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(-) Description

Title :  CRYSTAL STRUCTURE OF HANSENULA POLYMORPHA AMINE OXIDASE IN COMPLEX WITH XE TO 1.6 ANGSTROMS
 
Authors :  B. J. Johnson, C. M. Wilmot
Date :  31 Jan 07  (Deposition) - 10 Apr 07  (Release) - 13 Jul 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.60
Chains :  Asym. Unit :  A,B,C,D,E,F
Biol. Unit 1:  A,B  (1x)
Biol. Unit 2:  C,D  (1x)
Biol. Unit 3:  E,F  (1x)
Biol. Unit 4:  A (1x),B (1x),E (1x),F (1x)
Biol. Unit 5:  A,B,C,D,E,F  (1x)
Keywords :  Protein-Derived Cofactor, Tpq, Xe, Xenon Complex, Oxidoreductase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  B. J. Johnson, J. Cohen, R. W. Welford, A. R. Pearson, K. Schulten, J. P. Klinman, C. M. Wilmot
Exploring Molecular Oxygen Pathways In Hansenula Polymorpha Copper-Containing Amine Oxidase
J. Biol. Chem. V. 282 17767 2007
PubMed-ID: 17409383  |  Reference-DOI: 10.1074/JBC.M701308200

(-) Compounds

Molecule 1 - PEROXISOMAL COPPER AMINE OXIDASE
    Chains: A, B
    EC Number: 1.4.3.6
    Engineered: YES
    Expression System: SACCHAROMYCES CEREVISIAE
    Expression System Common: BAKER'S YEAST
    Expression System Plasmid: PDB20
    Expression System Strain: CG379
    Expression System Taxid: 4932
    Expression System Vector Type: PLASMID
    Fragment: RESIDUES 13-672
    Gene: AMO
    Organism Scientific: PICHIA ANGUSTA
    Organism Taxid: 4905
    Synonym: METHYLAMINE OXIDASE
 
Molecule 2 - PEROXISOMAL COPPER AMINE OXIDASE
    Chains: C, D, E, F
    EC Number: 1.4.3.6
    Engineered: YES
    Expression System: SACCHAROMYCES CEREVISIAE
    Expression System Common: BAKER'S YEAST
    Expression System Plasmid: PDB20
    Expression System Strain: CG379
    Expression System Taxid: 4932
    Expression System Vector Type: PLASMID
    Fragment: RESIDUES 13-672
    Gene: AMO
    Organism Scientific: PICHIA ANGUSTA
    Organism Taxid: 4905
    Synonym: METHYLAMINE OXIDASE

 Structural Features

(-) Chains, Units

  123456
Asymmetric Unit : ABCDEF
Biological Unit 1 (1x): AB    
Biological Unit 2 (1x):   CD  
Biological Unit 3 (1x):     EF
Biological Unit 4 (1x): A (1x)B (1x)  E (1x)F (1x)
Biological Unit 5 (1x): ABCDEF

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (5, 87)

