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(-) Description

Title :  STRUCTURE OF THE UHM DOMAIN OF PUF60 FUSED TO THIOREDOXIN
 
Authors :  L. Corsini, M. Hothorn, K. Scheffzek, G. Stier, M. Sattler
Date :  24 Jul 08  (Deposition) - 28 Oct 08  (Release) - 09 Jan 13  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.20
Chains :  Asym. Unit :  A,B,C,D,E,F,G,H
Biol. Unit 1:  A,F  (1x)
Biol. Unit 2:  B,D  (1x)
Biol. Unit 3:  C,G  (1x)
Biol. Unit 4:  E,H  (1x)
Biol. Unit 5:  A,B,C,D,E,F,G,H  (1x)
Keywords :  Splicing, Fbp Interacting Repressor, Uhm, Rrm, Electron Transport, Redox-Active Center, Transport, Transcription (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  L. Corsini, M. Hothorn, G. Stier, V. Rybin, K. Scheffzek, T. J. Gibson, M. Sattler
Dimerization And Protein Binding Specificity Of The U2Af Homology Motif Of The Splicing Factor Puf60.
J. Biol. Chem. V. 284 630 2009
PubMed-ID: 18974054  |  Reference-DOI: 10.1074/JBC.M805395200
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - THIOREDOXIN N-TERMINALLY FUSED TO PUF60(UHM)
    ChainsA, B, C, D, E, F, G, H
    EngineeredYES
    Expression SystemESCHERICHIA COLI
    Expression System PlasmidPET9D
    Expression System StrainK12
    Expression System Taxid562
    Expression System Vector TypePLASMID
    FragmentCHIMERA OF THIOREDOXIN 1-109 AND PUF60 C-TERMINAL 460-559
    GeneTRXA, Z5291, ECS4714
    Organism Taxid83334

 Structural Features

(-) Chains, Units

  12345678
Asymmetric Unit ABCDEFGH
Biological Unit 1 (1x)A    F  
Biological Unit 2 (1x) B D    
Biological Unit 3 (1x)  C   G 
Biological Unit 4 (1x)    E  H
Biological Unit 5 (1x)ABCDEFGH

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 5)

Asymmetric Unit (2, 5)
No.NameCountTypeFull Name
1CL4Ligand/IonCHLORIDE ION
2EDO1Ligand/Ion1,2-ETHANEDIOL
Biological Unit 1 (0, 0)
No.NameCountTypeFull Name
1CL-1Ligand/IonCHLORIDE ION
2EDO-1Ligand/Ion1,2-ETHANEDIOL
Biological Unit 2 (0, 0)
No.NameCountTypeFull Name
1CL-1Ligand/IonCHLORIDE ION
2EDO-1Ligand/Ion1,2-ETHANEDIOL
Biological Unit 3 (0, 0)
No.NameCountTypeFull Name
1CL-1Ligand/IonCHLORIDE ION
2EDO-1Ligand/Ion1,2-ETHANEDIOL
Biological Unit 4 (1, 1)
No.NameCountTypeFull Name
1CL-1Ligand/IonCHLORIDE ION
2EDO1Ligand/Ion1,2-ETHANEDIOL
Biological Unit 5 (1, 1)
No.NameCountTypeFull Name
1CL-1Ligand/IonCHLORIDE ION
2EDO1Ligand/Ion1,2-ETHANEDIOL

(-) Sites  (2, 2)

Asymmetric Unit (2, 2)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREHIS A:350 , TRP A:372 , HOH A:695BINDING SITE FOR RESIDUE CL A 1
2AC2SOFTWAREARG E:464 , TYR E:544 , ASP E:545 , ALA E:556 , HOH E:672BINDING SITE FOR RESIDUE EDO E 557

(-) SS Bonds  (8, 8)

Asymmetric Unit
No.Residues
1A:376 -A:379
2B:376 -B:379
3C:376 -C:379
4D:376 -D:379
5E:376 -E:379
6F:376 -F:379
7G:376 -G:379
8H:376 -H:379

(-) Cis Peptide Bonds  (11, 11)

Asymmetric Unit
No.Residues
1Ile A:419 -Pro A:420
2Ile B:419 -Pro B:420
3Ala B:506 -Glu B:507
4Ile C:419 -Pro C:420
5Pro D:343 -Met D:344
6Ile D:419 -Pro D:420
7Ile E:419 -Pro E:420
8Ile F:419 -Pro F:420
9Asp G:346 -Lys G:347
10Ile G:419 -Pro G:420
11Ile H:419 -Pro H:420

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (1, 8)

Asymmetric Unit (1, 8)
  dbSNPPDB
No.SourceVariant IDVariantUniProt IDStatusIDChainVariant
1UniProtVAR_070939H169YPUF60_HUMANDisease (VRJS)398123001A/B/C/D/E/F/G/HA363Y

  SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)
Biological Unit 1 (1, 2)
  dbSNPPDB
No.SourceVariant IDVariantUniProt IDStatusIDChainVariant
1UniProtVAR_070939H169YPUF60_HUMANDisease (VRJS)398123001A/FA363Y

  SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)
Biological Unit 2 (1, 2)
  dbSNPPDB
No.SourceVariant IDVariantUniProt IDStatusIDChainVariant
1UniProtVAR_070939H169YPUF60_HUMANDisease (VRJS)398123001B/DA363Y

  SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)
Biological Unit 3 (1, 2)
  dbSNPPDB
No.SourceVariant IDVariantUniProt IDStatusIDChainVariant
1UniProtVAR_070939H169YPUF60_HUMANDisease (VRJS)398123001C/GA363Y

  SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)
Biological Unit 4 (1, 2)
  dbSNPPDB
No.SourceVariant IDVariantUniProt IDStatusIDChainVariant
1UniProtVAR_070939H169YPUF60_HUMANDisease (VRJS)398123001E/HA363Y

  SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)
Biological Unit 5 (1, 8)
  dbSNPPDB
No.SourceVariant IDVariantUniProt IDStatusIDChainVariant
1UniProtVAR_070939H169YPUF60_HUMANDisease (VRJS)398123001A/B/C/D/E/F/G/HA363Y

  SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)

(-) PROSITE Motifs  (3, 29)

Asymmetric Unit (3, 29)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1THIOREDOXIN_2PS51352 Thioredoxin domain profile.THIO_ECO571-109
 
  2A:344-452
D:344-452
2THIOREDOXIN_1PS00194 Thioredoxin family active site.THIO_ECO5725-43
 
 
 
 
 
 
 
  8A:368-386
B:368-386
C:368-386
D:368-386
E:368-386
F:368-386
G:368-386
H:368-386
3RRMPS50102 Eukaryotic RNA Recognition Motif (RRM) profile.PUF60_HUMAN129-207
 
