDUE CL A1774
50	FC5	SOFTWARE	ASP B:529 , LEU B:530 , ASP B:531 , ASP B:673 , LEU B:674 , HOH B:2095	BINDING SITE FOR RESIDUE CA B1775
51	FC6	SOFTWARE	HIS B:520 , HIS B:522 , HIS B:684 , HOH B:2079	BINDING SITE FOR RESIDUE CU B1776
52	FC7	SOFTWARE	GLU B:572 , PHE B:663 , ASN B:665 , GLU B:667 , HOH B:2117 , HOH B:2120	BINDING SITE FOR RESIDUE CA B1777
53	FC8	SOFTWARE	GLN A:560 , ARG B:383	BINDING SITE FOR RESIDUE CL B1778
54	FC9	SOFTWARE	ASP C:529 , LEU C:530 , ASP C:531 , ASP C:673 , LEU C:674 , HOH C:2121	BINDING SITE FOR RESIDUE CA C1771
55	GC1	SOFTWARE	HIS C:520 , HIS C:522 , HIS C:684 , HOH C:2078	BINDING SITE FOR RESIDUE CU C1772
56	GC2	SOFTWARE	GLU C:572 , PHE C:663 , ASN C:665 , GLU C:667	BINDING SITE FOR RESIDUE CA C1773
57	GC3	SOFTWARE	ARG C:383 , GLN D:560	BINDING SITE FOR RESIDUE CL C1774
58	GC4	SOFTWARE	LYS C:252	BINDING SITE FOR RESIDUE CL C1775
59	GC5	SOFTWARE	ASP D:529 , LEU D:530 , ASP D:531 , ASP D:673 , LEU D:674 , HOH D:2092	BINDING SITE FOR RESIDUE CA D1776
60	GC6	SOFTWARE	HIS D:520 , HIS D:522 , HIS D:684 , HOH D:2068	BINDING SITE FOR RESIDUE CU D1777
61	GC7	SOFTWARE	GLU D:572 , PHE D:663 , ASN D:665 , GLU D:667 , HOH D:2113 , HOH D:2114	BINDING SITE FOR RESIDUE CA D1778
62	GC8	SOFTWARE	GLN C:560 , ARG D:383	BINDING SITE FOR RESIDUE CL D1779

Asymmetric Unit

No.	Residues
1	A:41	-	A:748
2	A:198	-	A:199
3	A:404	-	A:430
4	A:734	-	A:741
5	B:41	-	B:748
6	B:198	-	B:199
7	B:404	-	B:430
8	B:734	-	B:741
9	C:41	-	C:748
10	C:198	-	C:199
11	C:404	-	C:430
12	C:734	-	C:741
13	D:41	-	D:748
14	D:198	-	D:199
15	D:404	-	D:430
16	D:734	-	D:741

Asymmetric Unit

No.	Residues
1	Gly A:144	-	Pro A:145
2	Leu A:146	-	Pro A:147
3	Ala A:214	-	Pro A:215
4	Ile A:691	-	Pro A:692
5	Gly B:144	-	Pro B:145
6	Leu B:146	-	Pro B:147
7	Ala B:214	-	Pro B:215
8	Ile B:691	-	Pro B:692
9	Gly C:144	-	Pro C:145
10	Leu C:146	-	Pro C:147
11	Ala C:214	-	Pro C:215
12	Ile C:691	-	Pro C:692
13	Gly D:144	-	Pro D:145
14	Leu D:146	-	Pro D:147
15	Ala D:214	-	Pro D:215
16	Ile D:691	-	Pro D:692

Asymmetric Unit (13, 52)

								dbSNP	PDB
No.	Source	Variant ID	Variant			UniProt ID	Status	ID	Chain	Variant
01	UniProt	VAR_052603	R	78	Q	AOC3_HUMAN	Polymorphism	402680	A/B/C/D	R	78	Q
02	UniProt	VAR_025027	H	167	Y	AOC3_HUMAN	Polymorphism	2228470	A/B/C/D	H	167	Y
03	UniProt	VAR_052604	V	171	M	AOC3_HUMAN	Polymorphism	408038	A/B/C/D	V	171	M
04	UniProt	VAR_052605	H	203	R	AOC3_HUMAN	Polymorphism	630079	A/B/C/D	H	203	R
05	UniProt	VAR_012064	Y	317	H	AOC3_HUMAN	Polymorphism	438287	A/B/C/D	Y	317	H
06	UniProt	VAR_024343	R	329	Q	AOC3_HUMAN	Polymorphism	2229595	A/B/C/D	R	329	Q
07	UniProt	VAR_025028	I	371	T	AOC3_HUMAN	Polymorphism	35097308	A/B/C/D	I	371	T
08	UniProt	VAR_025029	A	408	S	AOC3_HUMAN	Polymorphism	35643019	A/B/C/D	A	408	S
09	UniProt	VAR_025030	R	426	H	AOC3_HUMAN	Polymorphism	33986943	A/B/C/D	R	426	H
10	UniProt	VAR_025031	R	441	W	AOC3_HUMAN	Polymorphism	2229596	A/B/C/D	R	441	W
11	UniProt	VAR_025032	A	582	T	AOC3_HUMAN	Polymorphism	34987927	A/B/C/D	A	582	T
12	UniProt	VAR_025033	G	700	S	AOC3_HUMAN	Polymorphism	477207	A/B/C/D	G	700	S
13	UniProt	VAR_025034	A	749	V	AOC3_HUMAN	Polymorphism	34012919	A/B/C/D	A	749	V

SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)

Biological Unit 1 (13, 26)

								dbSNP	PDB
No.	Source	Variant ID	Variant			UniProt ID	Status	ID	Chain	Variant
01	UniProt	VAR_052603	R	78	Q	AOC3_HUMAN	Polymorphism	402680	A/B	R	78	Q
02	UniProt	VAR_025027	H	167	Y	AOC3_HUMAN	Polymorphism	2228470	A/B	H	167	Y
03	UniProt	VAR_052604	V	171	M	AOC3_HUMAN	Polymorphism	408038	A/B	V	171	M
04	UniProt	VAR_052605	H	203	R	AOC3_HUMAN	Polymorphism	630079	A/B	H	203	R
05	UniProt	VAR_012064	Y	317	H	AOC3_HUMAN	Polymorphism	438287	A/B	Y	317	H
06	UniProt	VAR_024343	R	329	Q	AOC3_HUMAN	Polymorphism	2229595	A/B	R	329	Q
07	UniProt	VAR_025028	I	371	T	AOC3_HUMAN	Polymorphism	35097308	A/B	I	371	T
08	UniProt	VAR_025029	A	408	S	AOC3_HUMAN	Polymorphism	35643019	A/B	A	408	S
09	UniProt	VAR_025030	R	426	H	AOC3_HUMAN	Polymorphism	33986943	A/B	R	426	H
10	UniProt	VAR_025031	R	441	W	AOC3_HUMAN	Polymorphism	2229596	A/B	R	441	W
11	UniProt	VAR_025032	A	582	T	AOC3_HUMAN	Polymorphism	34987927	A/B	A	582	T
12	UniProt	VAR_025033	G	700	S	AOC3_HUMAN	Polymorphism	477207	A/B	G	700	S
13	UniProt	VAR_025034	A	749	V	AOC3_HUMAN	Polymorphism	34012919	A/B	A	749	V

SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)

Biological Unit 2 (13, 26)

								dbSNP	PDB
No.	Source	Variant ID	Variant			UniProt ID	Status	ID	Chain	Variant
01	UniProt	VAR_052603	R	78	Q	AOC3_HUMAN	Polymorphism	402680	C/D	R	78	Q
02	UniProt	VAR_025027	H	167	Y	AOC3_HUMAN	Polymorphism	2228470	C/D	H	167	Y
03	UniProt	VAR_052604	V	171	M	AOC3_HUMAN	Polymorphism	408038	C/D	V	171	M
04	UniProt	VAR_052605	H	203	R	AOC3_HUMAN	Polymorphism	630079	C/D	H	203	R
05	UniProt	VAR_012064	Y	317	H	AOC3_HUMAN	Polymorphism	438287	C/D	Y	317	H
06	UniProt	VAR_024343	R	329	Q	AOC3_HUMAN	Polymorphism	2229595	C/D	R	329	Q
07	UniProt	VAR_025028	I	371	T	AOC3_HUMAN	Polymorphism	35097308	C/D	I	371	T
08	UniProt	VAR_025029	A	408	S	AOC3_HUMAN	Polymorphism	35643019	C/D	A	408	S
09	UniProt	VAR_025030	R	426	H	AOC3_HUMAN	Polymorphism	33986943	C/D	R	426	H
10	UniProt	VAR_025031	R	441	W	AOC3_HUMAN	Polymorphism	2229596	C/D	R	441	W
11	UniProt	VAR_025032	A	582	T	AOC3_HUMAN	Polymorphism	34987927	C/D	A	582	T
12	UniProt	VAR_025033	G	700	S	AOC3_HUMAN	Polymorphism	477207	C/D	G	700	S
13	UniProt	VAR_025034	A	749	V	AOC3_HUMAN	Polymorphism	34012919	C/D	A	749	V

SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)

Asymmetric Unit (2, 8)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	COPPER_AMINE_OXID_1	PS01164	Copper amine oxidase topaquinone signature.	AOC3_HUMAN	460-473	4	A:460-473 B:460-473 C:460-473 D:460-473
2	COPPER_AMINE_OXID_2	PS01165	Copper amine oxidase copper-binding site signature.	AOC3_HUMAN	679-692	4	A:679-692 B:679-692 C:679-692 D:679-692

Biological Unit 1 (2, 4)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	COPPER_AMINE_OXID_1	PS01164	Copper amine oxidase topaquinone signature.	AOC3_HUMAN	460-473	2	A:460-473 B:460-473 - -
2	COPPER_AMINE_OXID_2	PS01165	Copper amine oxidase copper-binding site signature.	AOC3_HUMAN	679-692	2	A:679-692 B:679-692 - -

Biological Unit 2 (2, 4)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	COPPER_AMINE_OXID_1	PS01164	Copper amine oxidase topaquinone signature.	AOC3_HUMAN	460-473	2	- - C:460-473 D:460-473
2	COPPER_AMINE_OXID_2	PS01165	Copper amine oxidase copper-binding site signature.	AOC3_HUMAN	679-692	2	- - C:679-692 D:679-692

Asymmetric Unit (4, 16)