Asymmetric Unit (5, 87)
No.NameCountTypeFull Name
1CU6Ligand/IonCOPPER (II) ION
2GOL49Ligand/IonGLYCEROL
3SME2Mod. Amino AcidMETHIONINE SULFOXIDE
4TPQ6Mod. Amino Acid5-(2-CARBOXY-2-AMINOETHYL)-2-HYDROXY-1,4-BENZOQUINONE
5XE24Ligand/IonXENON
Biological Unit 1 (3, 24)
No.NameCountTypeFull Name
1CU-1Ligand/IonCOPPER (II) ION
2GOL20Ligand/IonGLYCEROL
3SME2Mod. Amino AcidMETHIONINE SULFOXIDE
4TPQ2Mod. Amino Acid5-(2-CARBOXY-2-AMINOETHYL)-2-HYDROXY-1,4-BENZOQUINONE
5XE-1Ligand/IonXENON
Biological Unit 2 (2, 14)
No.NameCountTypeFull Name
1CU-1Ligand/IonCOPPER (II) ION
2GOL12Ligand/IonGLYCEROL
3SME-1Mod. Amino AcidMETHIONINE SULFOXIDE
4TPQ2Mod. Amino Acid5-(2-CARBOXY-2-AMINOETHYL)-2-HYDROXY-1,4-BENZOQUINONE
5XE-1Ligand/IonXENON
Biological Unit 3 (2, 19)
No.NameCountTypeFull Name
1CU-1Ligand/IonCOPPER (II) ION
2GOL17Ligand/IonGLYCEROL
3SME-1Mod. Amino AcidMETHIONINE SULFOXIDE
4TPQ2Mod. Amino Acid5-(2-CARBOXY-2-AMINOETHYL)-2-HYDROXY-1,4-BENZOQUINONE
5XE-1Ligand/IonXENON
Biological Unit 4 (3, 24)
No.NameCountTypeFull Name
1CU-1Ligand/IonCOPPER (II) ION
2GOL20Ligand/IonGLYCEROL
3SME2Mod. Amino AcidMETHIONINE SULFOXIDE
4TPQ2Mod. Amino Acid5-(2-CARBOXY-2-AMINOETHYL)-2-HYDROXY-1,4-BENZOQUINONE
5XE-1Ligand/IonXENON
Biological Unit 5 (3, 57)
No.NameCountTypeFull Name
1CU-1Ligand/IonCOPPER (II) ION
2GOL49Ligand/IonGLYCEROL
3SME2Mod. Amino AcidMETHIONINE SULFOXIDE
4TPQ6Mod. Amino Acid5-(2-CARBOXY-2-AMINOETHYL)-2-HYDROXY-1,4-BENZOQUINONE
5XE-1Ligand/IonXENON

(-) Sites  (0, 0)

(no "Site" information available for 2OQE)

(-) SS Bonds  (6, 6)

Asymmetric Unit
No.Residues
1A:338 -A:364
2B:338 -B:364
3C:338 -C:364
4D:338 -D:364
5E:338 -E:364
6F:338 -F:364

(-) Cis Peptide Bonds  (21, 21)

Asymmetric Unit
No.Residues
1Phe A:310 -Pro A:311
2Leu A:334 -Gly A:335
3Gly A:441 -Pro A:442
4Phe A:631 -Pro A:632
5Phe B:310 -Pro B:311
6Gly B:441 -Pro B:442
7Phe B:631 -Pro B:632
8Phe C:310 -Pro C:311
9Gly C:441 -Pro C:442
10Phe C:631 -Pro C:632
11Phe D:310 -Pro D:311
12Gly D:441 -Pro D:442
13Phe D:631 -Pro D:632
14Phe E:310 -Pro E:311
15Asp E:436 -Asp E:437
16Gly E:441 -Pro E:442
17Phe E:631 -Pro E:632
18Phe F:310 -Pro F:311
19Gly F:335 -Cys F:336
20Gly F:441 -Pro F:442
21Phe F:631 -Pro F:632

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 2OQE)

(-) PROSITE Motifs  (2, 12)

Asymmetric Unit (2, 12)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1COPPER_AMINE_OXID_1PS01164 Copper amine oxidase topaquinone signature.AMO_PICAN394-407
 
 
 
 
 		  6A:394-407
B:394-407
C:394-407
D:394-407
E:394-407
F:394-407
2COPPER_AMINE_OXID_2PS01165 Copper amine oxidase copper-binding site signature.AMO_PICAN619-632
 
 
 
 
 		  6A:619-632
B:619-632
C:619-632
D:619-632
E:619-632
F:619-632
Biological Unit 1 (2, 4)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1COPPER_AMINE_OXID_1PS01164 Copper amine oxidase topaquinone signature.AMO_PICAN394-407
 
 
 
 
 		  2A:394-407
B:394-407
-
-
-
-
2COPPER_AMINE_OXID_2PS01165 Copper amine oxidase copper-binding site signature.AMO_PICAN619-632
 
 
 
 
 		  2A:619-632
B:619-632
-
-
-
-
Biological Unit 2 (2, 4)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1COPPER_AMINE_OXID_1PS01164 Copper amine oxidase topaquinone signature.AMO_PICAN394-407
 
 
 
 
 		  2-
-
C:394-407
D:394-407
-
-
2COPPER_AMINE_OXID_2PS01165 Copper amine oxidase copper-binding site signature.AMO_PICAN619-632
 
 
 
