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(-) Description

Title :  CRYSTAL STRUCTURE OF GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE FROM PLASMODIUM FALCIPARUM AT 2.25 ANGSTROM RESOLUTION REVEALS INTRIGUING EXTRA ELECTRON DENSITY IN THE ACTIVE SITE
 
Authors :  M. A. Robien, J. Bosch, W. G. J. Hol, Structural Genomics Of Pathogen Protozoa Consortium (Sgpp)
Date :  26 Sep 05  (Deposition) - 04 Oct 05  (Release) - 13 Jul 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.50
Chains :  Asym./Biol. Unit :  O,P,Q,R
Keywords :  Structural Genomics, Psi, Protein Structure Initiative, Gapdh, Glyceraldehyde-3-Phosphate Dehydrogenase, Structural Genomics Of Pathogenic Protozoa Consortium, Sgpp, Oxidoreductase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  M. A. Robien, J. Bosch, F. S. Buckner, W. C. Van Voorhis, E. A. Worthey, P. Myler, C. Mehlin, E. E. Boni, O. Kalyuzhniy, L. Anderson, A. Lauricella, S. Gulde, J. R. Luft, G. Detitta, J. M. Caruthers, K. O. Hodgson, M. Soltis, F. Zucker, C. L. Verlinde, E. A. Merritt, L. W. Schoenfeld, W. G. Hol
Crystal Structure Of Glyceraldehyde-3-Phosphate Dehydrogenase From Plasmodium Falciparum At 2. 25 A Resolution Reveals Intriguing Extra Electron Density In The Active Site
Proteins V. 62 570 2006
PubMed-ID: 16345073  |  Reference-DOI: 10.1002/PROT.20801

(-) Compounds

Molecule 1 - GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE
    Chains: O, P, Q, R
    EC Number: 1.2.1.12
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PET14B
    Expression System Strain: BL21STAR(DE3)
    Expression System Taxid: 562
    Expression System Vector Type: T7 SYSTEM
    Gene: PF14_0598
    Mutation: YES
    Organism Common: MALARIA PARASITE P. FALCIPARUM
    Organism Scientific: PLASMODIUM FALCIPARUM
    Organism Taxid: 5833

 Structural Features

(-) Chains, Units

  1234
Asymmetric/Biological Unit : OPQR

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 7)

Asymmetric/Biological Unit (2, 7)
No.NameCountTypeFull Name
1AES3Ligand/Ion4-(2-AMINOETHYL)BENZENESULFONYL FLUORIDE
2NAD4Ligand/IonNICOTINAMIDE-ADENINE-DINUCLEOTIDE

(-) Sites  (7, 7)

Asymmetric Unit (7, 7)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREASN O:9 , GLY O:10 , PHE O:11 , GLY O:12 , ARG O:13 , ILE O:14 , ASP O:35 , PRO O:36 , PHE O:37 , LYS O:80 , SER O:98 , THR O:99 , GLY O:100 , SER O:122 , ALA O:123 , CYS O:153 , ALA O:184 , ASN O:319 , AES O:601 , HOH O:602 , HOH O:616 , HOH O:620 , HOH O:636 , HOH O:643 , HOH O:645 , HOH O:648 , HOH O:655 , HOH O:658BINDING SITE FOR RESIDUE NAD O 501
2AC2SOFTWAREASN P:9 , GLY P:10 , GLY P:12 , ARG P:13 , ILE P:14 , ASN P:34 , ASP P:35 , PRO P:36 , PHE P:37 , LYS P:80 , SER P:98 , THR P:99 , GLY P:100 , SER P:122 , ALA P:123 , CYS P:153 , ALA P:184 , ASN P:319 , TYR P:323 , AES P:602 , HOH P:706 , HOH P:711 , HOH P:718 , HOH P:729 , HOH P:752 , HOH P:754BINDING SITE FOR RESIDUE NAD P 701
3AC3SOFTWAREGLY Q:10 , PHE Q:11 , GLY Q:12 , ARG Q:13 , ILE Q:14 , ASP Q:35 , PRO Q:36 , PHE Q:37 , MET Q:38 , SER Q:98 , THR Q:99 , GLY Q:100 , VAL Q:101 , SER Q:122 , ALA Q:123 , CYS Q:153 , ALA Q:184 , ASN Q:319 , HOH Q:802 , HOH Q:825 , HOH Q:830 , HOH Q:839 , HOH Q:850BINDING SITE FOR RESIDUE NAD Q 801
4AC4SOFTWAREASN R:9 , GLY R:10 , GLY R:12 , ARG R:13 , ILE R:14 , ASN R:34 , ASP R:35 , PRO R:36 , PHE R:37 , GLU R:79 , LYS R:80 , SER R:98 , THR R:99 , GLY R:100 , SER R:122 , ALA R:123 , CYS R:153 , ALA R:184 , ASN R:319 , TYR R:323 , AES R:603 , HOH R:911 , HOH R:914 , HOH R:915 , HOH R:921 , HOH R:922 , HOH R:927 , HOH R:940BINDING SITE FOR RESIDUE NAD R 901
5AC5SOFTWARETHR O:183 , ASN O:185 , NAD O:501BINDING SITE FOR RESIDUE AES O 601
6AC6SOFTWARETHR P:183 , ASN P:185 , NAD P:701BINDING SITE FOR RESIDUE AES P 602
7AC7SOFTWARETHR R:183 , ASN R:185 , ARG R:237 , NAD R:901BINDING SITE FOR RESIDUE AES R 603

