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(-) Description

Title :  CRYSTAL STRUCTURE OF GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE FROM PLASMODIUM FALCIPARUM AT 2.25 ANGSTROM RESOLUTION REVEALS INTRIGUING EXTRA ELECTRON DENSITY IN THE ACTIVE SITE
 
Authors :  M. A. Robien, J. Bosch, W. G. J. Hol, Structural Genomics Of Pathogen Protozoa Consortium (Sgpp)
Date :  26 Sep 05  (Deposition) - 04 Oct 05  (Release) - 13 Jul 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.25
Chains :  Asym./Biol. Unit :  O,P,Q,R
Keywords :  Sgpp, Structural Genomics, Psi, Protein Structure Initiative, Gapdh, Glyceraldehyde-3-Phosphate Dehydrogenase, Structural Genomics Of Pathogenic Protozoa Consortium, Oxidoreductase (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  M. A. Robien, J. Bosch, F. S. Buckner, W. C. Van Voorhis, E. A. Worthey, P. Myler, C. Mehlin, E. E. Boni, O. Kalyuzhniy, L. Anderson, A. Lauricella, S. Gulde, J. R. Luft, G. Detitta, J. M. Caruthers, K. O. Hodgson, M. Soltis, F. Zucker, C. L. Verlinde, E. A. Merritt, L. W. Schoenfeld, W. G. Hol
Crystal Structure Of Glyceraldehyde-3-Phosphate Dehydrogenase From Plasmodium Falciparum At 2. 25 A Resolution Reveals Intriguing Extra Electron Density In The Active Site
Proteins V. 62 570 2006
PubMed-ID: 16345073  |  Reference-DOI: 10.1002/PROT.20801

(-) Compounds

Molecule 1 - GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE
    ChainsO, P, Q, R
    EC Number1.2.1.12
    EngineeredYES
    Expression SystemESCHERICHIA COLI
    Expression System PlasmidPET14B
    Expression System StrainBL21STAR(DE3)
    Expression System Taxid562
    Expression System Vector TypeT7 SYSTEM
    GenePF14_0598
    MutationYES
    Organism CommonMALARIA PARASITE P. FALCIPARUM
    Organism ScientificPLASMODIUM FALCIPARUM
    Organism Taxid5833

 Structural Features

(-) Chains, Units

  1234
Asymmetric/Biological Unit OPQR

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (3, 11)

Asymmetric/Biological Unit (3, 11)
No.NameCountTypeFull Name
1AES3Ligand/Ion4-(2-AMINOETHYL)BENZENESULFONYL FLUORIDE
2GOL4Ligand/IonGLYCEROL
3NAD4Ligand/IonNICOTINAMIDE-ADENINE-DINUCLEOTIDE

(-) Sites  (11, 11)