 
 		  2-
-
C:619-632
D:619-632
-
-
Biological Unit 3 (2, 4)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1COPPER_AMINE_OXID_1PS01164 Copper amine oxidase topaquinone signature.AMO_PICAN394-407
 
 
 
 
 		  2-
-
-
-
E:394-407
F:394-407
2COPPER_AMINE_OXID_2PS01165 Copper amine oxidase copper-binding site signature.AMO_PICAN619-632
 
 
 
 
 		  2-
-
-
-
E:619-632
F:619-632
Biological Unit 4 (2, 8)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1COPPER_AMINE_OXID_1PS01164 Copper amine oxidase topaquinone signature.AMO_PICAN394-407
 
 
 
 
 		  4A:394-407
B:394-407
-
-
E:394-407
F:394-407
2COPPER_AMINE_OXID_2PS01165 Copper amine oxidase copper-binding site signature.AMO_PICAN619-632
 
 
 
 
 		  4A:619-632
B:619-632
-
-
E:619-632
F:619-632
Biological Unit 5 (2, 12)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1COPPER_AMINE_OXID_1PS01164 Copper amine oxidase topaquinone signature.AMO_PICAN394-407
 
 
 
 
 		  6A:394-407
B:394-407
C:394-407
D:394-407
E:394-407
F:394-407
2COPPER_AMINE_OXID_2PS01165 Copper amine oxidase copper-binding site signature.AMO_PICAN619-632
 
 
 
 
 		  6A:619-632
B:619-632
C:619-632
D:619-632
E:619-632
F:619-632

(-) Exons   (0, 0)

(no "Exon" information available for 2OQE)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:656
 aligned with AMO_PICAN | P12807 from UniProtKB/Swiss-Prot  Length:692