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 2B4T)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 2B4T)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 2B4T)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 2B4T)

(-) Exons   (0, 0)

(no "Exon" information available for 2B4T)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain O from PDB  Type:PROTEIN  Length:333
 aligned with Q8T6B1_PLAFA | Q8T6B1 from UniProtKB/TrEMBL  Length:337

    Alignment length:333
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273       283       293       303       313       323       333   
         Q8T6B1_PLAFA     4 TKLGINGFGRIGRLVFRAAFGRKDIEVVAINDPFMDLNHLCYLLKYDSVHGQFPCEVTHADGFLLIGEKKVSVFAEKDPSQIPWGKCQVDVVCESTGVFLTKELASSHLKGGAKKVIMSAPPKDDTPIYVMGINHHQYDTKQLIVSNASCTTNCLAPLAKVINDRFGIVEGLMTTVHASTANQLVVDGPSKGGKDWRAGRCALSNIIPASTGAAKAVGKVLPELNGKLTGVAFRVPIGTVSVVDLVCRLQKPAKYEEVALEIKKAAEGPLKGILGYTEDEVVSQDFVHDNRSSIFDMKAGLALNDNFFKLVSWYDNEWGYSNRVLDLAVHITN 336
               SCOP domains d2b4to1 O:4-152,O:319-336 Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)                                                                           d2b4to2 O:153-318 Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)                                                                                                    d2b4to1            SCOP domains
               CATH domains 2b4tO01 O:4-150,O:320-336 NAD(P)-binding Rossmann-like Domain                                                                                      2b4tO02 O:151-319 Dihydrodipicolinate Reductase; domain 2                                                                                                                2b4tO01           CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeee..hhhhhhhhhhhhh....eeeeee....hhhhhhhhhhh..........eeee..eeee...eeeee...hhhhh.hhhhh..eeee......hhhhhhhhhhh...eeee...............hhhhh.....eee..hhhhhhhhhhhhhhhhhh.eeeeeeeeee............hhhhhhhhhhh......eeee.....hhhhhhhhhh..eeeeeee......eeeeeeeee....hhhhhhhhhhhhhhh.....eeee....hhhhhh.....eeee.hhheeee..eeeeeeee..hhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2b4t O   4 TKLGINGFGRIGRLVFRAAFGRKDIEVVAINDPFMDLNHLCYLLKYDSVHGQFPCEVTHADGFLLIGEKKVSVFAEKDPSQIPWGKCQVDVVCESTGVFLTKELASSHLKGGAKKVIMSAPPKDDTPIYVMGINHHQYDTKQLIVSNASCTTNCLAPLAKVINDRFGIVEGLMTTVHASTANQLVVDGPSKGGKDWRAGRCALSNIIPASTGAAKAVGKVLPELNGKLTGVAFRVPIGTVSVVDLVCRLQKPAKYEEVALEIKKAAEGPLKGILGYTEDEVVSQDFVHDNRSSIFDMKAGLALNDNFFKLVSWYDNEWGYSNRVLDLAVHITT 336
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273       283       293       303       313       323       333   