Asymmetric Unit (11, 11)
No.NameEvidenceResiduesDescription
01AC1SOFTWAREHOH P:767 , GLY Q:10 , PHE Q:11 , GLY Q:12 , ARG Q:13 , ILE Q:14 , ASP Q:35 , PRO Q:36 , PHE Q:37 , SER Q:98 , THR Q:99 , GLY Q:100 , PHE Q:102 , SER Q:122 , ALA Q:123 , CYS Q:153 , THR Q:183 , ALA Q:184 , ASN Q:319 , TYR Q:323 , HOH Q:513 , HOH Q:522 , HOH Q:523 , HOH Q:549 , HOH Q:550BINDING SITE FOR RESIDUE NAD Q 501
02AC2SOFTWAREASN P:9 , GLY P:10 , GLY P:12 , ARG P:13 , ILE P:14 , ASN P:34 , ASP P:35 , PRO P:36 , PHE P:37 , LYS P:80 , SER P:98 , THR P:99 , GLY P:100 , SER P:122 , ALA P:123 , CYS P:153 , ALA P:184 , ASN P:319 , TYR P:323 , AES P:602 , HOH P:707 , HOH P:711 , HOH P:720 , HOH P:727 , HOH P:732 , HOH P:740 , HOH P:754BINDING SITE FOR RESIDUE NAD P 701
03AC3SOFTWAREASN O:9 , GLY O:10 , PHE O:11 , GLY O:12 , ARG O:13 , ILE O:14 , ASN O:34 , ASP O:35 , PRO O:36 , PHE O:37 , MET O:38 , GLU O:79 , LYS O:80 , SER O:98 , THR O:99 , GLY O:100 , SER O:122 , ALA O:123 , CYS O:153 , ALA O:184 , ASN O:319 , TYR O:323 , AES O:601 , HOH O:812 , HOH O:829 , HOH O:842 , HOH O:847 , HOH O:853 , HOH R:963BINDING SITE FOR RESIDUE NAD O 801
04AC4SOFTWAREASN R:9 , GLY R:10 , GLY R:12 , ARG R:13 , ILE R:14 , ASN R:34 , ASP R:35 , PRO R:36 , PHE R:37 , GLU R:79 , LYS R:80 , SER R:98 , THR R:99 , GLY R:100 , PHE R:102 , SER R:122 , ALA R:123 , ALA R:184 , ASN R:319 , TYR R:323 , AES R:603 , HOH R:904 , HOH R:907 , HOH R:910 , HOH R:918 , HOH R:923 , HOH R:939 , HOH R:941 , HOH R:942BINDING SITE FOR RESIDUE NAD R 901
05AC5SOFTWARETHR O:183 , ASN O:185 , NAD O:801BINDING SITE FOR RESIDUE AES O 601
06AC6SOFTWARETHR P:183 , ASN P:185 , ARG P:237 , NAD P:701BINDING SITE FOR RESIDUE AES P 602
07AC7SOFTWARETHR R:183 , ASN R:185 , NAD R:901BINDING SITE FOR RESIDUE AES R 603
08AC8SOFTWAREGLY Q:196 , LYS Q:197 , ASP Q:198 , TRP Q:199 , GLU R:283BINDING SITE FOR RESIDUE GOL R 503
09AC9SOFTWAREGLU O:283 , GLY P:196 , ASP P:198 , TRP P:199BINDING SITE FOR RESIDUE GOL P 703
10BC1SOFTWAREASP O:292 , ASN O:293 , ARG O:294 , GLU R:71BINDING SITE FOR RESIDUE GOL O 804
11BC2SOFTWAREGLU Q:283 , ASP R:198 , TRP R:199BINDING SITE FOR RESIDUE GOL R 903

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 2B4R)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 2B4R)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 2B4R)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 2B4R)

(-) Exons   (0, 0)

(no "Exon" information available for 2B4R)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it)
Chain O from PDB  Type:PROTEIN  Length:334
 aligned with Q8T6B1_PLAFA | Q8T6B1 from UniProtKB/TrEMBL  Length:337

    Alignment length:334
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332    
         Q8T6B1_PLAFA     3 VTKLGINGFGRIGRLVFRAAFGRKDIEVVAINDPFMDLNHLCYLLKYDSVHGQFPCEVTHADGFLLIGEKKVSVFAEKDPSQIPWGKCQVDVVCESTGVFLTKELASSHLKGGAKKVIMSAPPKDDTPIYVMGINHHQYDTKQLIVSNASCTTNCLAPLAKVINDRFGIVEGLMTTVHASTANQLVVDGPSKGGKDWRAGRCALSNIIPASTGAAKAVGKVLPELNGKLTGVAFRVPIGTVSVVDLVCRLQKPAKYEEVALEIKKAAEGPLKGILGYTEDEVVSQDFVHDNRSSIFDMKAGLALNDNFFKLVSWYDNEWGYSNRVLDLAVHITN 336
               SCOP domains -d2b4ro1 O:4-152,O:319-335 Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)                                                                           d2b4ro2 O:153-318 Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)                                                                                                    d2b4ro1          - SCOP domains
               CATH domains 2b4rO01 O:3-150,O:320-336 NAD(P)-binding Rossmann-like Domain                                                                                       2b4rO02 O:151-319 Dihydrodipicolinate Reductase; domain 2                                                                                                                2b4rO01           CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeee..hhhhhhhhhhhhh...eeeeeee....hhhhhhhhhhh..........eeee..eeee...eeeee...hhhhhhhhhhh..eeee......hhhhhhhhhhh...eeee...............hhhhh.....eee..hhhhhhhhhhhhhhhhhhheeeeeeeeee............hhhhhhhhhhh......eeee.hhhhhhhhhhhhhh..eeeeeee......eeeeeeeee....hhhhhhhhhhhhhhh.....eeee....hhhhhh.....eeeeeeeeeeee..eeeeeeee..hhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2b4r O   3 ATKLGINGFGRIGRLVFRAAFGRKDIEVVAINDPFMDLNHLCYLLKYDSVHGQFPCEVTHADGFLLIGEKKVSVFAEKDPSQIPWGKCQVDVVCESTGVFLTKELASSHLKGGAKKVIMSAPPKDDTPIYVMGINHHQYDTKQLIVSNASCTTNCLAPLAKVINDRFGIVEGLMTTVHASTANQLVVDGPSKGGKDWRAGRCALSNIIPASTGAAKAVGKVLPELNGKLTGVAFRVPIGTVSVVDLVCRLQKPAKYEEVALEIKKAAEGPLKGILGYTEDEVVSQDFVHDNRSSIFDMKAGLALNDNFFKLVSWYDNEWGYSNRVLDLAVHITT 336
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332    

