Chain A from PDB Type:PROTEIN Length:856
aligned with DPOL_BPR69 | Q38087 from UniProtKB/Swiss-Prot Length:903
Alignment length:902
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 610 620 630 640 650 660 670 680 690 700 710 720 730 740 750 760 770 780 790 800 810 820 830 840 850 860 870 880 890 900
DPOL_BPR69 1 MKEFYLTVEQIGDSIFERYIDSNGRERTREVEYKPSLFAHCPESQATKYFDIYGKPCTRKLFANMRDASQWIKRMEDIGLEALGMDDFKLAYLSDTYNYEIKYDHTKIRVANFDIEVTSPDGFPEPSQAKHPIDAITHYDSIDDRFYVFDLLNSPYGNVEEWSIEIAAKLQEQGGDEVPSEIIDKIIYMPFDNEKELLMEYLNFWQQKTPVILTGWNVESFDIPYVYNRIKNIFGESTAKRLSPHRKTRVKVIENMYGSREIITLFGISVLDYIDLYKKFSFTNQPSYSLDYISEFELNVGKLKYDGPISKLRESNHQRYISYNIIDVYRVLQIDAKRQFINLSLDMGYYAKIQIQSVFSPIKTWDAIIFNSLKEQNKVIPQGRSHPVQPYPGAFVKEPIPNRYKYVMSFDLTSLYPSIIRQVNISPETIAGTFKVAPLHDYINAVAERPSDVYSCSPNGMMYYKDRDGVVPTEITKVFNQRKEHKGYMLAAQRNGEIIKEALHNPNLSVDEPLDVDYRFDFSDEIKEKIKKLSAKSLNEMLFRAQRTEVAGMTAQINRKLLINSLYGALGNVWFRYYDLRNATAITTFGQMALQWIERKVNEYLNEVCGTEGEAFVLYGDTDSIYVSADKIIDKVGESKFRDTNHWVDFLDKFARERMEPAIDRGFREMCEYMNNKQHLMFMDREAIAGPPLGSKGIGGFWTGKKRYALNVWDMEGTRYAEPKLKIMGLETQKSSTPKAVQKALKECIRRMLQEGEESLQEYFKEFEKEFRQLNYISIASVSSANNIAKYDVGGFPGPKCPFHIRGILTYNRAIKGNIDAPQVVEGEKVYVLPLREGNPFGDKCIAWPSGTEITDLIKDDVLHWMDYTVLLEKTFIKPLEGFTSAAKLDYEKKASLFDMFD 902
SCOP domains d2p5oa1 A:1-375 Exonuclease domain of family B DNA polymerases d2p5oa2 A:376-902 Family B DNA polymerase SCOP domains
CATH domains -----------------------------------------------------------------------------------------------------------2p5oA02 A:108-339 [code=3.30.420.10, no name defined] ---------------------------------------------------------------------------------------------------------------------------------2p5oA04 A:469-572 Helix ha irpin bin ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ...eeeeeeee..eeeeeee.....eeeeee....eeeee.........ee.....eeeee..hhhhhhhhhhhhhhhh.......hhhhhhhhhhh......hhhhh.eeeeeee..................eeeeee....eeeeeee.ee..ee....hhhhhhh.........hhhhhh.eeeeee.hhhhhhhhhhhhhhhh...eee......hhhhhhhhhhhhhhhhhhhhhhh....eeeeee......eeeeee...ee.hhhhhhhhhh.......hhhhhhhhhhh........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhh..ee......................eee..eeeeee.hhhhhhhhhhh.hhh.eeee....hhhhhhh..........ee....eee.....hhhhhhhhhhhhhhhhhhhhhhhh..----------------------------------------------.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.......eeee...eeeeehhhhhhh.hhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.......eeeeeee..........eeeee..eeeeeeeee..eeeeeeeeeee.hhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhheeee...hhhhh.........hhhhhhhhhhhhhhh............eeeeee..........eeeee...........hhhhhhhhhhhhhhhhhhhhhhhhhhhh.............. Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DNA_POLYM----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