Chain P from PDB  Type:PROTEIN  Length:333
 aligned with Q8T6B1_PLAFA | Q8T6B1 from UniProtKB/TrEMBL  Length:337

    Alignment length:333
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273       283       293       303       313       323       333   
         Q8T6B1_PLAFA     4 TKLGINGFGRIGRLVFRAAFGRKDIEVVAINDPFMDLNHLCYLLKYDSVHGQFPCEVTHADGFLLIGEKKVSVFAEKDPSQIPWGKCQVDVVCESTGVFLTKELASSHLKGGAKKVIMSAPPKDDTPIYVMGINHHQYDTKQLIVSNASCTTNCLAPLAKVINDRFGIVEGLMTTVHASTANQLVVDGPSKGGKDWRAGRCALSNIIPASTGAAKAVGKVLPELNGKLTGVAFRVPIGTVSVVDLVCRLQKPAKYEEVALEIKKAAEGPLKGILGYTEDEVVSQDFVHDNRSSIFDMKAGLALNDNFFKLVSWYDNEWGYSNRVLDLAVHITN 336
               SCOP domains d2b4tp1 P:4-152,P:319-336 Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)                                                                           d2b4tp2 P:153-318 Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)                                                                                                    d2b4tp1            SCOP domains
               CATH domains 2b4tP01 P:4-150,P:320-336 NAD(P)-binding Rossmann-like Domain                                                                                      2b4tP02 P:151-319 Dihydrodipicolinate Reductase; domain 2                                                                                                                2b4tP01           CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeee..hhhhhhhhhhhhhh...eeeeee....hhhhhhhhhhh...........eee..eee....eeeee...hhhhh.hhhhh..eeee......hhhhhhhhhhh...eeee...............hhhhh.....eee..hhhhhhhhhhhhhhhhhh.eeeeeeeeee............hhhhhhhhhhh......eeee.hhhhhhhhhhhhhh..eeeeeee......eeeeeeeee....hhhhhhhhhhhhhhh.....eeee....hhhhhh.....eeee....eeee..eeeeeeee..hhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2b4t P   4 TKLGINGFGRIGRLVFRAAFGRKDIEVVAINDPFMDLNHLCYLLKYDSVHGQFPCEVTHADGFLLIGEKKVSVFAEKDPSQIPWGKCQVDVVCESTGVFLTKELASSHLKGGAKKVIMSAPPKDDTPIYVMGINHHQYDTKQLIVSNASCTTNCLAPLAKVINDRFGIVEGLMTTVHASTANQLVVDGPSKGGKDWRAGRCALSNIIPASTGAAKAVGKVLPELNGKLTGVAFRVPIGTVSVVDLVCRLQKPAKYEEVALEIKKAAEGPLKGILGYTEDEVVSQDFVHDNRSSIFDMKAGLALNDNFFKLVSWYDNEWGYSNRVLDLAVHITT 336
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273       283       293       303       313       323       333   


Chain Q from PDB  Type:PROTEIN  Length:333
 aligned with Q8T6B1_PLAFA | Q8T6B1 from UniProtKB/TrEMBL  Length:337