 
226-304
 
 
 
 
 
 
 
462-549
 
 
 
 
 
 
 
  19A:346-378
D:346-378
E:353-378
A:395-428
B:395-428
C:395-428
D:395-428
E:395-428
F:395-428
G:395-428
H:395-428
A:459-546
B:459-546
C:459-546
D:459-546
E:459-546
F:459-546
G:459-546
H:459-546
Biological Unit 1 (3, 8)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1THIOREDOXIN_2PS51352 Thioredoxin domain profile.THIO_ECO571-109
 
  1A:344-452
-
2THIOREDOXIN_1PS00194 Thioredoxin family active site.THIO_ECO5725-43
 
 
 
 
 
 
 
  2A:368-386
-
-
-
-
F:368-386
-
-
3RRMPS50102 Eukaryotic RNA Recognition Motif (RRM) profile.PUF60_HUMAN129-207
 
 
226-304
 
 
 
 
 
 
 
462-549
 
 
 
 
 
 
 
  5A:346-378
-
-
A:395-428
-
-
-
-
F:395-428
-
-
A:459-546
-
-
-
-
F:459-546
-
-
Biological Unit 2 (3, 8)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1THIOREDOXIN_2PS51352 Thioredoxin domain profile.THIO_ECO571-109
 
  1-
D:344-452
2THIOREDOXIN_1PS00194 Thioredoxin family active site.THIO_ECO5725-43
 
 
 
 
 
 
 
  2-
B:368-386
-
D:368-386
-
-
-
-
3RRMPS50102 Eukaryotic RNA Recognition Motif (RRM) profile.PUF60_HUMAN129-207
 
 
226-304
 
 
 
 
 
 
 
462-549
 
 
 
 
 
 
 
  5-
D:346-378
-
-
B:395-428
-
D:395-428
-
-
-
-
-
B:459-546
-
D:459-546
-
-
-
-
Biological Unit 3 (2, 6)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1THIOREDOXIN_2PS51352 Thioredoxin domain profile.THIO_ECO571-109
 
  0-
-
2THIOREDOXIN_1PS00194 Thioredoxin family active site.THIO_ECO5725-43
 
 
 
 
 
 
 
  2-
-
C:368-386
-
-
-
G:368-386
-
3RRMPS50102 Eukaryotic RNA Recognition Motif (RRM) profile.PUF60_HUMAN129-207
 
 
226-304
 
 
 
 
 
 
 
462-549
 
 
 
 
 
 
 
  4-
-
-
-
-
C:395-428
-
-
-
G:395-428
-
-
-
C:459-546
-
-
-
G:459-546
-
Biological Unit 4 (2, 7)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1THIOREDOXIN_2PS51352 Thioredoxin domain profile.THIO_ECO571-109
 
  0-
-
2THIOREDOXIN_1PS00194 Thioredoxin family active site.THIO_ECO5725-43
 
 
 
 
 
 
 
  2-
-
-
-
E:368-386
-
-
H:368-386
3RRMPS50102 Eukaryotic RNA Recognition Motif (RRM) profile.PUF60_HUMAN129-207
 
 
226-304
 
 
 
 
 
 
 
462-549
 
 
 
 
 
 
 
  5-
-
E:353-378
-
-
-
-
E:395-428
-
-
H:395-428
-
-
-
-
E:459-546
-
-
H:459-546
Biological Unit 5 (3, 29)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1THIOREDOXIN_2PS51352 Thioredoxin domain profile.THIO_ECO571-109
 
  2A:344-452
D:344-452
2THIOREDOXIN_1PS00194 Thioredoxin family active site.THIO_ECO5725-43
 
 
 
 
 
 
 
  8A:368-386
B:368-386
C:368-386
D:368-386
E:368-386
F:368-386
G:368-386
H:368-386
3RRMPS50102 Eukaryotic RNA Recognition Motif (RRM) profile.PUF60_HUMAN129-207
 
 
226-304
 
 
 
 
 
 
 
462-549
 
 
 
 
 
 
 
  19A:346-378
D:346-378
E:353-378
A:395-428
B:395-428
C:395-428
D:395-428
E:395-428
F:395-428
G:395-428
H:395-428
A:459-546
B:459-546
C:459-546
D:459-546
E:459-546
F:459-546
G:459-546
H:459-546

(-) Exons   (0, 0)

(no "Exon" information available for 3DXB)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it)
Chain A from PDB  Type:PROTEIN  Length:214
 aligned with PUF60_HUMAN | Q9UHX1 from UniProtKB/Swiss-Prot  Length:559

    Alignment length:450
                                   119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269       279       289       299       309       319       329       339       349       359       369       379       389       399       409       419       429       439       449       459       469       479       489       499       509       519       529       539       549       559
          PUF60_HUMAN   110 PLSPLQSMAAQRQRALAIMCRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQMNSVMLGGRNIKVGRPSNIGQAQPIIDQLAEEARAFNRIYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDAVSSMNLFDLGGQYLRVGKAVTPPMPLLTPATPGGLPPAAAVAAAAATAKITAQEAVAGAAVLGTLGTPGLVSPALTLAQPLGTLPQAVMAAQAPGVITGVTPARPPIPVTIPSVGVVNPILASPPTLGLLEPKKEKEEEELFPESERPEMLSEQEHMSISGSSARHMVMQKLLRKQESTVMVLRNMVDPKDIDDDLEGEVTEECGKFGAVNRVIIYQEKQGEEEDAEIIVKIFVEFSIASETHKAIQALNGRWFAGRKVVAEVYDQERFDNSDLSA 559
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ...------------------------------...---------ee....hhhhhhh....eeeeeee...hh---------------------hhhh--hhhhhhhhhhhh.--------------------------..eeeeeee......hhhhhh...----------..eeeeee..---------------------------------eeeeeee.----------------------..hhhh-----------------------------------------------------------------------hhhhhhhhh...------------.....eeeee...hhhhh..hhhhhhhhhhh....eeeeeeeeee........eeeeeeeee.hhhhhhhhhhhhh.........eeee.hhhhhhh..... Sec.struct. author
                 SAPs(SNPs) -----------------------------------------------------------Y------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE -------------------RRM  PDB: A:346-378 UniProt: 129-207                                           ------------------RRM  PDB: A:395-428 UniProt: 226-304                                           -------------------------------------------------------------------------------------------------------------------------------------------------------------RRM  PDB: A:459-546 UniProt: 462-549                                                    ---------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 3dxb A 343 PMS------------------------------DKI---------IHLTDDSFDTDVLKADGAILVDFWAEWCG---------------------PCKM--IAPILDEIADEYQ--------------------------GKLTVAKLNIDQNPGTAPKYGIRG----------IPTLLLFKNG---------------------------------EVAATKVG----------------------ALSKGQ-----------------------------------------------------------------------LKEFLDANLAGS------------AMESTVMVLRNMVDPKDIDDDLEGEVTEECGKFGAVNRVIIYQEKQGEEEDAEIIVKIFVEFSIASETHKAIQALNGRWFAGRKVVAEVYDQERFDNSDLSA 556
                              |      -         -         -   | |   -     | 353       363       373   |     -         -     |  |- |     390   |     -         -         -|      404       414   |     -    |  424   |     -         -         -       431    |    -         -       439  |      -         -         -         -         -         -         -    |  448     |   -       456       466       476       486       496       506       516       526       536       546       556
                              |                            346 |       349                         377                   378  |  |         394                        395                    418        419      428                               429    436                    437  442                                                                     443        454          455                                                                                                     
                            345                              348                                                            381  |                                                                                                                                                                                                                                                                                                                                                            
                                                                                                                               382                                                                                                                                                                                                                                                                                                                                                            

