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Summary Information (see also Sequences/Alignments below) |
Asymmetric Unit (3, 8)
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Asymmetric Unit (8, 8)
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(no "SS Bond" information available for 2V5X) |
Asymmetric Unit
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(no "PROSITE Motif" information available for 2V5X) |
Asymmetric Unit (11, 22)
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Asymmetric UnitChain A from PDB Type:PROTEIN Length:363 aligned with HDAC8_HUMAN | Q9BY41 from UniProtKB/Swiss-Prot Length:377 Alignment length:363 23 33 43 53 63 73 83 93 103 113 123 133 143 153 163 173 183 193 203 213 223 233 243 253 263 273 283 293 303 313 323 333 343 353 363 373 HDAC8_HUMAN 14 LVPVYIYSPEYVSMCDSLAKIPKRASMVHSLIEAYALHKQMRIVKPKVASMEEMATFHTDAYLQHLQKVSQEGDDDHPDSIEYGLGYDCPATEGIFDYAAAIGGATITAAQCLIDGMCKVAINWSGGWHHAKKDEASGFCYLNDAVLGILRLRRKFERILYVDLDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGTGDVSDVGLGKGRYYSVNVPIQDGIQDEKYYQICESVLKEVYQAFNPKAVVLQLGADTIAGDPMCSFNMTPVGIGKCLKYILQWQLATLILGGGGYNLANTARCWTYLTGVILGKTLSSEIPDHEFFTAYGPDYVLEITPSCRPDRNEPHRIQQILNYIKGNLKHV 376 SCOP domains d2v5xa_ A: automated matches SCOP domains CATH domains 2v5xA00 A:14-376 [code=3.40.800.20, no name defined] CATH domains Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------R----------------------------------------------------------------------------------------------------------------------------------M--------R-------------R------------------------------------------ SAPs(SNPs) PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE Transcript 1 (1) Exon 1.1a PDB: A:14-37 Exon 1.3a -------------------------------------------Exon 1.5a PDB: A:99-146 UniProt: 99-146 -------------------------------------Exon 1.7b PDB: A:184-210 -----------------------------------Exon 1.13b PDB: A:246-304 UniProt: 246-304 -------------------------------Exon 1.16b PDB: A:336-371 ----- Transcript 1 (1) Transcript 1 (2) -----------------------------------------Exon 1.4a PDB: A:55-99 UniProt: 55-99 ----------------------------------------------Exon 1.6b PDB: A:146-184 -------------------------Exon 1.9a PDB: A:210-246 ---------------------------------------------------------Exon 1.15c PDB: A:304-335 -----------------------------------1.18b Transcript 1 (2) 2v5x A 14 LVPVYIYSPEYVSMCDSLAKIPKRADMVHSLIEAYALHKQMRIVKPKVASMEEMATFHTDAYLQHLQKVSQEGDDDHPDSIEYGLGYDCPATEGIFDYAAAIGGATITAAQCLIDGMCKVAINWSGGWHHAKKDEASGFCYLNDAVLGILRLRRKFERILYVDLDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGTGDVSDVGLGKGRYYSVNVPIQDGIQDEKYYQICESVLKEVYQAFNPKAVVLQLGADTIAGDPMCSFNMTPVGIGKCLKYILQWQLATLILGGGGYNLANTARCWTYLTGVILGKTLSSEIPDHEFFTAYGPDYVLEITPSCRPDRNEPHRIQQILNYIKGNLKHV 376 23 33 43 53 63 73 83 93 103 113 123 133 143 153 163 173 183 193 203 213 223 233 243 253 263 273 283 293 303 313 323 333 343 353 363 373 Chain B from PDB Type:PROTEIN Length:356 aligned with HDAC8_HUMAN | Q9BY41 from UniProtKB/Swiss-Prot Length:377 Alignment length:363 23 33 43 53 63 73 83 93 103 113 123 133 143 153 163 173 183 193 203 213 223 233 243 253 263 273 283 293 303 313 323 333 343 353 363 373 HDAC8_HUMAN 14 LVPVYIYSPEYVSMCDSLAKIPKRASMVHSLIEAYALHKQMRIVKPKVASMEEMATFHTDAYLQHLQKVSQEGDDDHPDSIEYGLGYDCPATEGIFDYAAAIGGATITAAQCLIDGMCKVAINWSGGWHHAKKDEASGFCYLNDAVLGILRLRRKFERILYVDLDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGTGDVSDVGLGKGRYYSVNVPIQDGIQDEKYYQICESVLKEVYQAFNPKAVVLQLGADTIAGDPMCSFNMTPVGIGKCLKYILQWQLATLILGGGGYNLANTARCWTYLTGVILGKTLSSEIPDHEFFTAYGPDYVLEITPSCRPDRNEPHRIQQILNYIKGNLKHV 376 SCOP domains d2v5xb_ B: automated matches SCOP domains CATH domains 2v5xB00 B:14-376 [code=3.40.800.20, no name defined] CATH domains Pfam domains (1) -------Hist_deacetyl-2v5xB01 B:21-323 ----------------------------------------------------- Pfam domains (1) Pfam domains (2) -------Hist_deacetyl-2v5xB02 B:21-323 ----------------------------------------------------- Pfam domains (2) SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------R----------------------------------------------------------------------------------------------------------------------------------M--------R-------------R------------------------------------------ SAPs(SNPs) PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE Transcript 1 (1) Exon 1.1a PDB: B:14-37 Exon 1.3a -------------------------------------------Exon 1.5a PDB: B:99-146 UniProt: 99-146 -------------------------------------Exon 1.7b PDB: B:184-210 -----------------------------------Exon 1.13b PDB: B:246-304 UniProt: 246-304 -------------------------------Exon 1.16b PDB: B:336-371 ----- Transcript 1 (1) Transcript 1 (2) -----------------------------------------Exon 1.4a PDB: B:55-99 (gaps) UniProt: 55-99----------------------------------------------Exon 1.6b PDB: B:146-184 -------------------------Exon 1.9a PDB: B:210-246 ---------------------------------------------------------Exon 1.15c PDB: B:304-335 -----------------------------------1.18b Transcript 1 (2) 2v5x B 14 LVPVYIYSPEYVSMCDSLAKIPKRADMVHSLIEAYALHKQMRIVKPKVASMEEMATFHTDAYLQHLQKVSQEG-------IEYGLGYDCPATEGIFDYAAAIGGATITAAQCLIDGMCKVAINWSGGWHHAKKDEASGFCYLNDAVLGILRLRRKFERILYVDLDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGTGDVSDVGLGKGRYYSVNVPIQDGIQDEKYYQICESVLKEVYQAFNPKAVVLQLGADTIAGDPMCSFNMTPVGIGKCLKYILQWQLATLILGGGGYNLANTARCWTYLTGVILGKTLSSEIPDHEFFTAYGPDYVLEITPSCRPDRNEPHRIQQILNYIKGNLKHV 376 23 33 43 53 63 73 83 | -| 103 113 123 133 143 153 163 173 183 193 203 213 223 233 243 253 263 273 283 293 303 313 323 333 343 353 363 373 86 94
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Asymmetric Unit
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Asymmetric Unit
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Asymmetric Unit
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Asymmetric Unit(hide GO term definitions) Chain A,B (HDAC8_HUMAN | Q9BY41)
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