	ENSEMBL					UniProtKB			PDB
No.	Transcript ID	Exon	Exon ID	Genome Location	Length	ID	Location	Length	Count	Location	Length
1.1	ENST00000308423	1	ENSE00001213814	chr17:41003201-41004960	1760	AOC3_HUMAN	1-534	534	4	A:41-534 (gaps) B:39-534 (gaps) C:41-534 (gaps) D:39-534 (gaps)	494 496 494 496
1.2	ENST00000308423	2	ENSE00000899074	chr17:41006465-41006750	286	AOC3_HUMAN	534-629	96	4	A:534-629 B:534-629 C:534-629 D:534-629	96 96 96 96
1.3	ENST00000308423	3	ENSE00001213800	chr17:41007461-41007590	130	AOC3_HUMAN	629-672	44	4	A:629-672 B:629-672 C:629-672 D:629-672	44 44 44 44
1.4	ENST00000308423	4	ENSE00001178316	chr17:41008292-41010138	1847	AOC3_HUMAN	673-763	91	4	A:673-762 B:673-762 C:673-762 D:673-762	90 90 90 90

Asymmetric Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
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Chain A from PDB  Type:PROTEIN  Length:706
 aligned with AOC3_HUMAN | Q16853 from UniProtKB/Swiss-Prot  Length:763

    Alignment length:722
                                    50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530       540       550       560       570       580       590       600       610       620       630       640       650       660       670       680       690       700       710       720       730       740       750       760  
           AOC3_HUMAN    41 CPSVSPSAQPWTHPGQSQLFADLSREELTAVMRFLTQRLGPGLVDAAQARPSDNCVFSVELQLPPKAAALAHLDRGSPPPAREALAIVFFGRQPQPNVSELVVGPLPHPSYMRDVTVERHGGPLPYHRRPVLFQEYLDIDQMIFNRELPQASGLLHHCCFYKHRGRNLVTMTTAPRGLQSGDRATWFGLYYNISGAGFFLHHVGLELLVNHKALDPARWTIQKVFYQGRYYDSLAQLEAQFEAGLVNVVLIPDNGTGGSWSLKSPVPPGPAPPLQFYPQGPRFSVQGSRVASSLWTFSFGLGAFSGPRIFDVRFQGERLVYEISLQEALAIYGGNSPAAMTTRYVDGGFGMGKYTTPLTRGVDCPYLATYVDWHFLLESQAPKTIRDAFCVFEQNQGLPLRRHHSDLYSHYFGGLAETVLVVRSMSTLLNYDYVWDTVFHPSGAIEIRFYATGYISSAFLFGATGKYGNQVSEHTLGTVHTHSAHFKVDLDVAGLENWVWAEDMVFVPMAVPWSPEHQLQRLQVTRKLLEMEEQAAFLVGSATPRYLYLASNHSNKWGHPRGYRIQMLSFAGEPLPQNSSMARGFSWERYQLAVTQRKEEEPSSSSVFNQNDPWAPTVDFSDFINNETIAGKDLVAWVTAGFLHIPHAEDIPNTVTVGNGVGFFLRPYNFFDEDPSFYSADSIYFRGDQDAGACEVNPLACLPQAAACAPDLPAFSHGGFSH 762
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains 2                c10A01 A:41-165  [code=3.10.450.40, no name defined]                                                        2c10A02 A:166-297  [code=3.10.450.40, no name defined]                                                                              ------------------------2c10A03 A:322-728 Copper amine oxidase, Domain 3                                                                                                                                                                                                                                                                                                                                                                       ---------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .----------------......hhhhhhhhhhhhhhhh.....hhhhh....eeeeeeeee..hhhhhhhhhhhh......eeeeeeee......eeeeeeee......eeeehhhhhhh..ee.hhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhh.......eeee............eeeeeeee.....hhhh.eeeeeeeee....hhhhheeeeeee..eee.hhhhhhhhhhh..............................eee...........................................................hhhhhh.....hhh...................eeeeeeeee.....eeeeeeeeeeeeeeeeeeeeeee.....eeeeeeeeeeeeeeeeee............................eee........eeeee..eeee.....................................................hhhhh............................................hhhhhhhh..............................hhhhhh......................hhhhh......................hhhhhh.....................hhhhhh................ Sec.struct. author