Chain P from PDB  Type:PROTEIN  Length:334
 aligned with Q8T6B1_PLAFA | Q8T6B1 from UniProtKB/TrEMBL  Length:337

    Alignment length:334
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332    
         Q8T6B1_PLAFA     3 VTKLGINGFGRIGRLVFRAAFGRKDIEVVAINDPFMDLNHLCYLLKYDSVHGQFPCEVTHADGFLLIGEKKVSVFAEKDPSQIPWGKCQVDVVCESTGVFLTKELASSHLKGGAKKVIMSAPPKDDTPIYVMGINHHQYDTKQLIVSNASCTTNCLAPLAKVINDRFGIVEGLMTTVHASTANQLVVDGPSKGGKDWRAGRCALSNIIPASTGAAKAVGKVLPELNGKLTGVAFRVPIGTVSVVDLVCRLQKPAKYEEVALEIKKAAEGPLKGILGYTEDEVVSQDFVHDNRSSIFDMKAGLALNDNFFKLVSWYDNEWGYSNRVLDLAVHITN 336
               SCOP domains d2b4rp1 P:3-152,P:319-336 Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)                                                                            d2b4rp2 P:153-318 Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)                                                                                                    d2b4rp1            SCOP domains
               CATH domains 2b4rP01 P:3-150,P:320-336 NAD(P)-binding Rossmann-like Domain                                                                                       2b4rP02 P:151-319 Dihydrodipicolinate Reductase; domain 2                                                                                                                2b4rP01           CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeee..hhhhhhhhhhhhh...eeeeeee....hhhhhhhhhhh...........eee..eee....eeeee...hhhhh.hhhhh..eeee......hhhhhhhhhhh...eeee...............hhhhh.....eee..hhhhhhhhhhhhhhhhhh.eeeeeeeeee............hhhhhhhhhhh......eeee.hhhhhhhhhhhhhh..eeeeeee......eeeeeeeee....hhhhhhhhhhhhhhh.....eeee....hhhhhh.....eeeeeeeeeeee..eeeeeeee..hhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2b4r P   3 ATKLGINGFGRIGRLVFRAAFGRKDIEVVAINDPFMDLNHLCYLLKYDSVHGQFPCEVTHADGFLLIGEKKVSVFAEKDPSQIPWGKCQVDVVCESTGVFLTKELASSHLKGGAKKVIMSAPPKDDTPIYVMGINHHQYDTKQLIVSNASCTTNCLAPLAKVINDRFGIVEGLMTTVHASTANQLVVDGPSKGGKDWRAGRCALSNIIPASTGAAKAVGKVLPELNGKLTGVAFRVPIGTVSVVDLVCRLQKPAKYEEVALEIKKAAEGPLKGILGYTEDEVVSQDFVHDNRSSIFDMKAGLALNDNFFKLVSWYDNEWGYSNRVLDLAVHITT 336
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332    