    Alignment length:333
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273       283       293       303       313       323       333   
         Q8T6B1_PLAFA     4 TKLGINGFGRIGRLVFRAAFGRKDIEVVAINDPFMDLNHLCYLLKYDSVHGQFPCEVTHADGFLLIGEKKVSVFAEKDPSQIPWGKCQVDVVCESTGVFLTKELASSHLKGGAKKVIMSAPPKDDTPIYVMGINHHQYDTKQLIVSNASCTTNCLAPLAKVINDRFGIVEGLMTTVHASTANQLVVDGPSKGGKDWRAGRCALSNIIPASTGAAKAVGKVLPELNGKLTGVAFRVPIGTVSVVDLVCRLQKPAKYEEVALEIKKAAEGPLKGILGYTEDEVVSQDFVHDNRSSIFDMKAGLALNDNFFKLVSWYDNEWGYSNRVLDLAVHITN 336
               SCOP domains d2b4tq1 Q:4-152,Q:319-336 Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)                                                                           d2b4tq2 Q:153-318 Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)                                                                                                    d2b4tq1            SCOP domains
               CATH domains 2b4tQ01 Q:4-150,Q:320-336 NAD(P)-binding Rossmann-like Domain                                                                                      2b4tQ02 Q:151-319 Dihydrodipicolinate Reductase; domain 2                                                                                                                2b4tQ01           CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeee..hhhhhhhhhhhhhh...eeeeee....hhhhhhhhhhh..........eeee..eeee..eeeeee................eeee......hhhhhhhhhhh...eeee...............hhhhh.....eee..hhhhhhhhhhhhhhhhhh.eeeeeeeeee............hhhhhhhhhhh......eeee.hhhhhhhhhhhhhh..eeeeeee......eeeeeeeee....hhhhhhhhhhhhhh......eeee....hhhhhh.....eeee....eeee..eeeeeeee..hhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2b4t Q   4 TKLGINGFGRIGRLVFRAAFGRKDIEVVAINDPFMDLNHLCYLLKYDSVHGQFPCEVTHADGFLLIGEKKVSVFAEKDPSQIPWGKCQVDVVCESTGVFLTKELASSHLKGGAKKVIMSAPPKDDTPIYVMGINHHQYDTKQLIVSNASCTTNCLAPLAKVINDRFGIVEGLMTTVHASTANQLVVDGPSKGGKDWRAGRCALSNIIPASTGAAKAVGKVLPELNGKLTGVAFRVPIGTVSVVDLVCRLQKPAKYEEVALEIKKAAEGPLKGILGYTEDEVVSQDFVHDNRSSIFDMKAGLALNDNFFKLVSWYDNEWGYSNRVLDLAVHITT 336
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273       283       293       303       313       323       333   


Chain R from PDB  Type:PROTEIN  Length:333
 aligned with Q8T6B1_PLAFA | Q8T6B1 from UniProtKB/TrEMBL  Length:337

    Alignment length:333
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273       283       293       303       313       323       333   
         Q8T6B1_PLAFA     4 TKLGINGFGRIGRLVFRAAFGRKDIEVVAINDPFMDLNHLCYLLKYDSVHGQFPCEVTHADGFLLIGEKKVSVFAEKDPSQIPWGKCQVDVVCESTGVFLTKELASSHLKGGAKKVIMSAPPKDDTPIYVMGINHHQYDTKQLIVSNASCTTNCLAPLAKVINDRFGIVEGLMTTVHASTANQLVVDGPSKGGKDWRAGRCALSNIIPASTGAAKAVGKVLPELNGKLTGVAFRVPIGTVSVVDLVCRLQKPAKYEEVALEIKKAAEGPLKGILGYTEDEVVSQDFVHDNRSSIFDMKAGLALNDNFFKLVSWYDNEWGYSNRVLDLAVHITN 336
               SCOP domains d2b4tr1 R:4-152,R:319-336 Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)                                                                           d2b4tr2 R:153-318 Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)                                                                                                    d2b4tr1            SCOP domains
               CATH domains 2b4tR01 R:4-150,R:320-336 NAD(P)-binding Rossmann-like Domain                                                                                      2b4tR02 R:151-319 Dihydrodipicolinate Reductase; domain 2                                                                                                                2b4tR01           CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeee..hhhhhhhhhhhhh....eeeeee....hhhhhhhhhhh..........eeee..eeee..eeeeee...hhhhhhhhhhh..eeee......hhhhhhhhhhhh..eeee...............hhhhh.....eee..hhhhhhhhhhhhhhhhhhheeeeeeeeee............hhhhhhhhhhh......eeee.hhhhhhhhhhhhhh..eeeeeee......eeeeeeeee....hhhhhhhhhhhhhhh.....eeee....hhhhhh.....eeee....ee....eeeeeeee..hhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2b4t R   4 TKLGINGFGRIGRLVFRAAFGRKDIEVVAINDPFMDLNHLCYLLKYDSVHGQFPCEVTHADGFLLIGEKKVSVFAEKDPSQIPWGKCQVDVVCESTGVFLTKELASSHLKGGAKKVIMSAPPKDDTPIYVMGINHHQYDTKQLIVSNASCTTNCLAPLAKVINDRFGIVEGLMTTVHASTANQLVVDGPSKGGKDWRAGRCALSNIIPASTGAAKAVGKVLPELNGKLTGVAFRVPIGTVSVVDLVCRLQKPAKYEEVALEIKKAAEGPLKGILGYTEDEVVSQDFVHDNRSSIFDMKAGLALNDNFFKLVSWYDNEWGYSNRVLDLAVHITT 336
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273       283       293       303       313       323       333
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (2, 8)