    Alignment length:656
                                    26        36        46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216       226       236       246       256       266       276       286       296       306       316       326       336       346       356       366       376       386       396       406       416       426       436       446       456       466       476       486       496       506       516       526       536       546       556       566       576       586       596       606       616       626       636       646       656       666      
            AMO_PICAN    17 APARPAHPLDPLSTAEIKAATNTVKSYFAGKKISFNTVTLREPARKAYIQWKEQGGPLPPRLAYYVILEAGKPGVKEGLVDLASLSVIETRALETVQPILTVEDLCSTEEVIRNDPAVIEQCVLSGIPANEMHKVYCDPWTIGYDERWGTGKRLQQALVYYRSDEDDSQYSHPLDFCPIVDTEEKKVIFIDIPNRRRKVSKHKHANFYPKHMIEKVGAMRPEAPPINVTQPEGVSFKMTGNVMEWSNFKFHIGFNYREGIVLSDVSYNDHGNVRPIFHRISLSEMIVPYGSPEFPHQRKHALDIGEYGAGYMTNPLSLGCDCKGVIHYLDAHFSDRAGDPITVKNAVCIHEEDDGLLFKHSDFRDNFATSLVTRATKLVVSQIFTAANYEYCLYWVFMQDGAIRLDIRLTGILNTYILGDDEEAGPWGTRVYPNVNAHNHQHLFSLRIDPRIDGDGNSAAACDAKSSPYPLGSPENMYGNAFYSEKTTFKTVKDSLTNYESATGRSWDIFNPNKVNPYSGKPPSYKLVSTQCPPLLAKEGSLVAKRAPWASHSVNVVPYKDNRLYPSGDHVPQWSGDGVRGMREWIGDGSENIDNTDILFFHTFGITHFPAPEDFPLMPAEPITLMLRPRHFFTENPGLDIQPSYAMTTSEAKRAV 672
               SCOP domains -d2oqea2 A:18-115 Copper amine oxidase, domains 1 and 2                                            d2oqea3 A:116-236 Copper amine oxidase, domains 1 and 2                                                                  d2oqea1 A:237-672 Copper amine oxidase, domain 3                                                                                                                                                                                                                                                                                                                                                                                                     SCOP domains
               CATH domains 2oqeA01 A:17-117  [code=3.10.450.40, no name defined]                                                -----2oqeA02 A:123-231  [code=3.10.450.40, no name defined]                                                       2oqeA03 A:232-670 Copper amine oxidase, Domain 3                                                                                                                                                                                                                                                                                                                                                                                                       -- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ............hhhhhhhhhhhhhhhh....eeeeeeeee..hhhhhhhhhhh.......eeeeeeee.....eeeeeee....eeeeeeee.......hhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhh.eeeeeee............eeeeeeee......hhhhh....eeeee....eeeeee................hhhhhhhhhh.........eee.......eee..eeee..eeeeeeee...eeeeeeeeeee..eeeeeeeeeeeeeeeee......hhhh.eehhhhhh...................eeeeeeee.....eeeeeeeeeeeeeeeeeeeeee.hhhh...eeeeeeeeeeeeeeeee..eeeeeeeeee....eeeeeeeee....ee..........eeeee..eeee.eeeeeeeeeee.......eeeeeeeee...............eeeeeee..hhhhhh...hhhhh.eeeee.............eeeee............hhhhhhhhhhhh.eeeee.....................hhhhhhhh..........eeeeeeeeeee..hhhhh.....eeeeeeeeee..............eeehhhhhhhh. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------COPPER_AMINE_O-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------COPPER_AMINE_O---------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2oqe A  17 APARPAHPLDPLSTAEIKAATNTVKSYFAGKKISFNTVTLREPARKAYIQWKEQGGPLPPRLAYYVILEAGKPGVKEGLVDLASLSVIETRALETVQPILTVEDLCSTEEVIRNDPAVIEQCVLSGIPANEMHKVYCDPWTIGYDERWGTGKRLQQALVYYRSDEDDSQYSHPLDFCPIVDTEEKKVIFIDIPNRRRKVSKHKHANFYPKHMIEKVGAMRPEAPPINVTQPEGVSFKMTGNVMEWSNFKFHIGFNYREGIVLSDVSYNDHGNVRPIFHRISLSEMIVPYGSPEFPHQRKHALDIGEYGAGYMTNPLSLGCDCKGVIHYLDAHFSDRAGDPITVKNAVCIHEEDDGLLFKHSDFRDNFATSLVTRATKLVVSQIFTAANyEYCLYWVFMQDGAIRLDIRLTGILNTYILGDDEEAGPWGTRVYPNVNAHNHQHLFSLRIDPRIDGDGNSAAACDAKSSPYPLGSPENMYGNAFYSEKTTFKTVKDSLTNYESATGRSWDIFNPNKVNPYSGKPPSYKLVSTQCPPLLAKEGSLVAKRAPWASHSVNVVPYKDNRLYPSGDHVPQWSGDGVRGMREWIGDGSENIDNTDILFFHTFGITHFPAPEDFPLmPAEPITLMLRPRHFFTENPGLDIQPSYAMTTSEAKRAV 672
                                    26        36        46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216       226       236       246       256       266       276       286       296       306       316       326       336       346       356       366       376       386       396       406       416       426       436       446       456       466       476       486       496       506       516       526       536       546       556       566       576       586       596       606       616       626       636       646       656       666      
                                                                                                                                                                                                                                                                                                                                                                                                                              405-TPQ                                                                                                                                                                                                                              634-SME                                  


Chain B from PDB  Type:PROTEIN  Length:657
 aligned with AMO_PICAN | P12807 from UniProtKB/Swiss-Prot  Length:692