Chain Q from PDB  Type:PROTEIN  Length:334
 aligned with Q8T6B1_PLAFA | Q8T6B1 from UniProtKB/TrEMBL  Length:337

    Alignment length:334
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332    
         Q8T6B1_PLAFA     3 VTKLGINGFGRIGRLVFRAAFGRKDIEVVAINDPFMDLNHLCYLLKYDSVHGQFPCEVTHADGFLLIGEKKVSVFAEKDPSQIPWGKCQVDVVCESTGVFLTKELASSHLKGGAKKVIMSAPPKDDTPIYVMGINHHQYDTKQLIVSNASCTTNCLAPLAKVINDRFGIVEGLMTTVHASTANQLVVDGPSKGGKDWRAGRCALSNIIPASTGAAKAVGKVLPELNGKLTGVAFRVPIGTVSVVDLVCRLQKPAKYEEVALEIKKAAEGPLKGILGYTEDEVVSQDFVHDNRSSIFDMKAGLALNDNFFKLVSWYDNEWGYSNRVLDLAVHITN 336
               SCOP domains d2b4rq1 Q:3-152,Q:319-336 Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)                                                                            d2b4rq2 Q:153-318 Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)                                                                                                    d2b4rq1            SCOP domains
               CATH domains 2b4rQ01 Q:3-150,Q:320-336 NAD(P)-binding Rossmann-like Domain                                                                                       2b4rQ02 Q:151-319 Dihydrodipicolinate Reductase; domain 2                                                                                                                2b4rQ01           CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeee..hhhhhhhhhhhhhh..eeeeeee....hhhhhhhhhhh..........eeee..eeee..eeeeee................eeee......hhhhhhhhhhh...eeee...............hhhhh.....eee..hhhhhhhhhhhhhhhhhh.eeeeeeeeee............hhhhhhhhhhh......eeee.....hhhhhhhhhh..eeeeeee......eeeeeeeee....hhhhhhhhhhhhhhh.....eeee....hhhhhh.....eeeeeeeeee....eeeeeeee..hhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2b4r Q   3 ATKLGINGFGRIGRLVFRAAFGRKDIEVVAINDPFMDLNHLCYLLKYDSVHGQFPCEVTHADGFLLIGEKKVSVFAEKDPSQIPWGKCQVDVVCESTGVFLTKELASSHLKGGAKKVIMSAPPKDDTPIYVMGINHHQYDTKQLIVSNASCTTNCLAPLAKVINDRFGIVEGLMTTVHASTANQLVVDGPSKGGKDWRAGRCALSNIIPASTGAAKAVGKVLPELNGKLTGVAFRVPIGTVSVVDLVCRLQKPAKYEEVALEIKKAAEGPLKGILGYTEDEVVSQDFVHDNRSSIFDMKAGLALNDNFFKLVSWYDNEWGYSNRVLDLAVHITT 336
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332    

Chain R from PDB  Type:PROTEIN  Length:334
 aligned with Q8T6B1_PLAFA | Q8T6B1 from UniProtKB/TrEMBL  Length:337