2p5o A 1 mKEFYLTVEQIGDSIFERYIDSNGRERTREVEYKPSLFAHCPESQATKYFDIYGKPCTRKLFANmRDASQWIKRmEDIGLEALGmDDFKLAYLSDTYNYEIKYDHTKIRVANFDIEVTSPDGFPEPSQAKHPIDAITHYDSIDDRFYVFDLLNSPYGNVEEWSIEIAAKLQEQGGDEVPSEIIDKIIYmPFDNEKELLmEYLNFWQQKTPVILTGWNVESFAIPYVYNRIKNIFGESTAKRLSPHRKTRVKVIENmYGSREIITLFGISVLDYIDLYKKFSFTNQPSYSLDYISEFELNVGKLKYDGPISKLRESNHQRYISYNIIAVYRVLQIDAKRQFINLSLDmGYYAKIQIQSVFSPIKTWDAIIFNSLKEQNKVIPQGRSHPVQPYPGAFVKEPIPNRYKYVmSFDLTSLYPSIIRQVNISPETIAGTFKVAPLHDYINAVAERPSDVYSCSPNGmmYYKDRDGVVPTEITKVFNQRKEHKGYmLAAQR----------------------------------------------mLFRAQRTEVAGmTAQINRKLLINSLYGALGNVWFRYYDLRNATAITTFGQmALQWIERKVNEYLNEVCGTEGEAFVLYGDTDSIYVSADKIIDKVGESKFRDTNHWVDFLDKFARERmEPAIDRGFREmCEYmNNKQHLmFmDREAIAGPPLGSKGIGGFWTGKKRYALNVWDmEGTRYAEPKLKImGLETQKSSTPKAVQKALKECIRRmLQEGEESLQEYFKEFEKEFRQLNYISIASVSSANNIAKYDVGGFPGPKCPFHIRGILTYNRAIKGNIDAPQVVEGEKVYVLPLREGNPFGDKCIAWPSGTEITDLIKDDVLHWmDYTVLLEKTFIKPLEGFTSAAKLDYEKKASLFDmFD 902
| 10 20 30 40 50 60 | 70 | 80 | 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 | 260 270 280 290 300 310 320 330 340 |350 360 370 380 390 400 410 420 430 440 450 460|| 470 480 490 | - - - - -| 550 | 560 570 580 590 | 600 610 620 630 640 650 660 670 | 680| | 690 700 710 | 720 730 740 750 | 760 770 780 790 800 810 820 830 840 850 860 | 870 880 890 900
| 65-MSE 75-MSE 85-MSE 189-MSE 199-MSE 256-MSE 347-MSE 408-MSE 461-MSE 489-MSE4 541-MSE 553-MSE 592-MSE 659-MSE 670-MSE | | 715-MSE 728-MSE 752-MSE 866-MSE 900-MSE
1-MSE 462-MSE 674-MSE | |
681-MSE
683-MSE
Chain B from PDB Type:PROTEIN Length:771
aligned with DPOL_BPR69 | Q38087 from UniProtKB/Swiss-Prot Length:903
Alignment length:901
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 610 620 630 640 650 660 670 680 690 700 710 720 730 740 750 760 770 780 790 800 810 820 830 840 850 860 870 880 890 900
DPOL_BPR69 1 MKEFYLTVEQIGDSIFERYIDSNGRERTREVEYKPSLFAHCPESQATKYFDIYGKPCTRKLFANMRDASQWIKRMEDIGLEALGMDDFKLAYLSDTYNYEIKYDHTKIRVANFDIEVTSPDGFPEPSQAKHPIDAITHYDSIDDRFYVFDLLNSPYGNVEEWSIEIAAKLQEQGGDEVPSEIIDKIIYMPFDNEKELLMEYLNFWQQKTPVILTGWNVESFDIPYVYNRIKNIFGESTAKRLSPHRKTRVKVIENMYGSREIITLFGISVLDYIDLYKKFSFTNQPSYSLDYISEFELNVGKLKYDGPISKLRESNHQRYISYNIIDVYRVLQIDAKRQFINLSLDMGYYAKIQIQSVFSPIKTWDAIIFNSLKEQNKVIPQGRSHPVQPYPGAFVKEPIPNRYKYVMSFDLTSLYPSIIRQVNISPETIAGTFKVAPLHDYINAVAERPSDVYSCSPNGMMYYKDRDGVVPTEITKVFNQRKEHKGYMLAAQRNGEIIKEALHNPNLSVDEPLDVDYRFDFSDEIKEKIKKLSAKSLNEMLFRAQRTEVAGMTAQINRKLLINSLYGALGNVWFRYYDLRNATAITTFGQMALQWIERKVNEYLNEVCGTEGEAFVLYGDTDSIYVSADKIIDKVGESKFRDTNHWVDFLDKFARERMEPAIDRGFREMCEYMNNKQHLMFMDREAIAGPPLGSKGIGGFWTGKKRYALNVWDMEGTRYAEPKLKIMGLETQKSSTPKAVQKALKECIRRMLQEGEESLQEYFKEFEKEFRQLNYISIASVSSANNIAKYDVGGFPGPKCPFHIRGILTYNRAIKGNIDAPQVVEGEKVYVLPLREGNPFGDKCIAWPSGTEITDLIKDDVLHWMDYTVLLEKTFIKPLEGFTSAAKLDYEKKASLFDMF 901