Asymmetric/Biological Unit
(-)
Class: Alpha and beta proteins (a+b) (23004)
(-)
Class: Alpha and beta proteins (a/b) (23833)

(-) CATH Domains  (2, 8)

Asymmetric/Biological Unit
(-)
Class: Alpha Beta (26913)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 2B4T)

(-) Gene Ontology  (9, 9)

Asymmetric/Biological Unit(hide GO term definitions)
Chain O,P,Q,R   (Q8T6B1_PLAFA | Q8T6B1)
molecular function
    GO:0051287    NAD binding    Interacting selectively and non-covalently with nicotinamide adenine dinucleotide, a coenzyme involved in many redox and biosynthetic reactions; binding may be to either the oxidized form, NAD+, or the reduced form, NADH.
    GO:0050661    NADP binding    Interacting selectively and non-covalently with nicotinamide-adenine dinucleotide phosphate, a coenzyme involved in many redox and biosynthetic reactions; binding may be to either the oxidized form, NADP+, or the reduced form, NADPH.
    GO:0004365    glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity    Catalysis of the reaction: D-glyceraldehyde 3-phosphate + phosphate + NAD+ = 3-phospho-D-glyceroyl phosphate + NADH + H+.
    GO:0000166    nucleotide binding    Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
    GO:0016491    oxidoreductase activity    Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
    GO:0016620    oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor    Catalysis of an oxidation-reduction (redox) reaction in which an aldehyde or ketone (oxo) group acts as a hydrogen or electron donor and reduces NAD or NADP.
biological process
    GO:0006006    glucose metabolic process    The chemical reactions and pathways involving glucose, the aldohexose gluco-hexose. D-glucose is dextrorotatory and is sometimes known as dextrose; it is an important source of energy for living organisms and is found free as well as combined in homo- and hetero-oligosaccharides and polysaccharides.
    GO:0006096    glycolytic process    The chemical reactions and pathways resulting in the breakdown of a carbohydrate into pyruvate, with the concomitant production of a small amount of ATP and the reduction of NAD(P) to NAD(P)H. Glycolysis begins with the metabolism of a carbohydrate to generate products that can enter the pathway and ends with the production of pyruvate. Pyruvate may be converted to acetyl-coenzyme A, ethanol, lactate, or other small molecules.
    GO:0055114    oxidation-reduction process    A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.

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  2b4t
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  Q8T6B1_PLAFA | Q8T6B1
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  1.2.1.12
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/TrEMBL
        Q8T6B1_PLAFA | Q8T6B1: 1ywg 2b4r

(-) Related Entries Specified in the PDB File

2b4r PDB 2B4R IS A MONOCLINIC DATASET FROM A DIFFERENT CRYSTAL DIFFRACTING TO 2.25 ANGSTROM. THIS DEPOSIT HAS A SLIGHTLY DIFFERENCE MONOCLINIC CELL AND DIFFRACTS TO 2.5 ANGSTROMS. SIMILAR ELECTRON DENSITY FEATURES ARE FOUND ADJACENT TO THE ACTIVE SITE NAD.