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Summary Information (see also Sequences/Alignments below) |
Asymmetric Unit (3, 8)
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Asymmetric Unit (8, 8)
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(no "SS Bond" information available for 1W22) |
Asymmetric Unit
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(no "PROSITE Motif" information available for 1W22) |
Asymmetric Unit (11, 22)
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Asymmetric UnitChain A from PDB Type:PROTEIN Length:353 aligned with HDAC8_HUMAN | Q9BY41 from UniProtKB/Swiss-Prot Length:377 Alignment length:363 22 32 42 52 62 72 82 92 102 112 122 132 142 152 162 172 182 192 202 212 222 232 242 252 262 272 282 292 302 312 322 332 342 352 362 372 HDAC8_HUMAN 13 SLVPVYIYSPEYVSMCDSLAKIPKRASMVHSLIEAYALHKQMRIVKPKVASMEEMATFHTDAYLQHLQKVSQEGDDDHPDSIEYGLGYDCPATEGIFDYAAAIGGATITAAQCLIDGMCKVAINWSGGWHHAKKDEASGFCYLNDAVLGILRLRRKFERILYVDLDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGTGDVSDVGLGKGRYYSVNVPIQDGIQDEKYYQICESVLKEVYQAFNPKAVVLQLGADTIAGDPMCSFNMTPVGIGKCLKYILQWQLATLILGGGGYNLANTARCWTYLTGVILGKTLSSEIPDHEFFTAYGPDYVLEITPSCRPDRNEPHRIQQILNYIKGNLKH 375 SCOP domains d1w22a_ A: Histone deacetylase 8, HDAC8 SCOP domains CATH domains 1w22A00 A:13-375 [code=3.40.800.20, no name defined] CATH domains Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains SAPs(SNPs) -----------------------------------------------------------------------------------------------------------------------------------------------------------------------R----------------------------------------------------------------------------------------------------------------------------------M--------R-------------R----------------------------------------- SAPs(SNPs) PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE Transcript 1 (1) Exon 1.1a PDB: A:13-37 Exon 1.3a -------------------------------------------Exon 1.5a PDB: A:99-146 UniProt: 99-146 -------------------------------------Exon 1.7b PDB: A:184-210 -----------------------------------Exon 1.13b PDB: A:246-304 UniProt: 246-304 -------------------------------Exon 1.16b PDB: A:336-371 ---- Transcript 1 (1) Transcript 1 (2) ------------------------------------------Exon 1.4a PDB: A:55-99 (gaps) UniProt: 55-99----------------------------------------------Exon 1.6b PDB: A:146-184 -------------------------Exon 1.9a PDB: A:210-246 ---------------------------------------------------------Exon 1.15c PDB: A:304-335 -----------------------------------1.18b Transcript 1 (2) 1w22 A 13 SLVPVYIYSPEYVSMCDSLAKIPKRASMVHSLIEAYALHKQMRIVKPKVASMEEMATFHTDAYLQHLQKVSQ----------EYGLGYDCPATEGIFDYAAAIGGATITAAQCLIDGMCKVAINWSGGWHHAKKDEASGFCYLNDAVLGILRLRRKFERILYVDLDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGTGDVSDVGLGKGRYYSVNVPIQDGIQDEKYYQICESVLKEVYQAFNPKAVVLQLGADTIAGDPMCSFNMTPVGIGKCLKYILQWQLATLILGGGGYNLANTARCWTYLTGVILGKTLSSEIPDHEFFTAYGPDYVLEITPSCRPDRNEPHRIQQILNYIKGNLKH 375 22 32 42 52 62 72 82 | - | 102 112 122 132 142 152 162 172 182 192 202 212 222 232 242 252 262 272 282 292 302 312 322 332 342 352 362 372 84 95 Chain B from PDB Type:PROTEIN Length:351 aligned with HDAC8_HUMAN | Q9BY41 from UniProtKB/Swiss-Prot Length:377 Alignment length:361 24 34 44 54 64 74 84 94 104 114 124 134 144 154 164 174 184 194 204 214 224 234 244 254 264 274 284 294 304 314 324 334 344 354 364 374 HDAC8_HUMAN 15 VPVYIYSPEYVSMCDSLAKIPKRASMVHSLIEAYALHKQMRIVKPKVASMEEMATFHTDAYLQHLQKVSQEGDDDHPDSIEYGLGYDCPATEGIFDYAAAIGGATITAAQCLIDGMCKVAINWSGGWHHAKKDEASGFCYLNDAVLGILRLRRKFERILYVDLDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGTGDVSDVGLGKGRYYSVNVPIQDGIQDEKYYQICESVLKEVYQAFNPKAVVLQLGADTIAGDPMCSFNMTPVGIGKCLKYILQWQLATLILGGGGYNLANTARCWTYLTGVILGKTLSSEIPDHEFFTAYGPDYVLEITPSCRPDRNEPHRIQQILNYIKGNLKH 375 SCOP domains d1w22b_ B: Histone deacetylase 8, HDAC8 SCOP domains CATH domains 1w22B00 B:15-375 [code=3.40.800.20, no name defined] CATH domains Pfam domains (1) ------Hist_deacetyl-1w22B01 B:21-323 ---------------------------------------------------- Pfam domains (1) Pfam domains (2) ------Hist_deacetyl-1w22B02 B:21-323 ---------------------------------------------------- Pfam domains (2) SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------R----------------------------------------------------------------------------------------------------------------------------------M--------R-------------R----------------------------------------- SAPs(SNPs) PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE Transcript 1 (1) Exon 1.1a PDB: B:15-37Exon 1.3a -------------------------------------------Exon 1.5a PDB: B:99-146 UniProt: 99-146 -------------------------------------Exon 1.7b PDB: B:184-210 -----------------------------------Exon 1.13b PDB: B:246-304 UniProt: 246-304 -------------------------------Exon 1.16b PDB: B:336-371 ---- Transcript 1 (1) Transcript 1 (2) ----------------------------------------Exon 1.4a PDB: B:55-99 (gaps) UniProt: 55-99----------------------------------------------Exon 1.6b PDB: B:146-184 -------------------------Exon 1.9a PDB: B:210-246 ---------------------------------------------------------Exon 1.15c PDB: B:304-335 -----------------------------------1.18b Transcript 1 (2) 1w22 B 15 VPVYIYSPEYVSMCDSLAKIPKRASMVHSLIEAYALHKQMRIVKPKVASMEEMATFHTDAYLQHLQKVSQE----------YGLGYDCPATEGIFDYAAAIGGATITAAQCLIDGMCKVAINWSGGWHHAKKDEASGFCYLNDAVLGILRLRRKFERILYVDLDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGTGDVSDVGLGKGRYYSVNVPIQDGIQDEKYYQICESVLKEVYQAFNPKAVVLQLGADTIAGDPMCSFNMTPVGIGKCLKYILQWQLATLILGGGGYNLANTARCWTYLTGVILGKTLSSEIPDHEFFTAYGPDYVLEITPSCRPDRNEPHRIQQILNYIKGNLKH 375 24 34 44 54 64 74 84| - | 104 114 124 134 144 154 164 174 184 194 204 214 224 234 244 254 264 274 284 294 304 314 324 334 344 354 364 374 85 96
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Asymmetric Unit
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Asymmetric Unit
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Asymmetric Unit
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Asymmetric Unit(hide GO term definitions) Chain A,B (HDAC8_HUMAN | Q9BY41)
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