Chain A from PDB  Type:PROTEIN  Length:214
 aligned with THIO_ECO57 | P0AA27 from UniProtKB/Swiss-Prot  Length:109

    Alignment length:214
                             1                                                                                                         109                                                                                                        
                             |       9        19        29        39        49        59        69        79        89        99       109         -         -         -         -         -         -         -         -         -         -    
           THIO_ECO57     - -MSDKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLDANLA--------------------------------------------------------------------------------------------------------   -
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......ee....hhhhhhh....eeeeeee...hhhhhhhhhhhhhhhhhh...eeeeeee......hhhhhh.....eeeeee..eeeeeee...hhhhhhhhhhhhh........eeeee...hhhhh..hhhhhhhhhhh....eeeeeeeeee........eeeeeeeee.hhhhhhhhhhhhh.........eeee.hhhhhhh..... Sec.struct. author
                 SAPs(SNPs) --------------------Y------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (1) -THIOREDOXIN_2  PDB: A:344-452 UniProt: 1-109                                                                 -------------------------------------------------------------------------------------------------------- PROSITE (1)
                PROSITE (2) -------------------------THIOREDOXIN_1      -------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3dxb A 343 PMSDKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLDANLAGSAMESTVMVLRNMVDPKDIDDDLEGEVTEECGKFGAVNRVIIYQEKQGEEEDAEIIVKIFVEFSIASETHKAIQALNGRWFAGRKVVAEVYDQERFDNSDLSA 556
                                   352       362       372       382       392       402       412       422       432       442       452       462       472       482       492       502       512       522       532       542       552    

Chain B from PDB  Type:PROTEIN  Length:211
 aligned with PUF60_HUMAN | Q9UHX1 from UniProtKB/Swiss-Prot  Length:559

    Alignment length:417
                                   152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362       372       382       392       402       412       422       432       442       452       462       472       482       492       502       512       522       532       542       552       
          PUF60_HUMAN   143 DTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQMNSVMLGGRNIKVGRPSNIGQAQPIIDQLAEEARAFNRIYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDAVSSMNLFDLGGQYLRVGKAVTPPMPLLTPATPGGLPPAAAVAAAAATAKITAQEAVAGAAVLGTLGTPGLVSPALTLAQPLGTLPQAVMAAQAPGVITGVTPARPPIPVTIPSVGVVNPILASPPTLGLLEPKKEKEEEELFPESERPEMLSEQEHMSISGSSARHMVMQKLLRKQESTVMVLRNMVDPKDIDDDLEGEVTEECGKFGAVNRVIIYQEKQGEEEDAEIIVKIFVEFSIASETHKAIQALNGRWFAGRKVVAEVYDQERFDNSDLSA 559
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...---------ee....hhhhhh.....eeeeeee...hh---------------------hhhh--hhhhhhhhhhhh.--------------------------..eeeeeee......hhhhhh...----------..eeeeee..---------------------------------eeeeeee.----------------------..hhhh-----------------------------------------------------------------------hhhhhhhhh...------------.....eeeee...hhhhh..hhhhhhhhhhh....eeeeeeeeee........eeeeeeeee.hhhhhhhhhhhhh..ee..ee.eeee.hhhhhhh..... Sec.struct. author
                 SAPs(SNPs) --------------------------Y------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE RRM  PDB: - UniProt: 129-207                                     ------------------RRM  PDB: B:395-428 UniProt: 226-304                                           -------------------------------------------------------------------------------------------------------------------------------------------------------------RRM  PDB: B:459-546 UniProt: 462-549                                                    ---------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3dxb B 346 DKI---------IHLTDDSFDTDVLKADGAILVDFWAEWCG---------------------PCKM--IAPILDEIADEYQ--------------------------GKLTVAKLNIDQNPGTAPKYGIRG----------IPTLLLFKNG---------------------------------EVAATKVG----------------------ALSKGQ-----------------------------------------------------------------------LKEFLDANLAGS------------AMESTVMVLRNMVDPKDIDDDLEGEVTEECGKFGAVNRVIIYQEKQGEEEDAEIIVKIFVEFSIASETHKAIQALNGRWFAGRKVVAEVYDQERFDNSDLSA 556
                              |      -  |    356       366       376|        -         -  |  | 383       393|        -         -       397       407       417|        - |     427|        -         -         -    |  434 |       -         -    |  442         -         -         -         -         -         -         - |     451  |      -     | 459       469       479       489       499       509       519       529       539       549       
                            348       349                         377                   378  |  |         394                        395                    418        419      428                               429    436                    437  442                                                                     443        454          455                                                                                                     
                                                                                           381  |                                                                                                                                                                                                                                                                                                                                                            
                                                                                              382                                                                                                                                                                                                                                                                                                                                                            

Chain B from PDB  Type:PROTEIN  Length:211
 aligned with THIO_ECO57 | P0AA27 from UniProtKB/Swiss-Prot  Length:109