SCOP domains d2p5ob1 B:1-375 Exonuclease domain of family B DNA polymerases d2p5ob2 B:376-901 Family B DNA polymerase SCOP domains
CATH domains ------------------------------------------------------------------------------------------------------------2p5oB02 B:109-341 [code=3.30.420.10, no name defined] ---------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------- CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ...eeeeeeee..eeeeeee.....eeeeee....eeeee.........ee.....eeeee..hhhhhhhhhhhhhhhh.......hhhhhhhhhhh.......................................eeee....eeee....ee..ee..................................hhhhhhhhhhhhhhhh............hhhhhhhhhhhhhh...hhhhhh....eeee.....----.eeee......hhhhhhhh...........hhhhhhhh............hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhh.ee......................eee..eeeeee.hhhhhhhhhhh.....eeee....hhhhhhh..........ee....eee.....hhhhhhhhhhhhhhhhhhhhhhhhhh.---------------------------------------------........hhhhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.......eeee...eeeeehhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.......eeeeeee..........eeeee..eeeeeeeee..eeeeeeeeeee.........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.....---------------------------------------------------------------------------------......hhhhhhhhhhhhhhhhhhhhhh.......hhhhhh Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DNA_POLYM---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
2p5o B 1 mKEFYLTVEQIGDSIFERYIDSNGRERTREVEYKPSLFAHCPESQATKYFDIYGKPCTRKLFANmRDASQWIKRmEDIGLEALGmDDFKLAYLSDTYNYEIKYDHTKIRVANFDIEVTSPDGFPEPSQAKHPIDAITHYDSIDDRFYVFDLLNSPYGNVEEWSIEIAAKLQEQGGDEVPSEIIDKIIYmPFDNEKELLmEYLNFWQQKTPVILTGWNVESFAIPYVYNRIKNIFGESTAKRLSPHRKTRVKVIENm----EIITLFGISVLDYIDLYKKFSFTNQPSYSLDYISEFELNVGKLKYDGPISKLRESNHQRYISYNIIAVYRVLQIDAKRQFINLSLDmGYYAKIQIQSVFSPIKTWDAIIFNSLKEQNKVIPQGRSHPVQPYPGAFVKEPIPNRYKYVmSFDLTSLYPSIIRQVNISPETIAGTFKVAPLHDYINAVAERPSDVYSCSPNGmmYYKDRDGVVPTEITKVFNQRKEHKGYmLAAQRN---------------------------------------------mLFRAQRTEVAGmTAQINRKLLINSLYGALGNVWFRYYDLRNATAITTFGQmALQWIERKVNEYLNEVCGTEGEAFVLYGDTDSIYVSADKIIDKVGESKFRDTNHWVDFLDKFARERmEPAIDRGFREmCEYmNNKQHLmFmDREAIAGPPLGSKGIGGFWTGKKRYALNVWDmEGTRYAEPKLKImGLETQKSSTPKAVQKALKECIRRmLQEGEESLQEYFKEFEKEFRQLNYISI---------------------------------------------------------------------------------DVLHWmDYTVLLEKTFIKPLEGFTSAAKLDYEKKASLFDmF 901