                 SAPs(SNPs) -------------------------------------Q----------------------------------------------------------------------------------------Y---M-------------------------------R-----------------------------------------------------------------------------------------------------------------H-----------Q-----------------------------------------T------------------------------------S-----------------H--------------W--------------------------------------------------------------------------------------------------------------------------------------------T---------------------------------------------------------------------------------------------------------------------S------------------------------------------------V------------- SAPs(SNPs)
                    PROSITE -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------COPPER_AMINE_O-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------COPPER_AMINE_O---------------------------------------------------------------------- PROSITE
           Transcript 1 (1) Exon 1.1  PDB: A:41-534 (gaps) UniProt: 1-534 [INCOMPLETE]                                                                                                                                                                                                                                                                                                                                                                                                                                                    ----------------------------------------------------------------------------------------------Exon 1.3  PDB: A:629-672 UniProt: 629-672   Exon 1.4  PDB: A:673-762 UniProt: 673-763 [INCOMPLETE]                                     Transcript 1 (1)
           Transcript 1 (2) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------Exon 1.2  PDB: A:534-629 UniProt: 534-629                                                       ------------------------------------------------------------------------------------------------------------------------------------- Transcript 1 (2)
                 2c10 A  41 C----------------QLFADLSREELTAVMRFLTQRLGPGLVDAAQARPSDNCVFSVELQLPPKAAALAHLDRGSPPPAREALAIVFFGRQPQPNVSELVVGPLPHPSYMRDVTVERHGGPLPYHRRPVLFQEYLDIDQMIFNRELPQASGLLHHCCFYKHRGRNLVTMTTAPRGLQSGDRATWFGLYYNISGAGFFLHHVGLELLVNHKALDPARWTIQKVFYQGRYYDSLAQLEAQFEAGLVNVVLIPDNGTGGSWSLKSPVPPGPAPPLQFYPQGPRFSVQGSRVASSLWTFSFGLGAFSGPRIFDVRFQGERLVYEISLQEALAIYGGNSPAAMTTRYVDGGFGMGKYTTPLTRGVDCPYLATYVDWHFLLESQAPKTIRDAFCVFEQNQGLPLRRHHSDLYSHYFGGLAETVLVVRSMSTLLNyDYVWDTVFHPSGAIEIRFYATGYISSAFLFGATGKYGNQVSEHTLGTVHTHSAHFKVDLDVAGLENWVWAEDMVFVPMAVPWSPEHQLQRLQVTRKLLEMEEQAAFLVGSATPRYLYLASNHSNKWGHPRGYRIQMLSFAGEPLPQNSSMARGFSWERYQLAVTQRKEEEPSSSSVFNQNDPWAPTVDFSDFINNETIAGKDLVAWVTAGFLHIPHAEDIPNTVTVGNGVGFFLRPYNFFDEDPSFYSADSIYFRGDQDAGACEVNPLACLPQAAACAPDLPAFSHGGFSH 762
                            |        -       |60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470|      480       490       500       510       520       530       540       550       560       570       580       590       600       610       620       630       640       650       660       670       680       690       700       710       720       730       740       750       760  
                            |               58                                                                                                                                                                                                                                                                                                                                                                                                                          471-TPQ                                                                                                                                                                                                                                                                                               
                           41