    Alignment length:211
                                                                                                                                    109                                                                                                        
                                    12        22        32        42        52        62        72        82        92       102      |  -         -         -         -         -         -         -         -         -         -         - 
           THIO_ECO57     3 DKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLDANLA--------------------------------------------------------------------------------------------------------   -
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...ee....hhhhhh.....eeeeeee...hhhhhhhhhhhhhhhhhh...eeeeeee......hhhhhh.....eeeeee..eeeeeee...hhhhhhhhhhhhh........eeeee...hhhhh..hhhhhhhhhhh....eeeeeeeeee........eeeeeeeee.hhhhhhhhhhhhh..ee..ee.eeee.hhhhhhh..... Sec.struct. author
                 SAPs(SNPs) -----------------Y------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (1) THIOREDOXIN_2  PDB: - UniProt: 1-109                                                                       -------------------------------------------------------------------------------------------------------- PROSITE (1)
                PROSITE (2) ----------------------THIOREDOXIN_1      -------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3dxb B 346 DKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLDANLAGSAMESTVMVLRNMVDPKDIDDDLEGEVTEECGKFGAVNRVIIYQEKQGEEEDAEIIVKIFVEFSIASETHKAIQALNGRWFAGRKVVAEVYDQERFDNSDLSA 556
                                   355       365       375       385       395       405       415       425       435       445       455       465       475       485       495       505       515       525       535       545       555 

Chain C from PDB  Type:PROTEIN  Length:211
 aligned with PUF60_HUMAN | Q9UHX1 from UniProtKB/Swiss-Prot  Length:559

    Alignment length:417
                                   152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362       372       382       392       402       412       422       432       442       452       462       472       482       492       502       512       522       532       542       552       
          PUF60_HUMAN   143 DTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQMNSVMLGGRNIKVGRPSNIGQAQPIIDQLAEEARAFNRIYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDAVSSMNLFDLGGQYLRVGKAVTPPMPLLTPATPGGLPPAAAVAAAAATAKITAQEAVAGAAVLGTLGTPGLVSPALTLAQPLGTLPQAVMAAQAPGVITGVTPARPPIPVTIPSVGVVNPILASPPTLGLLEPKKEKEEEELFPESERPEMLSEQEHMSISGSSARHMVMQKLLRKQESTVMVLRNMVDPKDIDDDLEGEVTEECGKFGAVNRVIIYQEKQGEEEDAEIIVKIFVEFSIASETHKAIQALNGRWFAGRKVVAEVYDQERFDNSDLSA 559
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...---------ee....hhhhhh.....eeeeeee...hh---------------------hhhh--hhhhhhhhhhhh.--------------------------..eeeeeee......hhhhhh...----------..eeeeee..---------------------------------eeeeeee.----------------------..hhhh-----------------------------------------------------------------------hhhhhhhhhh..------------.....eeeee...hhhhh..hhhhhhhhhhh....eeeeeeeeee........eeeeeeeee.hhhhhhhhhhhhh..ee..ee.eeee.hhhhhhh..... Sec.struct. author
                 SAPs(SNPs) --------------------------Y------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE RRM  PDB: - UniProt: 129-207                                     ------------------RRM  PDB: C:395-428 UniProt: 226-304                                           -------------------------------------------------------------------------------------------------------------------------------------------------------------RRM  PDB: C:459-546 UniProt: 462-549                                                    ---------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3dxb C 346 DKI---------IHLTDDSFDTDVLKADGAILVDFWAEWCG---------------------PCKM--IAPILDEIADEYQ--------------------------GKLTVAKLNIDQNPGTAPKYGIRG----------IPTLLLFKNG---------------------------------EVAATKVG----------------------ALSKGQ-----------------------------------------------------------------------LKEFLDANLAGS------------AMESTVMVLRNMVDPKDIDDDLEGEVTEECGKFGAVNRVIIYQEKQGEEEDAEIIVKIFVEFSIASETHKAIQALNGRWFAGRKVVAEVYDQERFDNSDLSA 556
                              |      -  |    356       366       376|        -         -  |  | 383       393|        -         -       397       407       417|        - |     427|        -         -         -    |  434 |       -         -    |  442         -         -         -         -         -         -         - |     451  |      -     | 459       469       479       489       499       509       519       529       539       549       
                            348       349                         377                   378  |  |         394                        395                    418        419      428                               429    436                    437  442                                                                     443        454          455                                                                                                     
                                                                                           381  |                                                                                                                                                                                                                                                                                                                                                            
                                                                                              382                                                                                                                                                                                                                                                                                                                                                            

Chain C from PDB  Type:PROTEIN  Length:211
 aligned with THIO_ECO57 | P0AA27 from UniProtKB/Swiss-Prot  Length:109

    Alignment length:211
                                                                                                                                    109                                                                                                        
                                    12        22        32        42        52        62        72        82        92       102      |  -         -         -         -         -         -         -         -         -         -         - 
           THIO_ECO57     3 DKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLDANLA--------------------------------------------------------------------------------------------------------   -
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...ee....hhhhhh.....eeeeeee...hhhhhhhhhhhhhhhhhh...eeeeeee......hhhhhh.....eeeeee..eeeeeee...hhhhhhhhhhhhhh.......eeeee...hhhhh..hhhhhhhhhhh....eeeeeeeeee........eeeeeeeee.hhhhhhhhhhhhh..ee..ee.eeee.hhhhhhh..... Sec.struct. author
                 SAPs(SNPs) -----------------Y------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (1) THIOREDOXIN_2  PDB: - UniProt: 1-109                                                                       -------------------------------------------------------------------------------------------------------- PROSITE (1)
                PROSITE (2) ----------------------THIOREDOXIN_1      -------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3dxb C 346 DKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLDANLAGSAMESTVMVLRNMVDPKDIDDDLEGEVTEECGKFGAVNRVIIYQEKQGEEEDAEIIVKIFVEFSIASETHKAIQALNGRWFAGRKVVAEVYDQERFDNSDLSA 556
                                   355       365       375       385       395       405       415       425       435       445       455       465       475       485       495       505       515       525       535       545       555 

Chain D from PDB  Type:PROTEIN  Length:216
 aligned with PUF60_HUMAN | Q9UHX1 from UniProtKB/Swiss-Prot  Length:559