| 10 20 30 40 50 60 | 70 | 80 | 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 | -| 270 280 290 300 310 320 330 340 |350 360 370 380 390 400 410 420 430 440 450 460|| 470 480 490 | - - - - -| 550 | 560 570 580 590 | 600 610 620 630 640 650 660 670 | 680| | 690 700 710 | 720 730 740 750 | 760 770 |- - - - - - - - -| | 870 880 890 900
| 65-MSE 75-MSE 85-MSE 189-MSE 199-MSE 256-MSE1 347-MSE 408-MSE 461-MSE 489-MSE95 541-MSE 553-MSE 592-MSE 659-MSE 670-MSE | | 715-MSE 728-MSE 752-MSE 779 861 | 900-MSE
1-MSE 462-MSE 674-MSE | | 866-MSE
681-MSE
683-MSE
Chain C from PDB Type:PROTEIN Length:853
aligned with DPOL_BPR69 | Q38087 from UniProtKB/Swiss-Prot Length:903
Alignment length:898
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 610 620 630 640 650 660 670 680 690 700 710 720 730 740 750 760 770 780 790 800 810 820 830 840 850 860 870 880 890
DPOL_BPR69 1 MKEFYLTVEQIGDSIFERYIDSNGRERTREVEYKPSLFAHCPESQATKYFDIYGKPCTRKLFANMRDASQWIKRMEDIGLEALGMDDFKLAYLSDTYNYEIKYDHTKIRVANFDIEVTSPDGFPEPSQAKHPIDAITHYDSIDDRFYVFDLLNSPYGNVEEWSIEIAAKLQEQGGDEVPSEIIDKIIYMPFDNEKELLMEYLNFWQQKTPVILTGWNVESFDIPYVYNRIKNIFGESTAKRLSPHRKTRVKVIENMYGSREIITLFGISVLDYIDLYKKFSFTNQPSYSLDYISEFELNVGKLKYDGPISKLRESNHQRYISYNIIDVYRVLQIDAKRQFINLSLDMGYYAKIQIQSVFSPIKTWDAIIFNSLKEQNKVIPQGRSHPVQPYPGAFVKEPIPNRYKYVMSFDLTSLYPSIIRQVNISPETIAGTFKVAPLHDYINAVAERPSDVYSCSPNGMMYYKDRDGVVPTEITKVFNQRKEHKGYMLAAQRNGEIIKEALHNPNLSVDEPLDVDYRFDFSDEIKEKIKKLSAKSLNEMLFRAQRTEVAGMTAQINRKLLINSLYGALGNVWFRYYDLRNATAITTFGQMALQWIERKVNEYLNEVCGTEGEAFVLYGDTDSIYVSADKIIDKVGESKFRDTNHWVDFLDKFARERMEPAIDRGFREMCEYMNNKQHLMFMDREAIAGPPLGSKGIGGFWTGKKRYALNVWDMEGTRYAEPKLKIMGLETQKSSTPKAVQKALKECIRRMLQEGEESLQEYFKEFEKEFRQLNYISIASVSSANNIAKYDVGGFPGPKCPFHIRGILTYNRAIKGNIDAPQVVEGEKVYVLPLREGNPFGDKCIAWPSGTEITDLIKDDVLHWMDYTVLLEKTFIKPLEGFTSAAKLDYEKKASLF 898
SCOP domains d2p5oc1 C:1-375 Exonuclease domain of family B DNA polymerases d2p5oc2 C:376-898 Family B DNA polymerase SCOP domains
CATH domains -----------------------------------------------------------------------------------------------------------2p5oC02 C:108-339 [code=3.30.420.10, no name defined] ---------------------------------------------------------------------------------------------------------------------------------2p5oC04 C:469-572 Helix hai rpin bin -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ...eeeeeee....eeeeee.....eeeeee....eeeee.........ee.....eeeee..hhhhhhhhhhhhhhh........hhhhhhhhhhh............eeeeeee..................eeeeee.....eeeeee............hhhhhh................eeeeee.hhhhhhhhhhhhhhhh...eee......hhhhhhhhhhhhhhhhhhhhhhh....eeeee........eeeee...ee.hhhhhhhhhh.......hhhhhhhhhhh........hhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhh..ee......................ee...eeeeee.hhhhhhhhhh......eeee....hhhhhhh..........eee...eee.....hhhhhhhhhhhhhhhhhhhhhhhhhhh---------------------------------------------hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh......eeeee..eeeeehhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.......eeeeeee..........eeeee..eeeeeeeee..eeeeeeeeeee.hhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhheeee..hhhhhh.........hhhhhhhhhhhhhhh............eeeeee..........eeeee.....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.......... Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DNA_POLYM------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
2p5o C 1 mKEFYLTVEQIGDSIFERYIDSNGRERTREVEYKPSLFAHCPESQATKYFDIYGKPCTRKLFANmRDASQWIKRmEDIGLEALGmDDFKLAYLSDTYNYEIKYDHTKIRVANFDIEVTSPDGFPEPSQAKHPIDAITHYDSIDDRFYVFDLLNSPYGNVEEWSIEIAAKLQEQGGDEVPSEIIDKIIYmPFDNEKELLmEYLNFWQQKTPVILTGWNVESFAIPYVYNRIKNIFGESTAKRLSPHRKTRVKVIENmYGSREIITLFGISVLDYIDLYKKFSFTNQPSYSLDYISEFELNVGKLKYDGPISKLRESNHQRYISYNIIAVYRVLQIDAKRQFINLSLDmGYYAKIQIQSVFSPIKTWDAIIFNSLKEQNKVIPQGRSHPVQPYPGAFVKEPIPNRYKYVmSFDLTSLYPSIIRQVNISPETIAGTFKVAPLHDYINAVAERPSDVYSCSPNGmmYYKDRDGVVPTEITKVFNQRKEHKGYmLAAQRN---------------------------------------------mLFRAQRTEVAGmTAQINRKLLINSLYGALGNVWFRYYDLRNATAITTFGQmALQWIERKVNEYLNEVCGTEGEAFVLYGDTDSIYVSADKIIDKVGESKFRDTNHWVDFLDKFARERmEPAIDRGFREmCEYmNNKQHLmFmDREAIAGPPLGSKGIGGFWTGKKRYALNVWDmEGTRYAEPKLKImGLETQKSSTPKAVQKALKECIRRmLQEGEESLQEYFKEFEKEFRQLNYISIASVSSANNIAKYDVGGFPGPKCPFHIRGILTYNRAIKGNIDAPQVVEGEKVYVLPLREGNPFGDKCIAWPSGTEITDLIKDDVLHWmDYTVLLEKTFIKPLEGFTSAAKLDYEKKASLF 898
| 10 20 30 40 50 60 | 70 | 80 | 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 | 260 270 280 290 300 310 320 330 340 |350 360 370 380 390 400 410 420 430 440 450 460|| 470 480 490 | - - - - -| 550 | 560 570 580 590 | 600 610 620 630 640 650 660 670 | 680| | 690 700 710 | 720 730 740 750 | 760 770 780 790 800 810 820 830 840 850 860 | 870 880 890
| 65-MSE 75-MSE 85-MSE 189-MSE 199-MSE 256-MSE 347-MSE 408-MSE 461-MSE 489-MSE95 541-MSE 553-MSE 592-MSE 659-MSE 670-MSE | | 715-MSE 728-MSE 752-MSE 866-MSE
1-MSE 462-MSE 674-MSE | |
681-MSE
683-MSE
Chain D from PDB Type:PROTEIN Length:671
aligned with DPOL_BPR69 | Q38087 from UniProtKB/Swiss-Prot Length:903
Alignment length:896
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 610 620 630 640 650 660 670 680 690 700 710 720 730 740 750 760 770 780 790 800 810 820 830 840 850 860 870 880 890