Chain B from PDB  Type:PROTEIN  Length:709
 aligned with AOC3_HUMAN | Q16853 from UniProtKB/Swiss-Prot  Length:763

    Alignment length:724
                                    48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248       258       268       278       288       298       308       318       328       338       348       358       368       378       388       398       408       418       428       438       448       458       468       478       488       498       508       518       528       538       548       558       568       578       588       598       608       618       628       638       648       658       668       678       688       698       708       718       728       738       748       758    
           AOC3_HUMAN    39 PHCPSVSPSAQPWTHPGQSQLFADLSREELTAVMRFLTQRLGPGLVDAAQARPSDNCVFSVELQLPPKAAALAHLDRGSPPPAREALAIVFFGRQPQPNVSELVVGPLPHPSYMRDVTVERHGGPLPYHRRPVLFQEYLDIDQMIFNRELPQASGLLHHCCFYKHRGRNLVTMTTAPRGLQSGDRATWFGLYYNISGAGFFLHHVGLELLVNHKALDPARWTIQKVFYQGRYYDSLAQLEAQFEAGLVNVVLIPDNGTGGSWSLKSPVPPGPAPPLQFYPQGPRFSVQGSRVASSLWTFSFGLGAFSGPRIFDVRFQGERLVYEISLQEALAIYGGNSPAAMTTRYVDGGFGMGKYTTPLTRGVDCPYLATYVDWHFLLESQAPKTIRDAFCVFEQNQGLPLRRHHSDLYSHYFGGLAETVLVVRSMSTLLNYDYVWDTVFHPSGAIEIRFYATGYISSAFLFGATGKYGNQVSEHTLGTVHTHSAHFKVDLDVAGLENWVWAEDMVFVPMAVPWSPEHQLQRLQVTRKLLEMEEQAAFLVGSATPRYLYLASNHSNKWGHPRGYRIQMLSFAGEPLPQNSSMARGFSWERYQLAVTQRKEEEPSSSSVFNQNDPWAPTVDFSDFINNETIAGKDLVAWVTAGFLHIPHAEDIPNTVTVGNGVGFFLRPYNFFDEDPSFYSADSIYFRGDQDAGACEVNPLACLPQAAACAPDLPAFSHGGFSH 762
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains 2c10               B01 B:39-165  [code=3.10.450.40, no name defined]                                                           2c10B02 B:166-297  [code=3.10.450.40, no name defined]                                                                              ------------------------2c10B03 B:322-728 Copper amine oxidase, Domain 3                                                                                                                                                                                                                                                                                                                                                                       ---------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....---------------......hhhhhhhhhhhhhhhh.....hhhhh....eeeeeeeee..hhhhhhhhhhhh.....eeeeeeeee......eeeeeeeeee....eeeehhhhhhh..ee.hhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhh.......eeee............eeeeeeee.....hhhh.eeeeeeeee....hhhhheeeeeee..eee.hhhhhhhhhhh..............................eee...........................................................hhhhhh.....hhh...................eeeeeeeee.....eeeeeeeeeeeeeeeeeeeeeee.....eeeeeeeeeeeeeeeeee............................eee........eeeee..eeee.....................................................hhh..............................................hhhhhhhh..............................hhhhhh......................hhhhh......................hhhhhh........................................... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------Q----------------------------------------------------------------------------------------Y---M-------------------------------R-----------------------------------------------------------------------------------------------------------------H-----------Q-----------------------------------------T------------------------------------S-----------------H--------------W--------------------------------------------------------------------------------------------------------------------------------------------T---------------------------------------------------------------------------------------------------------------------S------------------------------------------------V------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------COPPER_AMINE_O-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------COPPER_AMINE_O---------------------------------------------------------------------- PROSITE
           Transcript 1 (1) Exon 1.1  PDB: B:39-534 (gaps) UniProt: 1-534 [INCOMPLETE]                                                                                                                                                                                                                                                                                                                                                                                                                                                      ----------------------------------------------------------------------------------------------Exon 1.3  PDB: B:629-672 UniProt: 629-672   Exon 1.4  PDB: B:673-762 UniProt: 673-763 [INCOMPLETE]                                     Transcript 1 (1)
           Transcript 1 (2) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------Exon 1.2  PDB: B:534-629 UniProt: 534-629                                                       ------------------------------------------------------------------------------------------------------------------------------------- Transcript 1 (2)
                 2c10 B  39 PHCP---------------QLFADLSREELTAVMRFLTQRLGPGLVDAAQARPSDNCVFSVELQLPPKAAALAHLDRGSPPPAREALAIVFFGRQPQPNVSELVVGPLPHPSYMRDVTVERHGGPLPYHRRPVLFQEYLDIDQMIFNRELPQASGLLHHCCFYKHRGRNLVTMTTAPRGLQSGDRATWFGLYYNISGAGFFLHHVGLELLVNHKALDPARWTIQKVFYQGRYYDSLAQLEAQFEAGLVNVVLIPDNGTGGSWSLKSPVPPGPAPPLQFYPQGPRFSVQGSRVASSLWTFSFGLGAFSGPRIFDVRFQGERLVYEISLQEALAIYGGNSPAAMTTRYVDGGFGMGKYTTPLTRGVDCPYLATYVDWHFLLESQAPKTIRDAFCVFEQNQGLPLRRHHSDLYSHYFGGLAETVLVVRSMSTLLNyDYVWDTVFHPSGAIEIRFYATGYISSAFLFGATGKYGNQVSEHTLGTVHTHSAHFKVDLDVAGLENWVWAEDMVFVPMAVPWSPEHQLQRLQVTRKLLEMEEQAAFLVGSATPRYLYLASNHSNKWGHPRGYRIQMLSFAGEPLPQNSSMARGFSWERYQLAVTQRKEEEPSSSSVFNQNDPWAPTVDFSDFINNETIAGKDLVAWVTAGFLHIPHAEDIPNTVTVGNGVGFFLRPYNFFDEDPSFYSADSIYFRGDQDAGACEVNPLACLPQAAACAPDLPAFSHGGFSH 762
                               |     -        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248       258       268       278       288       298       308       318       328       338       348       358       368       378       388       398       408       418       428       438       448       458       468  |    478       488       498       508       518       528       538       548       558       568       578       588       598       608       618       628       638       648       658       668       678       688       698       708       718       728       738       748       758    
                              42              58                                                                                                                                                                                                                                                                                                                                                                                                                          471-TPQ