    Alignment length:470
                                    99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269       279       289       299       309       319       329       339       349       359       369       379       389       399       409       419       429       439       449       459       469       479       489       499       509       519       529       539       549       559
          PUF60_HUMAN    90 HQQQQLTNLQMAAVTMGFGDPLSPLQSMAAQRQRALAIMCRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQMNSVMLGGRNIKVGRPSNIGQAQPIIDQLAEEARAFNRIYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDAVSSMNLFDLGGQYLRVGKAVTPPMPLLTPATPGGLPPAAAVAAAAATAKITAQEAVAGAAVLGTLGTPGLVSPALTLAQPLGTLPQAVMAAQAPGVITGVTPARPPIPVTIPSVGVVNPILASPPTLGLLEPKKEKEEEELFPESERPEMLSEQEHMSISGSSARHMVMQKLLRKQESTVMVLRNMVDPKDIDDDLEGEVTEECGKFGAVNRVIIYQEKQGEEEDAEIIVKIFVEFSIASETHKAIQALNGRWFAGRKVVAEVYDQERFDNSDLSA 559
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..------------------...------------------------------...---------ee....hhhhhh......eeeeee...hh---------------------hhhh--hhhhhhhhhhhh.--------------------------...eeeeee......hhhhhh...----------..eeeeee..---------------------------------eeeeeee.----------------------..hhhh-----------------------------------------------------------------------hhhhhhhhh...------------.....eeeee..........hhhhhhhhhhh....eeeeeeeeee........eeeeeeeee.hhhhhhhhhhhhh.........eeee.hhhhhhh..... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------Y------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ---------------------------------------RRM  PDB: D:346-378 UniProt: 129-207                                           ------------------RRM  PDB: D:395-428 UniProt: 226-304                                           -------------------------------------------------------------------------------------------------------------------------------------------------------------RRM  PDB: D:459-546 UniProt: 462-549                                                    ---------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3dxb D 341 HH------------------PMS------------------------------DKI---------IHLTDDSFDTDVLKADGAILVDFWAEWCG---------------------PCKM--IAPILDEIADEYQ--------------------------GKLTVAKLNIDQNPGTAPKYGIRG----------IPTLLLFKNG---------------------------------EVAATKVG----------------------ALSKGQ-----------------------------------------------------------------------LKEFLDANLAGS------------AMESTVMVLRNMVDPKDIDDDLEGEVTEECGKFGAVNRVIIYQEKQGEEEDAEIIVKIFVEFSIASETHKAIQALNGRWFAGRKVVAEVYDQERFDNSDLSA 556
                             |       -         -| |      -         -         -   | |   -     | 353       363       373   |     -         -     |  |- |     390   |     -         -         -|      404       414   |     -    |  424   |     -         -         -       431    |    -         -       439  |      -         -         -         -         -         -         -    |  448     |   -       456       466       476       486       496       506       516       526       536       546       556
                           342                343 |                            346 |       349                         377                   378  |  |         394                        395                    418        419      428                               429    436                    437  442                                                                     443        454          455                                                                                                     
                                                345                              348                                                            381  |                                                                                                                                                                                                                                                                                                                                                            
                                                                                                                                                   382                                                                                                                                                                                                                                                                                                                                                            

Chain D from PDB  Type:PROTEIN  Length:216
 aligned with THIO_ECO57 | P0AA27 from UniProtKB/Swiss-Prot  Length:109

    Alignment length:216
                               1                                                                                                         109                                                                                                        
                               |     7        17        27        37        47        57        67        77        87        97       107 |       -         -         -         -         -         -         -         -         -         -      
           THIO_ECO57     - ---MSDKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLDANLA--------------------------------------------------------------------------------------------------------   -
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ........ee....hhhhhh......eeeeee...hhhhhhhhhhhhhhhhhh....eeeeee......hhhhhh.....eeeeee..eeeeeee...hhhhhhhhhhhhh........eeeee..........hhhhhhhhhhh....eeeeeeeeee........eeeeeeeee.hhhhhhhhhhhhh.........eeee.hhhhhhh..... Sec.struct. author
                 SAPs(SNPs) ----------------------Y------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (1) ---THIOREDOXIN_2  PDB: D:344-452 UniProt: 1-109                                                                 -------------------------------------------------------------------------------------------------------- PROSITE (1)
                PROSITE (2) ---------------------------THIOREDOXIN_1      -------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 3dxb D 341 HHPMSDKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLDANLAGSAMESTVMVLRNMVDPKDIDDDLEGEVTEECGKFGAVNRVIIYQEKQGEEEDAEIIVKIFVEFSIASETHKAIQALNGRWFAGRKVVAEVYDQERFDNSDLSA 556
                                   350       360       370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530       540       550      

Chain E from PDB  Type:PROTEIN  Length:210
 aligned with PUF60_HUMAN | Q9UHX1 from UniProtKB/Swiss-Prot  Length:559

    Alignment length:473
                                    96       106       116       126       136       146       156       166       176       186       196       206       216       226       236       246       256       266       276       286       296       306       316       326       336       346       356       366       376       386       396       406       416       426       436       446       456       466       476       486       496       506       516       526       536       546       556   
          PUF60_HUMAN    87 TIAHQQQQLTNLQMAAVTMGFGDPLSPLQSMAAQRQRALAIMCRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQMNSVMLGGRNIKVGRPSNIGQAQPIIDQLAEEARAFNRIYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDAVSSMNLFDLGGQYLRVGKAVTPPMPLLTPATPGGLPPAAAVAAAAATAKITAQEAVAGAAVLGTLGTPGLVSPALTLAQPLGTLPQAVMAAQAPGVITGVTPARPPIPVTIPSVGVVNPILASPPTLGLLEPKKEKEEEELFPESERPEMLSEQEHMSISGSSARHMVMQKLLRKQESTVMVLRNMVDPKDIDDDLEGEVTEECGKFGAVNRVIIYQEKQGEEEDAEIIVKIFVEFSIASETHKAIQALNGRWFAGRKVVAEVYDQERFDNSDLSA 559
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..ee----..--------------------------------------------------------------..hhhhhh.....eeeeeee...hh---------------------hhhh--hhhhhhhhhhhh.--------------------------..eeeeeee......hhhhhh...----------..eeeeee..---------------------------------eeeeeee.----------------------..hhhh-----------------------------------------------------------------------hhhhhhhhhh..------------.....eeeee..........hhhhhhhhhhh....eeeeeeeeee........eeeeeeeee.hhhhhhhhhhhhh..ee..ee.eeee.hhhhhhh..... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------Y------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------RRM  PDB: E:353-378 UniProt: 129-207                                           ------------------RRM  PDB: E:395-428 UniProt: 226-304                                           -------------------------------------------------------------------------------------------------------------------------------------------------------------RRM  PDB: E:459-546 UniProt: 462-549                                                    ---------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3dxb E 347 KIIH----LT--------------------------------------------------------------DDSFDTDVLKADGAILVDFWAEWCG---------------------PCKM--IAPILDEIADEYQ--------------------------GKLTVAKLNIDQNPGTAPKYGIRG----------IPTLLLFKNG---------------------------------EVAATKVG----------------------ALSKGQ-----------------------------------------------------------------------LKEFLDANLAGS------------AMESTVMVLRNMVDPKDIDDDLEGEVTEECGKFGAVNRVIIYQEKQGEEEDAEIIVKIFVEFSIASETHKAIQALNGRWFAGRKVVAEVYDQERFDNSDLSA 556
                               |   352         -         -         -         -         -         -  |    360       370      |  -         -       379 |  |  387      |  -         -         -   |   401       411      |  -       421      |  -         -         -         -|      | -         -         -|    |   -         -         -         -         -         -         -       445        |-         - |     463       473       483       493       503       513       523       533       543       553   
                             350  351|                                                            353                     377                   378  |  |         394                        395                    418        419      428                               429    436                    437  442                                                                     443        454          455                                                                                                     
                                   352                                                                                                             381  |                                                                                                                                                                                                                                                                                                                                                            
                                                                                                                                                      382                                                                                                                                                                                                                                                                                                                                                            

