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Summary Information (see also Sequences/Alignments below) |
Asymmetric Unit (3, 15)
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Asymmetric Unit (15, 15)
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(no "SS Bond" information available for 3F0R) |
Asymmetric Unit
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(no "PROSITE Motif" information available for 3F0R) |
Asymmetric Unit (11, 33)
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Asymmetric UnitChain A from PDB Type:PROTEIN Length:364 aligned with HDAC8_HUMAN | Q9BY41 from UniProtKB/Swiss-Prot Length:377 Alignment length:366 377 22 32 42 52 62 72 82 92 102 112 122 132 142 152 162 172 182 192 202 212 222 232 242 252 262 272 282 292 302 312 322 332 342 352 362 372 | HDAC8_HUMAN 13 SLVPVYIYSPEYVSMCDSLAKIPKRASMVHSLIEAYALHKQMRIVKPKVASMEEMATFHTDAYLQHLQKVSQEGDDDHPDSIEYGLGYDCPATEGIFDYAAAIGGATITAAQCLIDGMCKVAINWSGGWHHAKKDEASGFCYLNDAVLGILRLRRKFERILYVDLDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGTGDVSDVGLGKGRYYSVNVPIQDGIQDEKYYQICESVLKEVYQAFNPKAVVLQLGADTIAGDPMCSFNMTPVGIGKCLKYILQWQLATLILGGGGYNLANTARCWTYLTGVILGKTLSSEIPDHEFFTAYGPDYVLEITPSCRPDRNEPHRIQQILNYIKGNLKHVV- - SCOP domains d3f0ra_ A: automate d matches SCOP domains CATH domains 3f0rA00 A:13-378 [ code=3.40.800.20, no name defined] CATH domains Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains SAPs(SNPs) -----------------------------------------------------------------------------------------------------------------------------------------------------------------------R----------------------------------------------------------------------------------------------------------------------------------M--------R-------------R-------------------------------------------- SAPs(SNPs) PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE Transcript 1 (1) Exon 1.1a UniProt: 1-37 Exon 1.3a -------------------------------------------Exon 1.5a PDB: A:99-146 UniProt: 99-146 -------------------------------------Exon 1.7b PDB: A:184-210 -----------------------------------Exon 1.13b PDB: A:246-304 UniProt: 246-304 -------------------------------Exon 1.16b PDB: A:336-371 ------- Transcript 1 (1) Transcript 1 (2) ------------------------------------------Exon 1.4a PDB: A:55-99 UniProt: 55-99 ----------------------------------------------Exon 1.6b PDB: A:146-184 -------------------------Exon 1.9a PDB: A:210-246 ---------------------------------------------------------Exon 1.15c PDB: A:304-335 -----------------------------------1.18b - Transcript 1 (2) 3f0r A 13 SLVPVYIYSPEYVSMCDSL--IPKRASMVHSLIEAYALHKQMRIVKPKVASMEEMATFHTDAYLQHLQKVSQEGDDDHPDSIEYGLGYDCPATEGIFDYAAAIGGATITAAQCLIDGMCKVAINWSGGWHHAKKDEASGFCYLNDAVLGILRLRRKFERILYVDLDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGTGDVSDVGLGKGRYYSVNVPIQDGIQDEKYYQICESVLKEVYQAFNPKAVVLQLGADTIAGDPMCSFNMTPVGIGKCLKYILQWQLATLILGGGGYNLANTARCWTYLTGVILGKTLSSEIPDHEFFTAYGPDYVLEITPSCRPDRNEPHRIQQILNYIKGNLKHVVI 378 22 |- | 42 52 62 72 82 92 102 112 122 132 142 152 162 172 182 192 202 212 222 232 242 252 262 272 282 292 302 312 322 332 342 352 362 372 31 34 Chain B from PDB Type:PROTEIN Length:366 aligned with HDAC8_HUMAN | Q9BY41 from UniProtKB/Swiss-Prot Length:377 Alignment length:366 377 22 32 42 52 62 72 82 92 102 112 122 132 142 152 162 172 182 192 202 212 222 232 242 252 262 272 282 292 302 312 322 332 342 352 362 372 | HDAC8_HUMAN 13 SLVPVYIYSPEYVSMCDSLAKIPKRASMVHSLIEAYALHKQMRIVKPKVASMEEMATFHTDAYLQHLQKVSQEGDDDHPDSIEYGLGYDCPATEGIFDYAAAIGGATITAAQCLIDGMCKVAINWSGGWHHAKKDEASGFCYLNDAVLGILRLRRKFERILYVDLDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGTGDVSDVGLGKGRYYSVNVPIQDGIQDEKYYQICESVLKEVYQAFNPKAVVLQLGADTIAGDPMCSFNMTPVGIGKCLKYILQWQLATLILGGGGYNLANTARCWTYLTGVILGKTLSSEIPDHEFFTAYGPDYVLEITPSCRPDRNEPHRIQQILNYIKGNLKHVV- - SCOP domains d3f0rb_ B: automated matches SCOP domains CATH domains 3f0rB00 B:13-378 [code=3.40.800.20, no name defined] CATH domains Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains SAPs(SNPs) -----------------------------------------------------------------------------------------------------------------------------------------------------------------------R----------------------------------------------------------------------------------------------------------------------------------M--------R-------------R-------------------------------------------- SAPs(SNPs) PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE Transcript 1 (1) Exon 1.1a PDB: B:13-37 Exon 1.3a -------------------------------------------Exon 1.5a PDB: B:99-146 UniProt: 99-146 -------------------------------------Exon 1.7b PDB: B:184-210 -----------------------------------Exon 1.13b PDB: B:246-304 UniProt: 246-304 -------------------------------Exon 1.16b PDB: B:336-371 ------- Transcript 1 (1) Transcript 1 (2) ------------------------------------------Exon 1.4a PDB: B:55-99 UniProt: 55-99 ----------------------------------------------Exon 1.6b PDB: B:146-184 -------------------------Exon 1.9a PDB: B:210-246 ---------------------------------------------------------Exon 1.15c PDB: B:304-335 -----------------------------------1.18b - Transcript 1 (2) 3f0r B 13 SLVPVYIYSPEYVSMCDSLAKIPKRASMVHSLIEAYALHKQMRIVKPKVASMEEMATFHTDAYLQHLQKVSQEGDDDHPDSIEYGLGYDCPATEGIFDYAAAIGGATITAAQCLIDGMCKVAINWSGGWHHAKKDEASGFCYLNDAVLGILRLRRKFERILYVDLDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGTGDVSDVGLGKGRYYSVNVPIQDGIQDEKYYQICESVLKEVYQAFNPKAVVLQLGADTIAGDPMCSFNMTPVGIGKCLKYILQWQLATLILGGGGYNLANTARCWTYLTGVILGKTLSSEIPDHEFFTAYGPDYVLEITPSCRPDRNEPHRIQQILNYIKGNLKHVVI 378 22 32 42 52 62 72 82 92 102 112 122 132 142 152 162 172 182 192 202 212 222 232 242 252 262 272 282 292 302 312 322 332 342 352 362 372 Chain C from PDB Type:PROTEIN Length:355 aligned with HDAC8_HUMAN | Q9BY41 from UniProtKB/Swiss-Prot Length:377 Alignment length:365 22 32 42 52 62 72 82 92 102 112 122 132 142 152 162 172 182 192 202 212 222 232 242 252 262 272 282 292 302 312 322 332 342 352 362 372 HDAC8_HUMAN 13 SLVPVYIYSPEYVSMCDSLAKIPKRASMVHSLIEAYALHKQMRIVKPKVASMEEMATFHTDAYLQHLQKVSQEGDDDHPDSIEYGLGYDCPATEGIFDYAAAIGGATITAAQCLIDGMCKVAINWSGGWHHAKKDEASGFCYLNDAVLGILRLRRKFERILYVDLDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGTGDVSDVGLGKGRYYSVNVPIQDGIQDEKYYQICESVLKEVYQAFNPKAVVLQLGADTIAGDPMCSFNMTPVGIGKCLKYILQWQLATLILGGGGYNLANTARCWTYLTGVILGKTLSSEIPDHEFFTAYGPDYVLEITPSCRPDRNEPHRIQQILNYIKGNLKHVV 377 SCOP domains d3f0rc_ C: automated matches SCOP domains CATH domains 3f0rC00 C:13-377 [code=3.40.800.20, no name defined] CATH domains Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains SAPs(SNPs) -----------------------------------------------------------------------------------------------------------------------------------------------------------------------R----------------------------------------------------------------------------------------------------------------------------------M--------R-------------R------------------------------------------- SAPs(SNPs) PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE Transcript 1 (1) Exon 1.1a PDB: C:13-37 Exon 1.3a -------------------------------------------Exon 1.5a PDB: C:99-146 UniProt: 99-146 -------------------------------------Exon 1.7b PDB: C:184-210 -----------------------------------Exon 1.13b PDB: C:246-304 UniProt: 246-304 -------------------------------Exon 1.16b PDB: C:336-371 ------ Transcript 1 (1) Transcript 1 (2) ------------------------------------------Exon 1.4a PDB: C:55-99 (gaps) UniProt: 55-99----------------------------------------------Exon 1.6b PDB: C:146-184 -------------------------Exon 1.9a PDB: C:210-246 ---------------------------------------------------------Exon 1.15c PDB: C:304-335 -----------------------------------1.18b Transcript 1 (2) 3f0r C 13 SLVPVYIYSPEYVSMCDSLAKIPKRASMVHSLIEAYALHKQMRIVKPKVASMEEMATFHTDAYLQHLQKVSQE----------YGLGYDCPATEGIFDYAAAIGGATITAAQCLIDGMCKVAINWSGGWHHAKKDEASGFCYLNDAVLGILRLRRKFERILYVDLDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGTGDVSDVGLGKGRYYSVNVPIQDGIQDEKYYQICESVLKEVYQAFNPKAVVLQLGADTIAGDPMCSFNMTPVGIGKCLKYILQWQLATLILGGGGYNLANTARCWTYLTGVILGKTLSSEIPDHEFFTAYGPDYVLEITPSCRPDRNEPHRIQQILNYIKGNLKHVV 377 22 32 42 52 62 72 82 | - | 102 112 122 132 142 152 162 172 182 192 202 212 222 232 242 252 262 272 282 292 302 312 322 332 342 352 362 372 85 96
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Asymmetric Unit
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Asymmetric Unit
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(no "Pfam Domain" information available for 3F0R) |
Asymmetric Unit(hide GO term definitions) Chain A,B,C (HDAC8_HUMAN | Q9BY41)
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