DPOL_BPR69 1 MKEFYLTVEQIGDSIFERYIDSNGRERTREVEYKPSLFAHCPESQATKYFDIYGKPCTRKLFANMRDASQWIKRMEDIGLEALGMDDFKLAYLSDTYNYEIKYDHTKIRVANFDIEVTSPDGFPEPSQAKHPIDAITHYDSIDDRFYVFDLLNSPYGNVEEWSIEIAAKLQEQGGDEVPSEIIDKIIYMPFDNEKELLMEYLNFWQQKTPVILTGWNVESFDIPYVYNRIKNIFGESTAKRLSPHRKTRVKVIENMYGSREIITLFGISVLDYIDLYKKFSFTNQPSYSLDYISEFELNVGKLKYDGPISKLRESNHQRYISYNIIDVYRVLQIDAKRQFINLSLDMGYYAKIQIQSVFSPIKTWDAIIFNSLKEQNKVIPQGRSHPVQPYPGAFVKEPIPNRYKYVMSFDLTSLYPSIIRQVNISPETIAGTFKVAPLHDYINAVAERPSDVYSCSPNGMMYYKDRDGVVPTEITKVFNQRKEHKGYMLAAQRNGEIIKEALHNPNLSVDEPLDVDYRFDFSDEIKEKIKKLSAKSLNEMLFRAQRTEVAGMTAQINRKLLINSLYGALGNVWFRYYDLRNATAITTFGQMALQWIERKVNEYLNEVCGTEGEAFVLYGDTDSIYVSADKIIDKVGESKFRDTNHWVDFLDKFARERMEPAIDRGFREMCEYMNNKQHLMFMDREAIAGPPLGSKGIGGFWTGKKRYALNVWDMEGTRYAEPKLKIMGLETQKSSTPKAVQKALKECIRRMLQEGEESLQEYFKEFEKEFRQLNYISIASVSSANNIAKYDVGGFPGPKCPFHIRGILTYNRAIKGNIDAPQVVEGEKVYVLPLREGNPFGDKCIAWPSGTEITDLIKDDVLHWMDYTVLLEKTFIKPLEGFTSAAKLDYEKKAS 896
SCOP domains d2p5od1 D:1-375 Exonuclease domain of family B DNA polymerases d2p5od2 D:376-896 Family B DNA polymerase SCOP domains
CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains (1) ---------------------------DNA_pol_B_exo1-2p5oD05 D:28-293 --------------------------------------------------------------------DNA_pol_B-2p5oD01 D:362-779 ------------------------------------ Pfam domains (1)
Pfam domains (2) ---------------------------DNA_pol_B_exo1-2p5oD06 D:28-293 --------------------------------------------------------------------DNA_pol_B-2p5oD02 D:362-779 ------------------------------------ Pfam domains (2)
Pfam domains (3) ---------------------------DNA_pol_B_exo1-2p5oD07 D:28-293 --------------------------------------------------------------------DNA_pol_B-2p5oD03 D:362-779 ------------------------------------ Pfam domains (3)
Pfam domains (4) ---------------------------DNA_pol_B_exo1-2p5oD08 D:28-293 --------------------------------------------------------------------DNA_pol_B-2p5oD04 D:362-779 ------------------------------------ Pfam domains (4)
Sec.struct. author ...eeeee........eeee.......ee........ee..hhhhh...ee......ee....hhhhhhhhhhhhhhhh........hhhhhhhhhh......hhhhh.---------------------------------------------------------------------------------....hhhhhhhhh..........ee.....hhhhhhhhhhhh..............ee....--------....ee....eehhhhhhh.........hhhhhhhh.......................hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhh...ee...........................eeeeee.hhhhhhhhhhh.hhh.eeee....hhhhhhh..........eee...eee.......hhhhhhhhhhh-------------------------------------------------------hhhhhhhhhh............hhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh........eeeee..eeeeehhhhhhh.hhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh........eeeeeee..........eeeee..eeee...........................hhhhhhhhhhhhhhhhh......hhhhhhhhhhhhh.hhhhh---------------------------------------------------------------------------------......hhhhhhh..hhhhhhhhhhh.......... Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DNA_POLYM----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