Chain E from PDB  Type:PROTEIN  Length:210
 aligned with THIO_ECO57 | P0AA27 from UniProtKB/Swiss-Prot  Length:109

    Alignment length:210
                                                                                                                                   109                                                                                                        
                                    13        23        33        43        53        63        73        83        93       103     |   -         -         -         -         -         -         -         -         -         -         -
           THIO_ECO57     4 KIIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLDANLA--------------------------------------------------------------------------------------------------------   -
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ..ee....hhhhhh.....eeeeeee...hhhhhhhhhhhhhhhhhh...eeeeeee......hhhhhh.....eeeeee..eeeeeee...hhhhhhhhhhhhhh.......eeeee..........hhhhhhhhhhh....eeeeeeeeee........eeeeeeeee.hhhhhhhhhhhhh..ee..ee.eeee.hhhhhhh..... Sec.struct. author
                 SAPs(SNPs) ----------------Y------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (1) THIOREDOXIN_2  PDB: - UniProt: 1-109                                                                      -------------------------------------------------------------------------------------------------------- PROSITE (1)
                PROSITE (2) ---------------------THIOREDOXIN_1      -------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 3dxb E 347 KIIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLDANLAGSAMESTVMVLRNMVDPKDIDDDLEGEVTEECGKFGAVNRVIIYQEKQGEEEDAEIIVKIFVEFSIASETHKAIQALNGRWFAGRKVVAEVYDQERFDNSDLSA 556
                                   356       366       376       386       396       406       416       426       436       446       456       466       476       486       496       506       516       526       536       546       556

Chain F from PDB  Type:PROTEIN  Length:211
 aligned with PUF60_HUMAN | Q9UHX1 from UniProtKB/Swiss-Prot  Length:559

    Alignment length:417
                                   152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362       372       382       392       402       412       422       432       442       452       462       472       482       492       502       512       522       532       542       552       
          PUF60_HUMAN   143 DTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQMNSVMLGGRNIKVGRPSNIGQAQPIIDQLAEEARAFNRIYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDAVSSMNLFDLGGQYLRVGKAVTPPMPLLTPATPGGLPPAAAVAAAAATAKITAQEAVAGAAVLGTLGTPGLVSPALTLAQPLGTLPQAVMAAQAPGVITGVTPARPPIPVTIPSVGVVNPILASPPTLGLLEPKKEKEEEELFPESERPEMLSEQEHMSISGSSARHMVMQKLLRKQESTVMVLRNMVDPKDIDDDLEGEVTEECGKFGAVNRVIIYQEKQGEEEDAEIIVKIFVEFSIASETHKAIQALNGRWFAGRKVVAEVYDQERFDNSDLSA 559
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...---------ee....hhhhhh.....eeeeeee...hh---------------------hhhh--hhhhhhhhhhhh.--------------------------..eeeeeee......hhhhhh...----------..eeeeee..---------------------------------eeeeeee.----------------------..hhhh-----------------------------------------------------------------------hhhhhhhhh...------------.....eeeee...hhhhh..hhhhhhhhhhh....eeeeeeeeee........eeeeeeeee.hhhhhhhhhhhhh..ee..ee.eeee.hhhhhhh..... Sec.struct. author
                 SAPs(SNPs) --------------------------Y------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE RRM  PDB: - UniProt: 129-207                                     ------------------RRM  PDB: F:395-428 UniProt: 226-304                                           -------------------------------------------------------------------------------------------------------------------------------------------------------------RRM  PDB: F:459-546 UniProt: 462-549                                                    ---------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3dxb F 346 DKI---------IHLTDDSFDTDVLKADGAILVDFWAEWCG---------------------PCKM--IAPILDEIADEYQ--------------------------GKLTVAKLNIDQNPGTAPKYGIRG----------IPTLLLFKNG---------------------------------EVAATKVG----------------------ALSKGQ-----------------------------------------------------------------------LKEFLDANLAGS------------AMESTVMVLRNMVDPKDIDDDLEGEVTEECGKFGAVNRVIIYQEKQGEEEDAEIIVKIFVEFSIASETHKAIQALNGRWFAGRKVVAEVYDQERFDNSDLSA 556
                              |      -  |    356       366       376|        -         -  |  | 383       393|        -         -       397       407       417|        - |     427|        -         -         -    |  434 |       -         -    |  442         -         -         -         -         -         -         - |     451  |      -     | 459       469       479       489       499       509       519       529       539       549       
                            348       349                         377                   378  |  |         394                        395                    418        419      428                               429    436                    437  442                                                                     443        454          455                                                                                                     
                                                                                           381  |                                                                                                                                                                                                                                                                                                                                                            
                                                                                              382                                                                                                                                                                                                                                                                                                                                                            

Chain F from PDB  Type:PROTEIN  Length:211
 aligned with THIO_ECO57 | P0AA27 from UniProtKB/Swiss-Prot  Length:109

    Alignment length:211
                                                                                                                                    109                                                                                                        
                                    12        22        32        42        52        62        72        82        92       102      |  -         -         -         -         -         -         -         -         -         -         - 
           THIO_ECO57     3 DKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLDANLA--------------------------------------------------------------------------------------------------------   -
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...ee....hhhhhh.....eeeeeee...hhhhhhhhhhhhhhhhhh...eeeeeee......hhhhhh.....eeeeee..eeeeeee...hhhhhhhhhhhhh........eeeee...hhhhh..hhhhhhhhhhh....eeeeeeeeee........eeeeeeeee.hhhhhhhhhhhhh..ee..ee.eeee.hhhhhhh..... Sec.struct. author
                 SAPs(SNPs) -----------------Y------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (1) THIOREDOXIN_2  PDB: - UniProt: 1-109                                                                       -------------------------------------------------------------------------------------------------------- PROSITE (1)
                PROSITE (2) ----------------------THIOREDOXIN_1      -------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3dxb F 346 DKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLDANLAGSAMESTVMVLRNMVDPKDIDDDLEGEVTEECGKFGAVNRVIIYQEKQGEEEDAEIIVKIFVEFSIASETHKAIQALNGRWFAGRKVVAEVYDQERFDNSDLSA 556
                                   355       365       375       385       395       405       415       425       435       445       455       465       475       485       495       505       515       525       535       545       555 

Chain G from PDB  Type:PROTEIN  Length:211
 aligned with PUF60_HUMAN | Q9UHX1 from UniProtKB/Swiss-Prot  Length:559

    Alignment length:417
                                   152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362       372       382       392       402       412       422       432       442       452       462       472       482       492       502       512       522       532       542       552       
          PUF60_HUMAN   143 DTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQMNSVMLGGRNIKVGRPSNIGQAQPIIDQLAEEARAFNRIYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDAVSSMNLFDLGGQYLRVGKAVTPPMPLLTPATPGGLPPAAAVAAAAATAKITAQEAVAGAAVLGTLGTPGLVSPALTLAQPLGTLPQAVMAAQAPGVITGVTPARPPIPVTIPSVGVVNPILASPPTLGLLEPKKEKEEEELFPESERPEMLSEQEHMSISGSSARHMVMQKLLRKQESTVMVLRNMVDPKDIDDDLEGEVTEECGKFGAVNRVIIYQEKQGEEEDAEIIVKIFVEFSIASETHKAIQALNGRWFAGRKVVAEVYDQERFDNSDLSA 559
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...---------ee....hhhhhh.....eeeeeee...hh---------------------hhhh--hhhhhhhhhhhh.--------------------------..eeeeeee......hhhhhh...----------..eeeeee..---------------------------------eeeeeee.----------------------..hhhh-----------------------------------------------------------------------hhhhhhhhhh..------------.....eeeee...hhhhh..hhhhhhhhhhh....eeeeeeeeee........eeeeeeeee.hhhhhhhhhhhhh..ee..ee.eeee.hhhhhhh..... Sec.struct. author
                 SAPs(SNPs) --------------------------Y------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE RRM  PDB: - UniProt: 129-207                                     ------------------RRM  PDB: G:395-428 UniProt: 226-304                                           -------------------------------------------------------------------------------------------------------------------------------------------------------------RRM  PDB: G:459-546 UniProt: 462-549                                                    ---------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3dxb G 346 DKI---------IHLTDDSFDTDVLKADGAILVDFWAEWCG---------------------PCKM--IAPILDEIADEYQ--------------------------GKLTVAKLNIDQNPGTAPKYGIRG----------IPTLLLFKNG---------------------------------EVAATKVG----------------------ALSKGQ-----------------------------------------------------------------------LKEFLDANLAGS------------AMESTVMVLRNMVDPKDIDDDLEGEVTEECGKFGAVNRVIIYQEKQGEEEDAEIIVKIFVEFSIASETHKAIQALNGRWFAGRKVVAEVYDQERFDNSDLSA 556
                              |      -  |    356       366       376|        -         -  |  | 383       393|        -         -       397       407       417|        - |     427|        -         -         -    |  434 |       -         -    |  442         -         -         -         -         -         -         - |     451  |      -     | 459       469       479       489       499       509       519       529       539       549       
                            348       349                         377                   378  |  |         394                        395                    418        419      428                               429    436                    437  442                                                                     443        454          455                                                                                                     
                                                                                           381  |                                                                                                                                                                                                                                                                                                                                                            
                                                                                              382                                                                                                                                                                                                                                                                                                                                                            

Chain G from PDB  Type:PROTEIN  Length:211
 aligned with THIO_ECO57 | P0AA27 from UniProtKB/Swiss-Prot  Length:109

    Alignment length:211
                                                                                                                                    109                                                                                                        
                                    12        22        32        42        52        62        72        82        92       102      |  -         -         -         -         -         -         -         -         -         -         - 
           THIO_ECO57     3 DKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLDANLA--------------------------------------------------------------------------------------------------------   -
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...ee....hhhhhh.....eeeeeee...hhhhhhhhhhhhhhhhhh...eeeeeee......hhhhhh.....eeeeee..eeeeeee...hhhhhhhhhhhhhh.......eeeee...hhhhh..hhhhhhhhhhh....eeeeeeeeee........eeeeeeeee.hhhhhhhhhhhhh..ee..ee.eeee.hhhhhhh..... Sec.struct. author
                 SAPs(SNPs) -----------------Y------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (1) THIOREDOXIN_2  PDB: - UniProt: 1-109                                                                       -------------------------------------------------------------------------------------------------------- PROSITE (1)
                PROSITE (2) ----------------------THIOREDOXIN_1      -------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3dxb G 346 DKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLDANLAGSAMESTVMVLRNMVDPKDIDDDLEGEVTEECGKFGAVNRVIIYQEKQGEEEDAEIIVKIFVEFSIASETHKAIQALNGRWFAGRKVVAEVYDQERFDNSDLSA 556
                                   355       365       375       385       395       405       415       425       435       445       455       465       475       485       495       505       515       525       535       545       555 

Chain H from PDB  Type:PROTEIN  Length:211
 aligned with PUF60_HUMAN | Q9UHX1 from UniProtKB/Swiss-Prot  Length:559

    Alignment length:417
                                   152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362       372       382       392       402       412       422       432       442       452       462       472       482       492       502       512       522       532       542       552       
          PUF60_HUMAN   143 DTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQMNSVMLGGRNIKVGRPSNIGQAQPIIDQLAEEARAFNRIYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDAVSSMNLFDLGGQYLRVGKAVTPPMPLLTPATPGGLPPAAAVAAAAATAKITAQEAVAGAAVLGTLGTPGLVSPALTLAQPLGTLPQAVMAAQAPGVITGVTPARPPIPVTIPSVGVVNPILASPPTLGLLEPKKEKEEEELFPESERPEMLSEQEHMSISGSSARHMVMQKLLRKQESTVMVLRNMVDPKDIDDDLEGEVTEECGKFGAVNRVIIYQEKQGEEEDAEIIVKIFVEFSIASETHKAIQALNGRWFAGRKVVAEVYDQERFDNSDLSA 559
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...---------ee....hhhhhh.....eeeeeee...hh---------------------hhhh--hhhhhhhhhhhh.--------------------------..eeeeeee......hhhhhh...----------..eeeeee..---------------------------------eeeeeee.----------------------..hhhh-----------------------------------------------------------------------hhhhhhhhhhh.------------.....eeeee...hhhhh..hhhhhhhhhhh....eeeeeeeeeee......eeeeeeeeee.hhhhhhhhhhhhh..ee..ee.eeeeehhhhhhh..... Sec.struct. author
                 SAPs(SNPs) --------------------------Y------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE RRM  PDB: - UniProt: 129-207                                     ------------------RRM  PDB: H:395-428 UniProt: 226-304                                           -------------------------------------------------------------------------------------------------------------------------------------------------------------RRM  PDB: H:459-546 UniProt: 462-549                                                    ---------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3dxb H 346 DKI---------IHLTDDSFDTDVLKADGAILVDFWAEWCG---------------------PCKM--IAPILDEIADEYQ--------------------------GKLTVAKLNIDQNPGTAPKYGIRG----------IPTLLLFKNG---------------------------------EVAATKVG----------------------ALSKGQ-----------------------------------------------------------------------LKEFLDANLAGS------------AMESTVMVLRNMVDPKDIDDDLEGEVTEECGKFGAVNRVIIYQEKQGEEEDAEIIVKIFVEFSIASETHKAIQALNGRWFAGRKVVAEVYDQERFDNSDLSA 556
                              |      -  |    356       366       376|        -         -  |  | 383       393|        -         -       397       407       417|        - |     427|        -         -         -    |  434 |       -         -    |  442         -         -         -         -         -         -         - |     451  |      -     | 459       469       479       489       499       509       519       529       539       549       
                            348       349                         377                   378  |  |         394                        395                    418        419      428                               429    436                    437  442                                                                     443        454          455                                                                                                     
                                                                                           381  |                                                                                                                                                                                                                                                                                                                                                            
                                                                                              382                                                                                                                                                                                                                                                                                                                                                            

Chain H from PDB  Type:PROTEIN  Length:211
 aligned with THIO_ECO57 | P0AA27 from UniProtKB/Swiss-Prot  Length:109

    Alignment length:211
                                                                                                                                    109                                                                                                        
                                    12        22        32        42        52        62        72        82        92       102      |  -         -         -         -         -         -         -         -         -         -         - 
           THIO_ECO57     3 DKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLDANLA--------------------------------------------------------------------------------------------------------   -
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...ee....hhhhhh.....eeeeeee...hhhhhhhhhhhhhhhhhh...eeeeeee......hhhhhh.....eeeeee..eeeeeee...hhhhhhhhhhhhhhh......eeeee...hhhhh..hhhhhhhhhhh....eeeeeeeeeee......eeeeeeeeee.hhhhhhhhhhhhh..ee..ee.eeeeehhhhhhh..... Sec.struct. author
                 SAPs(SNPs) -----------------Y------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (1) THIOREDOXIN_2  PDB: - UniProt: 1-109                                                                       -------------------------------------------------------------------------------------------------------- PROSITE (1)
                PROSITE (2) ----------------------THIOREDOXIN_1      -------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3dxb H 346 DKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLDANLAGSAMESTVMVLRNMVDPKDIDDDLEGEVTEECGKFGAVNRVIIYQEKQGEEEDAEIIVKIFVEFSIASETHKAIQALNGRWFAGRKVVAEVYDQERFDNSDLSA 556
                                   355       365       375       385       395       405       415       425       435       445       455       465       475       485       495       505       515       525       535       545       555 

   Legend:   → Mismatch (orange background)
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  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 3DXB)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 3DXB)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 3DXB)

(-) Gene Ontology  (21, 21)

Asymmetric Unit(hide GO term definitions)
Chain A,B,C,D,E,F,G,H   (THIO_ECO57 | P0AA27)
molecular function
    GO:0015035    protein disulfide oxidoreductase activity    Catalysis of the reaction: a protein with reduced sulfide groups = a protein with oxidized disulfide bonds.
biological process
    GO:0045454    cell redox homeostasis    Any process that maintains the redox environment of a cell or compartment within a cell.
    GO:0006662    glycerol ether metabolic process    The chemical reactions and pathways involving glycerol ethers, any anhydride formed between two organic hydroxy compounds, one of which is glycerol.
    GO:0055114    oxidation-reduction process    A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
cellular component
    GO:0005623    cell    The basic structural and functional unit of all organisms. Includes the plasma membrane and any external encapsulating structures such as the cell wall and cell envelope.

Chain A,B,C,D,E,F,G,H   (PUF60_HUMAN | Q9UHX1)
molecular function
    GO:0003677    DNA binding    Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
    GO:0003723    RNA binding    Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
    GO:0042802    identical protein binding    Interacting selectively and non-covalently with an identical protein or proteins.
    GO:0003676    nucleic acid binding    Interacting selectively and non-covalently with any nucleic acid.
    GO:0000166    nucleotide binding    Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
    GO:0005515    protein binding    Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
biological process
    GO:0008380    RNA splicing    The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA.
    GO:0006915    apoptotic process    A programmed cell death process which begins when a cell receives an internal (e.g. DNA damage) or external signal (e.g. an extracellular death ligand), and proceeds through a series of biochemical events (signaling pathway phase) which trigger an execution phase. The execution phase is the last step of an apoptotic process, and is typically characterized by rounding-up of the cell, retraction of pseudopodes, reduction of cellular volume (pyknosis), chromatin condensation, nuclear fragmentation (karyorrhexis), plasma membrane blebbing and fragmentation of the cell into apoptotic bodies. When the execution phase is completed, the cell has died.
    GO:0006397    mRNA processing    Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide.
    GO:0006355    regulation of transcription, DNA-templated    Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
    GO:0006351    transcription, DNA-templated    The cellular synthesis of RNA on a template of DNA.
cellular component
    GO:0030054    cell junction    A cellular component that forms a specialized region of connection between two or more cells or between a cell and the extracellular matrix. At a cell junction, anchoring proteins extend through the plasma membrane to link cytoskeletal proteins in one cell to cytoskeletal proteins in neighboring cells or to proteins in the extracellular matrix.
    GO:0019907    cyclin-dependent protein kinase activating kinase holoenzyme complex    A cyclin-dependent kinase activating kinase complex capable of activating cyclin-dependent kinases by threonine phosphorylation, thus regulating cell cycle progression. consists of a kinase, cyclin and optional assembly factors, in human CDK7, CCNH and MNAT1. CAK activity is itself regulated throughout the cell cycle by T-loop phosphorylation of its kinase component (CDK7 in human). Phosphorylation of serine residues during mitosis inactivates the enzyme. Also capable of CAK phosphorylating the carboxyl-terminal domain (CTD) of RNA polymerase II and other transcription activating proteins, as part of the general transcription factor TFIIH.
    GO:0030529    intracellular ribonucleoprotein complex    An intracellular macromolecular complex containing both protein and RNA molecules.
    GO:0005654    nucleoplasm    That part of the nuclear content other than the chromosomes or the nucleolus.
    GO:0005634    nucleus    A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        PUF60_HUMAN | Q9UHX12dny 2kxf 2kxh 2qfj 3ue2 3us5 3uwt
        THIO_ECO57 | P0AA271m7t 1oaz 1zzy 2bto 5e4w 5hr1 5ikn

(-) Related Entries Specified in the PDB File

(no "Related Entries Specified in the PDB File" available for 3DXB)