Chain C from PDB  Type:PROTEIN  Length:706
 aligned with AOC3_HUMAN | Q16853 from UniProtKB/Swiss-Prot  Length:763

    Alignment length:722
                                    50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530       540       550       560       570       580       590       600       610       620       630       640       650       660       670       680       690       700       710       720       730       740       750       760  
           AOC3_HUMAN    41 CPSVSPSAQPWTHPGQSQLFADLSREELTAVMRFLTQRLGPGLVDAAQARPSDNCVFSVELQLPPKAAALAHLDRGSPPPAREALAIVFFGRQPQPNVSELVVGPLPHPSYMRDVTVERHGGPLPYHRRPVLFQEYLDIDQMIFNRELPQASGLLHHCCFYKHRGRNLVTMTTAPRGLQSGDRATWFGLYYNISGAGFFLHHVGLELLVNHKALDPARWTIQKVFYQGRYYDSLAQLEAQFEAGLVNVVLIPDNGTGGSWSLKSPVPPGPAPPLQFYPQGPRFSVQGSRVASSLWTFSFGLGAFSGPRIFDVRFQGERLVYEISLQEALAIYGGNSPAAMTTRYVDGGFGMGKYTTPLTRGVDCPYLATYVDWHFLLESQAPKTIRDAFCVFEQNQGLPLRRHHSDLYSHYFGGLAETVLVVRSMSTLLNYDYVWDTVFHPSGAIEIRFYATGYISSAFLFGATGKYGNQVSEHTLGTVHTHSAHFKVDLDVAGLENWVWAEDMVFVPMAVPWSPEHQLQRLQVTRKLLEMEEQAAFLVGSATPRYLYLASNHSNKWGHPRGYRIQMLSFAGEPLPQNSSMARGFSWERYQLAVTQRKEEEPSSSSVFNQNDPWAPTVDFSDFINNETIAGKDLVAWVTAGFLHIPHAEDIPNTVTVGNGVGFFLRPYNFFDEDPSFYSADSIYFRGDQDAGACEVNPLACLPQAAACAPDLPAFSHGGFSH 762
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains 2                c10C01 C:41-165  [code=3.10.450.40, no name defined]                                                        2c10C02 C:166-297  [code=3.10.450.40, no name defined]                                                                              ------------------------2c10C03 C:322-728 Copper amine oxidase, Domain 3                                                                                                                                                                                                                                                                                                                                                                       ---------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .----------------......hhhhhhhhhhhhhhhh.....hhhhh....eeeeeeeee..hhhhhhhhhhh.......eeeeeeee......eeeeeeee......eeeehhhhhhh..ee.hhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhh........eeee............eeeeeeee.....hhhh.eeeeeeeee....hhhhheeeeeee..eee.hhhhhhhhhhh..............................eee...........................................................hhhhhh.....hhh...................eeeeeeeee.....eeeeeeeeeeeeeeeeeeeeeee.....eeeeeeeeeeeeeeeeee............................eee........eeeee..eeee.....................................................hhhhh............................................hhhhhhhh..............................hhhhhh......................hhhhh......................hhhhhh.....................hhhhhh................ Sec.struct. author
                 SAPs(SNPs) -------------------------------------Q----------------------------------------------------------------------------------------Y---M-------------------------------R-----------------------------------------------------------------------------------------------------------------H-----------Q-----------------------------------------T------------------------------------S-----------------H--------------W--------------------------------------------------------------------------------------------------------------------------------------------T---------------------------------------------------------------------------------------------------------------------S------------------------------------------------V------------- SAPs(SNPs)
                    PROSITE -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------COPPER_AMINE_O-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------COPPER_AMINE_O---------------------------------------------------------------------- PROSITE
           Transcript 1 (1) Exon 1.1  PDB: C:41-534 (gaps) UniProt: 1-534 [INCOMPLETE]                                                                                                                                                                                                                                                                                                                                                                                                                                                    ----------------------------------------------------------------------------------------------Exon 1.3  PDB: C:629-672 UniProt: 629-672   Exon 1.4  PDB: C:673-762 UniProt: 673-763 [INCOMPLETE]                                     Transcript 1 (1)
           Transcript 1 (2) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------Exon 1.2  PDB: C:534-629 UniProt: 534-629                                                       ------------------------------------------------------------------------------------------------------------------------------------- Transcript 1 (2)
                 2c10 C  41 C----------------QLFADLSREELTAVMRFLTQRLGPGLVDAAQARPSDNCVFSVELQLPPKAAALAHLDRGSPPPAREALAIVFFGRQPQPNVSELVVGPLPHPSYMRDVTVERHGGPLPYHRRPVLFQEYLDIDQMIFNRELPQASGLLHHCCFYKHRGRNLVTMTTAPRGLQSGDRATWFGLYYNISGAGFFLHHVGLELLVNHKALDPARWTIQKVFYQGRYYDSLAQLEAQFEAGLVNVVLIPDNGTGGSWSLKSPVPPGPAPPLQFYPQGPRFSVQGSRVASSLWTFSFGLGAFSGPRIFDVRFQGERLVYEISLQEALAIYGGNSPAAMTTRYVDGGFGMGKYTTPLTRGVDCPYLATYVDWHFLLESQAPKTIRDAFCVFEQNQGLPLRRHHSDLYSHYFGGLAETVLVVRSMSTLLNyDYVWDTVFHPSGAIEIRFYATGYISSAFLFGATGKYGNQVSEHTLGTVHTHSAHFKVDLDVAGLENWVWAEDMVFVPMAVPWSPEHQLQRLQVTRKLLEMEEQAAFLVGSATPRYLYLASNHSNKWGHPRGYRIQMLSFAGEPLPQNSSMARGFSWERYQLAVTQRKEEEPSSSSVFNQNDPWAPTVDFSDFINNETIAGKDLVAWVTAGFLHIPHAEDIPNTVTVGNGVGFFLRPYNFFDEDPSFYSADSIYFRGDQDAGACEVNPLACLPQAAACAPDLPAFSHGGFSH 762
                            |        -       |60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470|      480       490       500       510       520       530       540       550       560       570       580       590       600       610       620       630       640       650       660       670       680       690       700       710       720       730       740       750       760  
                           41               58                                                                                                                                                                                                                                                                                                                                                                                                                          471-TPQ

Chain D from PDB  Type:PROTEIN  Length:709
 aligned with AOC3_HUMAN | Q16853 from UniProtKB/Swiss-Prot  Length:763