2p5o D 1 mKEFYLTVEQIGDSIFERYIDSNGRERTREVEYKPSLFAHCPESQATKYFDIYGKPCTRKLFANmRDASQWIKRmEDIGLEALGmDDFKLAYLSDTYNYEIKYDHTKIR---------------------------------------------------------------------------------FDNEKELLmEYLNFWQQKTPVILTGWNVESFAIPYVYNRIKNIFGESTAKRLSPHRKTRVKV--------EIITLFGISVLDYIDLYKKFSFTNQPSYSLDYISEFELNVGKLKYDGPISKLRESNHQRYISYNIIAVYRVLQIDAKRQFINLSLDmGYYAKIQIQSVFSPIKTWDAIIFNSLKEQNKVIPQGRSHPVQPYPGAFVKEPIPNRYKYVmSFDLTSLYPSIIRQVNISPETIAGTFKVAPLHDYINAVAERPSDVYSCSPNGmmYYKDRDGVVPTEITKVFNQ-------------------------------------------------------SLNEmLFRAQRTEVAGmTAQINRKLLINSLYGALGNVWFRYYDLRNATAITTFGQmALQWIERKVNEYLNEVCGTEGEAFVLYGDTDSIYVSADKIIDKVGESKFRDTNHWVDFLDKFARERmEPAIDRGFREmCEYmNNKQHLmFmDREAIAGPPLGSKGIGGFWTGKKRYALNVWDmEGTRYAEPKLKImGLETQKSSTPKAVQKALKECIRRmLQEGEESLQEYFKEFEKEFRQLNYISI---------------------------------------------------------------------------------DVLHWmDYTVLLEKTFIKPLEGFTSAAKLDYEKKAS 896
| 10 20 30 40 50 60 | 70 | 80 | 90 100 |- - - - - - - - -| 200 210 220 230 240 250 | -| 270 280 290 300 310 320 330 340 |350 360 370 380 390 400 410 420 430 440 450 460|| 470 480| - - - - - |540| 550 | 560 570 580 590 | 600 610 620 630 640 650 660 670 | 680| | 690 700 710 | 720 730 740 750 | 760 770 |- - - - - - - - -| | 870 880 890
1-MSE 65-MSE 75-MSE 85-MSE 109 191 199-MSE 252 261 347-MSE 408-MSE 461-MSE 481 537 | 553-MSE 592-MSE 659-MSE 670-MSE | | 715-MSE 728-MSE 752-MSE 779 861 |
462-MSE 541-MSE 674-MSE | | 866-MSE
681-MSE
683-MSE
Chain E from PDB Type:DNA Length:18
2p5o E 1 CGxCTTATGACAGCCGCG 18
| 10
3-3DR
Chain F from PDB Type:DNA Length:15
2p5o F 101 GCGGCTGTCATAAGA 115
110
Chain G from PDB Type:DNA Length:13
2p5o G 6 TATGACAGCCGCG 18
15
Chain H from PDB Type:DNA Length:15
2p5o H 101 GCGGCTGTCATAAGA 115
110
Chain I from PDB Type:DNA Length:18
2p5o I 1 CGxCTTATGACAGCCGCG 18
| 10
3-3DR
Chain J from PDB Type:DNA Length:15
2p5o J 101 GCGGCTGTCATAAGA 115
110
Chain K from PDB Type:DNA Length:9
2p5o K 10 ACAGCCGCG 18
Chain L from PDB Type:DNA Length:8
2p5o L 101 GCGGCTGT 108
Legend: |
|
→ Mismatch |
(orange background) |
|
- |
→ Gap |
(green background, '-', border residues have a numbering label) |
|
|
→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
|
x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
|
extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |