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(-) Description

Title :  THE STRUCTURE OF GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE FROM PLASMODIUM FALCIPARUM
 
Authors :  J. F. Satchell, N. Klonis, R. L. Malby, A. Adisa, A. E. Alpyurek, P. M. Col L. Tilley
Date :  17 Feb 05  (Deposition) - 29 Nov 05  (Release) - 12 Nov 14  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.60
Chains :  Asym./Biol. Unit :  O,P,Q,R
Keywords :  Rossmann Fold, Dehydrogenase, Tetrameric, Oxidoreductase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  J. F. Satchell, R. L. Malby, C. S. Luo, A. Adisa, A. E. Alpyurek, N. Klonis, B. J. Smith, L. Tilley, P. M. Colman
Structure Of Glyceraldehyde-3-Phosphate Dehydrogenase From Plasmodium Falciparum.
Acta Crystallogr. , Sect. D V. 61 1213 2005
PubMed-ID: 16131754  |  Reference-DOI: 10.1107/S0907444905018317

(-) Compounds

Molecule 1 - GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE
    Chains: O, P, Q, R
    EC Number: 1.2.1.12
    Engineered: YES
    Expression System: ESCHERICHIA COLI BL21(DE3)
    Expression System Plasmid: PET-15B
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 469008
    Expression System Vector Type: PLASMID
    Gene: 3D7
    Organism Common: MALARIA PARASITE P. FALCIPARUM
    Organism Scientific: PLASMODIUM FALCIPARUM
    Organism Taxid: 5833
    Synonym: GAPDH

 Structural Features

(-) Chains, Units

  1234
Asymmetric/Biological Unit : OPQR

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 4)

Asymmetric/Biological Unit (1, 4)
No.NameCountTypeFull Name
1NAD4Ligand/IonNICOTINAMIDE-ADENINE-DINUCLEOTIDE

(-) Sites  (4, 4)

Asymmetric Unit (4, 4)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREASN O:9 , GLY O:10 , PHE O:11 , GLY O:12 , ARG O:13 , ILE O:14 , ASN O:34 , ASP O:35 , PRO O:36 , PHE O:37 , GLU O:79 , LYS O:80 , SER O:98 , THR O:99 , PHE O:102 , SER O:122 , ALA O:123 , CYS O:153 , THR O:183 , ALA O:184 , ASN O:319 , TYR O:323 , HOH O:406 , HOH O:415 , HOH O:469 , HOH O:541 , HOH O:544 , HOH O:586 , HOH O:639 , HOH O:659 , HOH O:700BINDING SITE FOR RESIDUE NAD O 401
2AC2SOFTWAREASN P:9 , GLY P:10 , PHE P:11 , GLY P:12 , ARG P:13 , ILE P:14 , ASN P:34 , ASP P:35 , PRO P:36 , PHE P:37 , GLU P:79 , LYS P:80 , SER P:98 , THR P:99 , PHE P:102 , SER P:122 , ALA P:123 , CYS P:153 , ALA P:184 , ASN P:319 , TYR P:323 , HOH P:492 , HOH P:493 , HOH P:563 , HOH P:665 , HOH P:711BINDING SITE FOR RESIDUE NAD P 402
3AC3SOFTWAREHOH P:655 , ASN Q:9 , GLY Q:10 , PHE Q:11 , GLY Q:12 , ARG Q:13 , ILE Q:14 , ASN Q:34 , ASP Q:35 , PRO Q:36 , PHE Q:37 , GLU Q:79 , LYS Q:80 , SER Q:98 , THR Q:99 , PHE Q:102 , SER Q:122 , ALA Q:123 , CYS Q:153 , ALA Q:184 , ASN Q:319 , TYR Q:323 , HOH Q:429 , HOH Q:436 , HOH Q:498 , HOH Q:511 , HOH Q:716 , HOH Q:831BINDING SITE FOR RESIDUE NAD Q 403
4AC4SOFTWAREASN R:9 , GLY R:10 , PHE R:11 , GLY R:12 , ARG R:13 , ILE R:14 , ASN R:34 , ASP R:35 , PRO R:36 , PHE R:37 , GLU R:79 , LYS R:80 , SER R:98 , THR R:99 , PHE R:102 , SER R:122 , ALA R:123 , CYS R:153 , ALA R:184 , ASN R:319 , TYR R:323 , HOH R:442 , HOH R:471 , HOH R:577 , HOH R:734 , HOH R:736 , HOH R:789BINDING SITE FOR RESIDUE NAD R 404

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 1YWG)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 1YWG)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 1YWG)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 1YWG)

(-) Exons   (0, 0)

(no "Exon" information available for 1YWG)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain O from PDB  Type:PROTEIN  Length:337
 aligned with Q8T6B1_PLAFA | Q8T6B1 from UniProtKB/TrEMBL  Length:337

    Alignment length:337
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       
         Q8T6B1_PLAFA     1 MAVTKLGINGFGRIGRLVFRAAFGRKDIEVVAINDPFMDLNHLCYLLKYDSVHGQFPCEVTHADGFLLIGEKKVSVFAEKDPSQIPWGKCQVDVVCESTGVFLTKELASSHLKGGAKKVIMSAPPKDDTPIYVMGINHHQYDTKQLIVSNASCTTNCLAPLAKVINDRFGIVEGLMTTVHASTANQLVVDGPSKGGKDWRAGRCALSNIIPASTGAAKAVGKVLPELNGKLTGVAFRVPIGTVSVVDLVCRLQKPAKYEEVALEIKKAAEGPLKGILGYTEDEVVSQDFVHDNRSSIFDMKAGLALNDNFFKLVSWYDNEWGYSNRVLDLAVHITNN 337
               SCOP domains d1ywgo1 O:1-152,O:319-337 Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)                                                                              d1ywgo2 O:153-318 Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)                                                                                                    d1ywgo1             SCOP domains
               CATH domains 1ywgO01 O:1-150,O:320-337 NAD(P)-binding Rossmann-like Domain                                                                                         1ywgO02 O:151-319 Dihydrodipicolinate Reductase; domain 2                                                                                                                1ywgO01            CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeeeee..hhhhhhhhhhhh....eeeeeee....hhhhhhhhhhh..........eeee..eeee..eeeeee...hhhhh........eeee......hhhhhhhhhhh...eeee...............hhhhh.....eee..hhhhhhhhhhhhhhhhhhheeeeeeeeee............hhhhhhhhhhh......eeeeehhhhhhhhhhhhhh..eeeeeee......eeeeeeeee....hhhhhhhhhhhhhhh.....eeee....hhhhhh.....eeee....ee....eeeeeeee..hhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1ywg O   1 MAVTKLGINGFGRIGRLVFRAAFGRKDIEVVAINDPFMDLNHLCYLLKYDSVHGQFPCEVTHADGFLLIGEKKVSVFAEKDPSQIPWGKCQVDVVCESTGVFLTKELASSHLKGGAKKVIMSAPPKDDTPIYVMGINHHQYDTKQLIVSNASCTTNCLAPLAKVINDRFGIVEGLMTTVHASTANQLVVDGPSKGGKDWRAGRCALSNIIPASTGAAKAVGKVLPELNGKLTGVAFRVPIGTVSVVDLVCRLQKPAKYEEVALEIKKAAEGPLKGILGYTEDEVVSQDFVHDNRSSIFDMKAGLALNDNFFKLVSWYDNEWGYSNRVLDLAVHITNN 337
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       


Chain P from PDB  Type:PROTEIN  Length:337
 aligned with Q8T6B1_PLAFA | Q8T6B1 from UniProtKB/TrEMBL  Length:337

    Alignment length:337
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       
         Q8T6B1_PLAFA     1 MAVTKLGINGFGRIGRLVFRAAFGRKDIEVVAINDPFMDLNHLCYLLKYDSVHGQFPCEVTHADGFLLIGEKKVSVFAEKDPSQIPWGKCQVDVVCESTGVFLTKELASSHLKGGAKKVIMSAPPKDDTPIYVMGINHHQYDTKQLIVSNASCTTNCLAPLAKVINDRFGIVEGLMTTVHASTANQLVVDGPSKGGKDWRAGRCALSNIIPASTGAAKAVGKVLPELNGKLTGVAFRVPIGTVSVVDLVCRLQKPAKYEEVALEIKKAAEGPLKGILGYTEDEVVSQDFVHDNRSSIFDMKAGLALNDNFFKLVSWYDNEWGYSNRVLDLAVHITNN 337
               SCOP domains d1ywgp1 P:1-152,P:319-337 Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)                                                                              d1ywgp2 P:153-318 Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)                                                                                                    d1ywgp1             SCOP domains
               CATH domains 1ywgP01 P:1-150,P:320-337 NAD(P)-binding Rossmann-like Domain                                                                                         1ywgP02 P:151-319 Dihydrodipicolinate Reductase; domain 2                                                                                                                1ywgP01            CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeeeee..hhhhhhhhhhhh....eeeeeee....hhhhhhhhhhh..........eeee..eeee..eeeeee...hhhhh........eeee......hhhhhhhhhhh...eeee...............hhhhh.....eee..hhhhhhhhhhhhhhhhhhheeeeeeeeee............hhhhhhhhhhh......eeeeehhhhhhhhhhhhhh..eeeeeee......eeeeeeeee....hhhhhhhhhhhhhhh.....eeee....hhhhhh.....eeee.hhhee....eeeeeeee..hhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1ywg P   1 MAVTKLGINGFGRIGRLVFRAAFGRKDIEVVAINDPFMDLNHLCYLLKYDSVHGQFPCEVTHADGFLLIGEKKVSVFAEKDPSQIPWGKCQVDVVCESTGVFLTKELASSHLKGGAKKVIMSAPPKDDTPIYVMGINHHQYDTKQLIVSNASCTTNCLAPLAKVINDRFGIVEGLMTTVHASTANQLVVDGPSKGGKDWRAGRCALSNIIPASTGAAKAVGKVLPELNGKLTGVAFRVPIGTVSVVDLVCRLQKPAKYEEVALEIKKAAEGPLKGILGYTEDEVVSQDFVHDNRSSIFDMKAGLALNDNFFKLVSWYDNEWGYSNRVLDLAVHITNN 337
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       


Chain Q from PDB  Type:PROTEIN  Length:337
 aligned with Q8T6B1_PLAFA | Q8T6B1 from UniProtKB/TrEMBL  Length:337

    Alignment length:337
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       
         Q8T6B1_PLAFA     1 MAVTKLGINGFGRIGRLVFRAAFGRKDIEVVAINDPFMDLNHLCYLLKYDSVHGQFPCEVTHADGFLLIGEKKVSVFAEKDPSQIPWGKCQVDVVCESTGVFLTKELASSHLKGGAKKVIMSAPPKDDTPIYVMGINHHQYDTKQLIVSNASCTTNCLAPLAKVINDRFGIVEGLMTTVHASTANQLVVDGPSKGGKDWRAGRCALSNIIPASTGAAKAVGKVLPELNGKLTGVAFRVPIGTVSVVDLVCRLQKPAKYEEVALEIKKAAEGPLKGILGYTEDEVVSQDFVHDNRSSIFDMKAGLALNDNFFKLVSWYDNEWGYSNRVLDLAVHITNN 337
               SCOP domains d1ywgq1 Q:1-152,Q:319-337 Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)                                                                              d1ywgq2 Q:153-318 Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)                                                                                                    d1ywgq1             SCOP domains
               CATH domains 1ywgQ01 Q:1-150,Q:320-337 NAD(P)-binding Rossmann-like Domain                                                                                         1ywgQ02 Q:151-319 Dihydrodipicolinate Reductase; domain 2                                                                                                                1ywgQ01            CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeeeee..hhhhhhhhhhhh....eeeeeee....hhhhhhhhhhh..........eeee..eeee..eeeeee...hhhhh........eeee......hhhhhhhhhhh...eeee...............hhhhh.....eee..hhhhhhhhhhhhhhhhhhheeeeeeeeee............hhhhhhhhhhh......eeeeehhhhhhhhhhhhhh..eeeeeee......eeeeeeeee....hhhhhhhhhhhhhhh.....eeee....hhhhhh.....eeee.hhhee....eeeeeeee..hhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1ywg Q   1 MAVTKLGINGFGRIGRLVFRAAFGRKDIEVVAINDPFMDLNHLCYLLKYDSVHGQFPCEVTHADGFLLIGEKKVSVFAEKDPSQIPWGKCQVDVVCESTGVFLTKELASSHLKGGAKKVIMSAPPKDDTPIYVMGINHHQYDTKQLIVSNASCTTNCLAPLAKVINDRFGIVEGLMTTVHASTANQLVVDGPSKGGKDWRAGRCALSNIIPASTGAAKAVGKVLPELNGKLTGVAFRVPIGTVSVVDLVCRLQKPAKYEEVALEIKKAAEGPLKGILGYTEDEVVSQDFVHDNRSSIFDMKAGLALNDNFFKLVSWYDNEWGYSNRVLDLAVHITNN 337
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       


Chain R from PDB  Type:PROTEIN  Length:337
 aligned with Q8T6B1_PLAFA | Q8T6B1 from UniProtKB/TrEMBL  Length:337

    Alignment length:337
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       
         Q8T6B1_PLAFA     1 MAVTKLGINGFGRIGRLVFRAAFGRKDIEVVAINDPFMDLNHLCYLLKYDSVHGQFPCEVTHADGFLLIGEKKVSVFAEKDPSQIPWGKCQVDVVCESTGVFLTKELASSHLKGGAKKVIMSAPPKDDTPIYVMGINHHQYDTKQLIVSNASCTTNCLAPLAKVINDRFGIVEGLMTTVHASTANQLVVDGPSKGGKDWRAGRCALSNIIPASTGAAKAVGKVLPELNGKLTGVAFRVPIGTVSVVDLVCRLQKPAKYEEVALEIKKAAEGPLKGILGYTEDEVVSQDFVHDNRSSIFDMKAGLALNDNFFKLVSWYDNEWGYSNRVLDLAVHITNN 337
               SCOP domains d1ywgr1 R:1-152,R:319-337 Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)                                                                              d1ywgr2 R:153-318 Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)                                                                                                    d1ywgr1             SCOP domains
               CATH domains 1ywgR01 R:1-150,R:320-337 NAD(P)-binding Rossmann-like Domain                                                                                         1ywgR02 R:151-319 Dihydrodipicolinate Reductase; domain 2                                                                                                                1ywgR01            CATH domains
           Pfam domains (1) ---Gp_dh_N-1ywgR05 R:4-153                                                                                                                               ----Gp_dh_C-1ywgR01 R:158-317                                                                                                                                       -------------------- Pfam domains (1)
           Pfam domains (2) ---Gp_dh_N-1ywgR06 R:4-153                                                                                                                               ----Gp_dh_C-1ywgR02 R:158-317                                                                                                                                       -------------------- Pfam domains (2)
           Pfam domains (3) ---Gp_dh_N-1ywgR07 R:4-153                                                                                                                               ----Gp_dh_C-1ywgR03 R:158-317                                                                                                                                       -------------------- Pfam domains (3)
           Pfam domains (4) ---Gp_dh_N-1ywgR08 R:4-153                                                                                                                               ----Gp_dh_C-1ywgR04 R:158-317                                                                                                                                       -------------------- Pfam domains (4)
         Sec.struct. author ...eeeeee..hhhhhhhhhhhh....eeeeeee....hhhhhhhhhhh..........eeee..eeee..eeeeee...hhhhh........eeee......hhhhhhhhhhh...eeee...............hhhhh.....eee..hhhhhhhhhhhhhhhhhhheeeeeeeeee............hhhhhhhhhhh......eeeeehhhhhhhhhhhhhh..eeeeeee......eeeeeeeee....hhhhhhhhhhhhhhh.....eeee....hhhhhh.....eeee....ee....eeeeeeee..hhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1ywg R   1 MAVTKLGINGFGRIGRLVFRAAFGRKDIEVVAINDPFMDLNHLCYLLKYDSVHGQFPCEVTHADGFLLIGEKKVSVFAEKDPSQIPWGKCQVDVVCESTGVFLTKELASSHLKGGAKKVIMSAPPKDDTPIYVMGINHHQYDTKQLIVSNASCTTNCLAPLAKVINDRFGIVEGLMTTVHASTANQLVVDGPSKGGKDWRAGRCALSNIIPASTGAAKAVGKVLPELNGKLTGVAFRVPIGTVSVVDLVCRLQKPAKYEEVALEIKKAAEGPLKGILGYTEDEVVSQDFVHDNRSSIFDMKAGLALNDNFFKLVSWYDNEWGYSNRVLDLAVHITNN 337
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330
   Legend:   → Mismatch (orange background)
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  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (2, 8)

Asymmetric/Biological Unit
(-)
Class: Alpha and beta proteins (a+b) (23004)
(-)
Class: Alpha and beta proteins (a/b) (23833)

(-) CATH Domains  (2, 8)

Asymmetric/Biological Unit
(-)
Class: Alpha Beta (26913)

(-) Pfam Domains  (2, 8)

Asymmetric/Biological Unit
(-)
Clan: GADPH_aa-bio_dh (59)
(-)
Clan: NADP_Rossmann (1239)

(-) Gene Ontology  (9, 9)

Asymmetric/Biological Unit(hide GO term definitions)
Chain O,P,Q,R   (Q8T6B1_PLAFA | Q8T6B1)
molecular function
    GO:0051287    NAD binding    Interacting selectively and non-covalently with nicotinamide adenine dinucleotide, a coenzyme involved in many redox and biosynthetic reactions; binding may be to either the oxidized form, NAD+, or the reduced form, NADH.
    GO:0050661    NADP binding    Interacting selectively and non-covalently with nicotinamide-adenine dinucleotide phosphate, a coenzyme involved in many redox and biosynthetic reactions; binding may be to either the oxidized form, NADP+, or the reduced form, NADPH.
    GO:0004365    glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity    Catalysis of the reaction: D-glyceraldehyde 3-phosphate + phosphate + NAD+ = 3-phospho-D-glyceroyl phosphate + NADH + H+.
    GO:0000166    nucleotide binding    Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
    GO:0016491    oxidoreductase activity    Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
    GO:0016620    oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor    Catalysis of an oxidation-reduction (redox) reaction in which an aldehyde or ketone (oxo) group acts as a hydrogen or electron donor and reduces NAD or NADP.
biological process
    GO:0006006    glucose metabolic process    The chemical reactions and pathways involving glucose, the aldohexose gluco-hexose. D-glucose is dextrorotatory and is sometimes known as dextrose; it is an important source of energy for living organisms and is found free as well as combined in homo- and hetero-oligosaccharides and polysaccharides.
    GO:0006096    glycolytic process    The chemical reactions and pathways resulting in the breakdown of a carbohydrate into pyruvate, with the concomitant production of a small amount of ATP and the reduction of NAD(P) to NAD(P)H. Glycolysis begins with the metabolism of a carbohydrate to generate products that can enter the pathway and ends with the production of pyruvate. Pyruvate may be converted to acetyl-coenzyme A, ethanol, lactate, or other small molecules.
    GO:0055114    oxidation-reduction process    A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.

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  1ywg
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 Related Entries

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UniProtKB/TrEMBL
        Q8T6B1_PLAFA | Q8T6B1: 2b4r 2b4t

(-) Related Entries Specified in the PDB File

(no "Related Entries Specified in the PDB File" available for 1YWG)