    Alignment length:724
                                    48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248       258       268       278       288       298       308       318       328       338       348       358       368       378       388       398       408       418       428       438       448       458       468       478       488       498       508       518       528       538       548       558       568       578       588       598       608       618       628       638       648       658       668       678       688       698       708       718       728       738       748       758    
           AOC3_HUMAN    39 PHCPSVSPSAQPWTHPGQSQLFADLSREELTAVMRFLTQRLGPGLVDAAQARPSDNCVFSVELQLPPKAAALAHLDRGSPPPAREALAIVFFGRQPQPNVSELVVGPLPHPSYMRDVTVERHGGPLPYHRRPVLFQEYLDIDQMIFNRELPQASGLLHHCCFYKHRGRNLVTMTTAPRGLQSGDRATWFGLYYNISGAGFFLHHVGLELLVNHKALDPARWTIQKVFYQGRYYDSLAQLEAQFEAGLVNVVLIPDNGTGGSWSLKSPVPPGPAPPLQFYPQGPRFSVQGSRVASSLWTFSFGLGAFSGPRIFDVRFQGERLVYEISLQEALAIYGGNSPAAMTTRYVDGGFGMGKYTTPLTRGVDCPYLATYVDWHFLLESQAPKTIRDAFCVFEQNQGLPLRRHHSDLYSHYFGGLAETVLVVRSMSTLLNYDYVWDTVFHPSGAIEIRFYATGYISSAFLFGATGKYGNQVSEHTLGTVHTHSAHFKVDLDVAGLENWVWAEDMVFVPMAVPWSPEHQLQRLQVTRKLLEMEEQAAFLVGSATPRYLYLASNHSNKWGHPRGYRIQMLSFAGEPLPQNSSMARGFSWERYQLAVTQRKEEEPSSSSVFNQNDPWAPTVDFSDFINNETIAGKDLVAWVTAGFLHIPHAEDIPNTVTVGNGVGFFLRPYNFFDEDPSFYSADSIYFRGDQDAGACEVNPLACLPQAAACAPDLPAFSHGGFSH 762
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains 2c10               D01 D:39-165  [code=3.10.450.40, no name defined]                                                           2c10D02 D:166-297  [code=3.10.450.40, no name defined]                                                                              ------------------------2c10D03 D:322-728 Copper amine oxidase, Domain 3                                                                                                                                                                                                                                                                                                                                                                       ---------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....---------------......hhhhhhhhhhhhhhhh.....hhhhh...............hhhhhhhhhhhh....................eeeeeeee......eeeehhhhhhh..ee.hhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhh........eeee............eeeeeeee.....hhhh.eeeeeeeee....hhhhheeeeeee..eee.hhhhhhhhhhhh.............................eee......eeee..eeee..eeeeeeee...eeeeeeeee..eeeeeeeeeeeeeeee...hhhhhh.eee.hhh.............................................................eeeeeeeeeeeeeeeeee............................eee........eeeee..eeee.................eeeeeeeeeeeeeeee..eeeeeeeeeeeeeeee..hhh.eee..........................................hhhhhhhh.eeeeeee......................hhhhhh.......eeeeeeeeeeeee..hhhhh......................hhhhhh...eeee.................................... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------Q----------------------------------------------------------------------------------------Y---M-------------------------------R-----------------------------------------------------------------------------------------------------------------H-----------Q-----------------------------------------T------------------------------------S-----------------H--------------W--------------------------------------------------------------------------------------------------------------------------------------------T---------------------------------------------------------------------------------------------------------------------S------------------------------------------------V------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------COPPER_AMINE_O-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------COPPER_AMINE_O---------------------------------------------------------------------- PROSITE
           Transcript 1 (1) Exon 1.1  PDB: D:39-534 (gaps) UniProt: 1-534 [INCOMPLETE]                                                                                                                                                                                                                                                                                                                                                                                                                                                      ----------------------------------------------------------------------------------------------Exon 1.3  PDB: D:629-672 UniProt: 629-672   Exon 1.4  PDB: D:673-762 UniProt: 673-763 [INCOMPLETE]                                     Transcript 1 (1)
           Transcript 1 (2) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------Exon 1.2  PDB: D:534-629 UniProt: 534-629                                                       ------------------------------------------------------------------------------------------------------------------------------------- Transcript 1 (2)
                 2c10 D  39 PHCP---------------QLFADLSREELTAVMRFLTQRLGPGLVDAAQARPSDNCVFSVELQLPPKAAALAHLDRGSPPPAREALAIVFFGRQPQPNVSELVVGPLPHPSYMRDVTVERHGGPLPYHRRPVLFQEYLDIDQMIFNRELPQASGLLHHCCFYKHRGRNLVTMTTAPRGLQSGDRATWFGLYYNISGAGFFLHHVGLELLVNHKALDPARWTIQKVFYQGRYYDSLAQLEAQFEAGLVNVVLIPDNGTGGSWSLKSPVPPGPAPPLQFYPQGPRFSVQGSRVASSLWTFSFGLGAFSGPRIFDVRFQGERLVYEISLQEALAIYGGNSPAAMTTRYVDGGFGMGKYTTPLTRGVDCPYLATYVDWHFLLESQAPKTIRDAFCVFEQNQGLPLRRHHSDLYSHYFGGLAETVLVVRSMSTLLNyDYVWDTVFHPSGAIEIRFYATGYISSAFLFGATGKYGNQVSEHTLGTVHTHSAHFKVDLDVAGLENWVWAEDMVFVPMAVPWSPEHQLQRLQVTRKLLEMEEQAAFLVGSATPRYLYLASNHSNKWGHPRGYRIQMLSFAGEPLPQNSSMARGFSWERYQLAVTQRKEEEPSSSSVFNQNDPWAPTVDFSDFINNETIAGKDLVAWVTAGFLHIPHAEDIPNTVTVGNGVGFFLRPYNFFDEDPSFYSADSIYFRGDQDAGACEVNPLACLPQAAACAPDLPAFSHGGFSH 762
                               |     -        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248       258       268       278       288       298       308       318       328       338       348       358       368       378       388       398       408       418       428       438       448       458       468  |    478       488       498       508       518       528       538       548       558       568       578       588       598       608       618       628       638       648       658       668       678       688       698       708       718       728       738       748       758    
                              42              58                                                                                                                                                                                                                                                                                                                                                                                                                          471-TPQ

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

(no "SCOP Domain" information available for 2C10)

Asymmetric Unit

Classes(

)

Architectures( (-)

)

Topologies( (-)

)

Homologous Superfamilies( (-)

)

Organisms( (-)

)

Class: Alpha Beta (26913)

Architecture: Roll (3276)

Topology: Nuclear Transport Factor 2; Chain: A, (517)

Homologous Superfamily: [code=3.10.450.40, no name defined] (77)

