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Summary Information (see also Sequences/Alignments below) |
Asymmetric Unit (3, 12)
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Asymmetric Unit (12, 12)
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(no "SS Bond" information available for 3F07) |
Asymmetric Unit
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(no "PROSITE Motif" information available for 3F07) |
Asymmetric Unit (11, 33)
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Asymmetric UnitChain A from PDB Type:PROTEIN Length:366 aligned with HDAC8_HUMAN | Q9BY41 from UniProtKB/Swiss-Prot Length:377 Alignment length:366 377 22 32 42 52 62 72 82 92 102 112 122 132 142 152 162 172 182 192 202 212 222 232 242 252 262 272 282 292 302 312 322 332 342 352 362 372 | HDAC8_HUMAN 13 SLVPVYIYSPEYVSMCDSLAKIPKRASMVHSLIEAYALHKQMRIVKPKVASMEEMATFHTDAYLQHLQKVSQEGDDDHPDSIEYGLGYDCPATEGIFDYAAAIGGATITAAQCLIDGMCKVAINWSGGWHHAKKDEASGFCYLNDAVLGILRLRRKFERILYVDLDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGTGDVSDVGLGKGRYYSVNVPIQDGIQDEKYYQICESVLKEVYQAFNPKAVVLQLGADTIAGDPMCSFNMTPVGIGKCLKYILQWQLATLILGGGGYNLANTARCWTYLTGVILGKTLSSEIPDHEFFTAYGPDYVLEITPSCRPDRNEPHRIQQILNYIKGNLKHVV- - SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains CATH domains 3f07A00 A:13-378 [code=3.40.800.20, no name defined] CATH domains Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains SAPs(SNPs) -----------------------------------------------------------------------------------------------------------------------------------------------------------------------R----------------------------------------------------------------------------------------------------------------------------------M--------R-------------R-------------------------------------------- SAPs(SNPs) PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE Transcript 1 (1) Exon 1.1a PDB: A:13-37 Exon 1.3a -------------------------------------------Exon 1.5a PDB: A:99-146 UniProt: 99-146 -------------------------------------Exon 1.7b PDB: A:184-210 -----------------------------------Exon 1.13b PDB: A:246-304 UniProt: 246-304 -------------------------------Exon 1.16b PDB: A:336-371 ------- Transcript 1 (1) Transcript 1 (2) ------------------------------------------Exon 1.4a PDB: A:55-99 UniProt: 55-99 ----------------------------------------------Exon 1.6b PDB: A:146-184 -------------------------Exon 1.9a PDB: A:210-246 ---------------------------------------------------------Exon 1.15c PDB: A:304-335 -----------------------------------1.18b - Transcript 1 (2) 3f07 A 13 SLVPVYIYSPEYVSMCDSLAKIPKRASMVHSLIEAYALHKQMRIVKPKVASMEEMATFHTDAYLQHLQKVSQEGDDDHPDSIEYGLGYDCPATEGIFDYAAAIGGATITAAQCLIDGMCKVAINWSGGWHHAKKDEASGFCYLNDAVLGILRLRRKFERILYVDLDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGTGDVSDVGLGKGRYYSVNVPIQDGIQDEKYYQICESVLKEVYQAFNPKAVVLQLGADTIAGDPMCSFNMTPVGIGKCLKYILQWQLATLILGGGGYNLANTARCWTYLTGVILGKTLSSEIPDHEFFTAYGPDYVLEITPSCRPDRNEPHRIQQILNYIKGNLKHVVI 378 22 32 42 52 62 72 82 92 102 112 122 132 142 152 162 172 182 192 202 212 222 232 242 252 262 272 282 292 302 312 322 332 342 352 362 372 Chain B from PDB Type:PROTEIN Length:368 aligned with HDAC8_HUMAN | Q9BY41 from UniProtKB/Swiss-Prot Length:377 Alignment length:368 377 22 32 42 52 62 72 82 92 102 112 122 132 142 152 162 172 182 192 202 212 222 232 242 252 262 272 282 292 302 312 322 332 342 352 362 372 | HDAC8_HUMAN 13 SLVPVYIYSPEYVSMCDSLAKIPKRASMVHSLIEAYALHKQMRIVKPKVASMEEMATFHTDAYLQHLQKVSQEGDDDHPDSIEYGLGYDCPATEGIFDYAAAIGGATITAAQCLIDGMCKVAINWSGGWHHAKKDEASGFCYLNDAVLGILRLRRKFERILYVDLDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGTGDVSDVGLGKGRYYSVNVPIQDGIQDEKYYQICESVLKEVYQAFNPKAVVLQLGADTIAGDPMCSFNMTPVGIGKCLKYILQWQLATLILGGGGYNLANTARCWTYLTGVILGKTLSSEIPDHEFFTAYGPDYVLEITPSCRPDRNEPHRIQQILNYIKGNLKHVV--- - SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains CATH domains 3f07B00 B:13-380 [code=3.40.800.20, no name defined] CATH domains Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains SAPs(SNPs) -----------------------------------------------------------------------------------------------------------------------------------------------------------------------R----------------------------------------------------------------------------------------------------------------------------------M--------R-------------R---------------------------------------------- SAPs(SNPs) PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE Transcript 1 (1) Exon 1.1a PDB: B:13-37 Exon 1.3a -------------------------------------------Exon 1.5a PDB: B:99-146 UniProt: 99-146 -------------------------------------Exon 1.7b PDB: B:184-210 -----------------------------------Exon 1.13b PDB: B:246-304 UniProt: 246-304 -------------------------------Exon 1.16b PDB: B:336-371 --------- Transcript 1 (1) Transcript 1 (2) ------------------------------------------Exon 1.4a PDB: B:55-99 UniProt: 55-99 ----------------------------------------------Exon 1.6b PDB: B:146-184 -------------------------Exon 1.9a PDB: B:210-246 ---------------------------------------------------------Exon 1.15c PDB: B:304-335 -----------------------------------1.18b --- Transcript 1 (2) 3f07 B 13 SLVPVYIYSPEYVSMCDSLAKIPKRASMVHSLIEAYALHKQMRIVKPKVASMEEMATFHTDAYLQHLQKVSQEGDDDHPDSIEYGLGYDCPATEGIFDYAAAIGGATITAAQCLIDGMCKVAINWSGGWHHAKKDEASGFCYLNDAVLGILRLRRKFERILYVDLDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGTGDVSDVGLGKGRYYSVNVPIQDGIQDEKYYQICESVLKEVYQAFNPKAVVLQLGADTIAGDPMCSFNMTPVGIGKCLKYILQWQLATLILGGGGYNLANTARCWTYLTGVILGKTLSSEIPDHEFFTAYGPDYVLEITPSCRPDRNEPHRIQQILNYIKGNLKHVVIEG 380 22 32 42 52 62 72 82 92 102 112 122 132 142 152 162 172 182 192 202 212 222 232 242 252 262 272 282 292 302 312 322 332 342 352 362 372 Chain C from PDB Type:PROTEIN Length:340 aligned with HDAC8_HUMAN | Q9BY41 from UniProtKB/Swiss-Prot Length:377 Alignment length:364 22 32 42 52 62 72 82 92 102 112 122 132 142 152 162 172 182 192 202 212 222 232 242 252 262 272 282 292 302 312 322 332 342 352 362 372 HDAC8_HUMAN 13 SLVPVYIYSPEYVSMCDSLAKIPKRASMVHSLIEAYALHKQMRIVKPKVASMEEMATFHTDAYLQHLQKVSQEGDDDHPDSIEYGLGYDCPATEGIFDYAAAIGGATITAAQCLIDGMCKVAINWSGGWHHAKKDEASGFCYLNDAVLGILRLRRKFERILYVDLDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGTGDVSDVGLGKGRYYSVNVPIQDGIQDEKYYQICESVLKEVYQAFNPKAVVLQLGADTIAGDPMCSFNMTPVGIGKCLKYILQWQLATLILGGGGYNLANTARCWTYLTGVILGKTLSSEIPDHEFFTAYGPDYVLEITPSCRPDRNEPHRIQQILNYIKGNLKHV 376 SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains CATH domains 3f07C00 C:13-376 [code=3.40.800.20, no name defined] CATH domains Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains SAPs(SNPs) -----------------------------------------------------------------------------------------------------------------------------------------------------------------------R----------------------------------------------------------------------------------------------------------------------------------M--------R-------------R------------------------------------------ SAPs(SNPs) PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE Transcript 1 (1) Exon 1.1a PDB: C:13-37 Exon 1.3a -------------------------------------------Exon 1.5a PDB: C:108-146 UniProt: 99-146 -------------------------------------Exon 1.7b PDB: C:184-210 -----------------------------------Exon 1.13b PDB: C:246-304 UniProt: 246-304 -------------------------------Exon 1.16b PDB: C:336-371 ----- Transcript 1 (1) Transcript 1 (2) ------------------------------------------Exon 1.4a PDB: C:55-83 UniProt: 55-99 ----------------------------------------------Exon 1.6b PDB: C:146-184 -------------------------Exon 1.9a PDB: C:210-246 ---------------------------------------------------------Exon 1.15c PDB: C:304-335 -----------------------------------1.18b Transcript 1 (2) 3f07 C 13 SLVPVYIYSPEYVSMCDSLAKIPKRASMVHSLIEAYALHKQMRIVKPKVASMEEMATFHTDAYLQHLQKVS------------------------IFDYAAAIGGATITAAQCLIDGMCKVAINWSGGWHHAKKDEASGFCYLNDAVLGILRLRRKFERILYVDLDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGTGDVSDVGLGKGRYYSVNVPIQDGIQDEKYYQICESVLKEVYQAFNPKAVVLQLGADTIAGDPMCSFNMTPVGIGKCLKYILQWQLATLILGGGGYNLANTARCWTYLTGVILGKTLSSEIPDHEFFTAYGPDYVLEITPSCRPDRNEPHRIQQILNYIKGNLKHV 376 22 32 42 52 62 72 82| - - | 112 122 132 142 152 162 172 182 192 202 212 222 232 242 252 262 272 282 292 302 312 322 332 342 352 362 372 83 108
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(no "SCOP Domain" information available for 3F07) |
Asymmetric Unit
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(no "Pfam Domain" information available for 3F07) |
Asymmetric Unit(hide GO term definitions) Chain A,B,C (HDAC8_HUMAN | Q9BY41)
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