    Alignment length:334
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332    
         Q8T6B1_PLAFA     3 VTKLGINGFGRIGRLVFRAAFGRKDIEVVAINDPFMDLNHLCYLLKYDSVHGQFPCEVTHADGFLLIGEKKVSVFAEKDPSQIPWGKCQVDVVCESTGVFLTKELASSHLKGGAKKVIMSAPPKDDTPIYVMGINHHQYDTKQLIVSNASCTTNCLAPLAKVINDRFGIVEGLMTTVHASTANQLVVDGPSKGGKDWRAGRCALSNIIPASTGAAKAVGKVLPELNGKLTGVAFRVPIGTVSVVDLVCRLQKPAKYEEVALEIKKAAEGPLKGILGYTEDEVVSQDFVHDNRSSIFDMKAGLALNDNFFKLVSWYDNEWGYSNRVLDLAVHITN 336
               SCOP domains d2b4rr1 R:3-152,R:319-336 Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)                                                                            d2b4rr2 R:153-318 Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)                                                                                                    d2b4rr1            SCOP domains
               CATH domains 2b4rR01 R:3-150,R:320-336 NAD(P)-binding Rossmann-like Domain                                                                                       2b4rR02 R:151-319 Dihydrodipicolinate Reductase; domain 2                                                                                                                2b4rR01           CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeee..hhhhhhhhhhhh....eeeeeee....hhhhhhhhhhh..........eeee..eeee..eeeeee...hhhhh.hhhhh..eeee......hhhhhhhhhhh...eeee...............hhhhh.....eee..hhhhhhhhhhhhhhhhhhheeeeeeeeee............hhhhhhhhhhh......eeee.hhhhhhhhhhhhhh..eeeeeee......eeeeeeeee....hhhhhhhhhhhhhhh.....eeee....hhhhhh.....eeee....eeee..eeeeeeee..hhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2b4r R   3 ATKLGINGFGRIGRLVFRAAFGRKDIEVVAINDPFMDLNHLCYLLKYDSVHGQFPCEVTHADGFLLIGEKKVSVFAEKDPSQIPWGKCQVDVVCESTGVFLTKELASSHLKGGAKKVIMSAPPKDDTPIYVMGINHHQYDTKQLIVSNASCTTNCLAPLAKVINDRFGIVEGLMTTVHASTANQLVVDGPSKGGKDWRAGRCALSNIIPASTGAAKAVGKVLPELNGKLTGVAFRVPIGTVSVVDLVCRLQKPAKYEEVALEIKKAAEGPLKGILGYTEDEVVSQDFVHDNRSSIFDMKAGLALNDNFFKLVSWYDNEWGYSNRVLDLAVHITT 336
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332    

   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (2, 8)

Asymmetric/Biological Unit

(-) CATH Domains  (2, 8)

Asymmetric/Biological Unit
(-)
Class: Alpha Beta (26913)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 2B4R)

(-) Gene Ontology  (9, 9)

Asymmetric/Biological Unit(hide GO term definitions)
Chain O,P,Q,R   (Q8T6B1_PLAFA | Q8T6B1)
molecular function
    GO:0051287    NAD binding    Interacting selectively and non-covalently with nicotinamide adenine dinucleotide, a coenzyme involved in many redox and biosynthetic reactions; binding may be to either the oxidized form, NAD+, or the reduced form, NADH.
    GO:0050661    NADP binding    Interacting selectively and non-covalently with nicotinamide-adenine dinucleotide phosphate, a coenzyme involved in many redox and biosynthetic reactions; binding may be to either the oxidized form, NADP+, or the reduced form, NADPH.
    GO:0004365    glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity    Catalysis of the reaction: D-glyceraldehyde 3-phosphate + phosphate + NAD+ = 3-phospho-D-glyceroyl phosphate + NADH + H+.
    GO:0000166    nucleotide binding    Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
    GO:0016491    oxidoreductase activity    Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
    GO:0016620    oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor    Catalysis of an oxidation-reduction (redox) reaction in which an aldehyde or ketone (oxo) group acts as a hydrogen or electron donor and reduces NAD or NADP.
biological process
    GO:0006006    glucose metabolic process    The chemical reactions and pathways involving glucose, the aldohexose gluco-hexose. D-glucose is dextrorotatory and is sometimes known as dextrose; it is an important source of energy for living organisms and is found free as well as combined in homo- and hetero-oligosaccharides and polysaccharides.
    GO:0006096    glycolytic process    The chemical reactions and pathways resulting in the breakdown of a carbohydrate into pyruvate, with the concomitant production of a small amount of ATP and the reduction of NAD(P) to NAD(P)H. Glycolysis begins with the metabolism of a carbohydrate to generate products that can enter the pathway and ends with the production of pyruvate. Pyruvate may be converted to acetyl-coenzyme A, ethanol, lactate, or other small molecules.
    GO:0055114    oxidation-reduction process    A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.

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  Q8T6B1_PLAFA | Q8T6B1
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/TrEMBL
        Q8T6B1_PLAFA | Q8T6B11ywg 2b4t

(-) Related Entries Specified in the PDB File

2b4t