Human (Homo sapiens) (8)

1a	2c10A01	A:41-165
1b	2c10D01	D:39-165
1c	2c10A02	A:166-297
1d	2c10B02	B:166-297
1e	2c10C02	C:166-297
1f	2c10D02	D:166-297
1g	2c10C01	C:41-165
1h	2c10B01	B:39-165

Class: Mainly Beta (13760)

Architecture: Distorted Sandwich (506)

Topology: Beta-galactosidase; Chain A, domain 5 (250)

Homologous Superfamily: Copper amine oxidase, Domain 3 (74)

Human (Homo sapiens) (8)

2a	2c10A03	A:322-728
2b	2c10D03	D:322-728
2c	2c10B03	B:322-728
2d	2c10C03	C:322-728

(no "Pfam Domain" information available for 2C10)

Asymmetric Unit(hide GO term definitions)

Chain A,B,C,D (AOC3_HUMAN | Q16853)

molecular function
	GO:0052595	aliphatic-amine oxidase activity	Catalysis of the reaction: an aliphatic amine + H2O + O2 = an aldehyde + NH3 + hydrogen peroxide + H+.
	GO:0052594	aminoacetone:oxygen oxidoreductase(deaminating) activity	Catalysis of the reaction: aminoacetone + H2O + O2 = methylglyoxal + NH3 + hydrogen peroxide + H+.
	GO:0005509	calcium ion binding	Interacting selectively and non-covalently with calcium ions (Ca2+).
	GO:0005507	copper ion binding	Interacting selectively and non-covalently with copper (Cu) ions.
	GO:0046872	metal ion binding	Interacting selectively and non-covalently with any metal ion.
	GO:0016491	oxidoreductase activity	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
	GO:0052596	phenethylamine:oxygen oxidoreductase (deaminating) activity	Catalysis of the reaction: phenylethylamine + O2 + H2O = phenylacetaldehyde + NH3 + hydrogen peroxide + H+.
	GO:0008131	primary amine oxidase activity	Catalysis of the reaction: a primary amine + H2O + O2 = an aldehyde + NH3 + hydrogen peroxide.
	GO:0005515	protein binding	Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
	GO:0046982	protein heterodimerization activity	Interacting selectively and non-covalently with a nonidentical protein to form a heterodimer.
	GO:0042803	protein homodimerization activity	Interacting selectively and non-covalently with an identical protein to form a homodimer.
	GO:0048038	quinone binding	Interacting selectively and non-covalently with a quinone, any member of a class of diketones derivable from aromatic compounds by conversion of two CH groups into CO groups with any necessary rearrangement of double bonds.
	GO:0052593	tryptamine:oxygen oxidoreductase (deaminating) activity	Catalysis of the reaction: tryptamine + H2O + O2 = NH3 + indole acetaldehyde + hydrogen peroxide + H+.
biological process
	GO:0009308	amine metabolic process	The chemical reactions and pathways involving any organic compound that is weakly basic in character and contains an amino or a substituted amino group. Amines are called primary, secondary, or tertiary according to whether one, two, or three carbon atoms are attached to the nitrogen atom.
	GO:0007155	cell adhesion	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules.
	GO:0006954	inflammatory response	The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages.
	GO:0055114	oxidation-reduction process	A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
	GO:0046677	response to antibiotic	Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an antibiotic stimulus. An antibiotic is a chemical substance produced by a microorganism which has the capacity to inhibit the growth of or to kill other microorganisms.
	GO:0006805	xenobiotic metabolic process	The chemical reactions and pathways involving a xenobiotic compound, a compound foreign to living organisms. Used of chemical compounds, e.g. a xenobiotic chemical, such as a pesticide.
cellular component
	GO:0005794	Golgi apparatus	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions.
	GO:0009986	cell surface	The external part of the cell wall and/or plasma membrane.
	GO:0005737	cytoplasm	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
	GO:0005769	early endosome	A membrane-bounded organelle that receives incoming material from primary endocytic vesicles that have been generated by clathrin-dependent and clathrin-independent endocytosis; vesicles fuse with the early endosome to deliver cargo for sorting into recycling or degradation pathways.
	GO:0005783	endoplasmic reticulum	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached).
	GO:0016021	integral component of membrane	The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
	GO:0016020	membrane	A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
	GO:0005902	microvillus	Thin cylindrical membrane-covered projections on the surface of an animal cell containing a core bundle of actin filaments. Present in especially large numbers on the absorptive surface of intestinal cells.
	GO:0005886	plasma membrane	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.

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	Cis Peptide Bonds
		Ala A:214 - Pro A:215	[ RasMol ]
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	AOC3_HUMAN \| Q16853	:	1pu4 1us1 2c11 2y73 2y74 3ala 4btw 4btx 4bty

1pu4	CRYSTAL STRUCTURE OF HUMAN VASCULAR ADHESION PROTEIN-1
1us1	CRYSTAL STRUCTURE OF HUMAN VASCULAR ADHESION PROTEIN-1
2c11	CRYSTAL STRUCTURE OF THE 2-HYDRAZINOPYRIDINE OF SEMICARBAZIDE-SENSITIVE AMINE OXIDASE

Description

Compounds

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (9, 69)

Sites (62, 62)

SS Bonds (16, 16)

Cis Peptide Bonds (16, 16)

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SAPs(SNPs)/Variants (13, 52)

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Exons (4, 16)

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