    Alignment length:657
                                    25        35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255       265       275       285       295       305       315       325       335       345       355       365       375       385       395       405       415       425       435       445       455       465       475       485       495       505       515       525       535       545       555       565       575       585       595       605       615       625       635       645       655       665       
            AMO_PICAN    16 AAPARPAHPLDPLSTAEIKAATNTVKSYFAGKKISFNTVTLREPARKAYIQWKEQGGPLPPRLAYYVILEAGKPGVKEGLVDLASLSVIETRALETVQPILTVEDLCSTEEVIRNDPAVIEQCVLSGIPANEMHKVYCDPWTIGYDERWGTGKRLQQALVYYRSDEDDSQYSHPLDFCPIVDTEEKKVIFIDIPNRRRKVSKHKHANFYPKHMIEKVGAMRPEAPPINVTQPEGVSFKMTGNVMEWSNFKFHIGFNYREGIVLSDVSYNDHGNVRPIFHRISLSEMIVPYGSPEFPHQRKHALDIGEYGAGYMTNPLSLGCDCKGVIHYLDAHFSDRAGDPITVKNAVCIHEEDDGLLFKHSDFRDNFATSLVTRATKLVVSQIFTAANYEYCLYWVFMQDGAIRLDIRLTGILNTYILGDDEEAGPWGTRVYPNVNAHNHQHLFSLRIDPRIDGDGNSAAACDAKSSPYPLGSPENMYGNAFYSEKTTFKTVKDSLTNYESATGRSWDIFNPNKVNPYSGKPPSYKLVSTQCPPLLAKEGSLVAKRAPWASHSVNVVPYKDNRLYPSGDHVPQWSGDGVRGMREWIGDGSENIDNTDILFFHTFGITHFPAPEDFPLMPAEPITLMLRPRHFFTENPGLDIQPSYAMTTSEAKRAV 672
               SCOP domains --d2oqeb2 B:18-115 Copper amine oxidase, domains 1 and 2                                            d2oqeb3 B:116-236 Copper amine oxidase, domains 1 and 2                                                                  d2oqeb1 B:237-672 Copper amine oxidase, domain 3                                                                                                                                                                                                                                                                                                                                                                                                     SCOP domains
               CATH domains 2oqeB01 B:16-117  [code=3.10.450.40, no name defined]                                                 -----2oqeB02 B:123-231  [code=3.10.450.40, no name defined]                                                       2oqeB03 B:232-670 Copper amine oxidase, Domain 3                                                                                                                                                                                                                                                                                                                                                                                                       -- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .............hhhhhhhhhhhhhhhh....eeeeeeeee..hhhhhhhhhhh.......eeeeeeee.....eeeeeee....eeeeeeee.......hhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhh.eeeeeee............eeeeeeee......hhhhh....eeeee....eeeeee................hhhhhhhhhh.........eee.......eee..eeee..eeeeeeee...eeeeeeeeeee..eeeeeeeeeeeeeeeee......hhhh.eehhhhhh...................eeeeeeee.....eeeeeeeeeeeeeeeeeeeeee.hhhh...eeeeeeeeeeeeeeeee..eeeeeeeeee....eeeeeeeee....ee..........eeeee..eeee.eeeeeeeeeee.......eeeeeeeee...............eeeeeee..hhhhhh...hhhhh.eeeee.............eeeee............hhhhhhhhhhhh.eeeee.....................hhhhhhhh..........eeeeeeeeeee..hhhhh.....eeeeeeeeee..............eeehhhhhhhh. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------COPPER_AMINE_O-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------COPPER_AMINE_O---------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2oqe B  16 AAPARPAHPLDPLSTAEIKAATNTVKSYFAGKKISFNTVTLREPARKAYIQWKEQGGPLPPRLAYYVILEAGKPGVKEGLVDLASLSVIETRALETVQPILTVEDLCSTEEVIRNDPAVIEQCVLSGIPANEMHKVYCDPWTIGYDERWGTGKRLQQALVYYRSDEDDSQYSHPLDFCPIVDTEEKKVIFIDIPNRRRKVSKHKHANFYPKHMIEKVGAMRPEAPPINVTQPEGVSFKMTGNVMEWSNFKFHIGFNYREGIVLSDVSYNDHGNVRPIFHRISLSEMIVPYGSPEFPHQRKHALDIGEYGAGYMTNPLSLGCDCKGVIHYLDAHFSDRAGDPITVKNAVCIHEEDDGLLFKHSDFRDNFATSLVTRATKLVVSQIFTAANyEYCLYWVFMQDGAIRLDIRLTGILNTYILGDDEEAGPWGTRVYPNVNAHNHQHLFSLRIDPRIDGDGNSAAACDAKSSPYPLGSPENMYGNAFYSEKTTFKTVKDSLTNYESATGRSWDIFNPNKVNPYSGKPPSYKLVSTQCPPLLAKEGSLVAKRAPWASHSVNVVPYKDNRLYPSGDHVPQWSGDGVRGMREWIGDGSENIDNTDILFFHTFGITHFPAPEDFPLmPAEPITLMLRPRHFFTENPGLDIQPSYAMTTSEAKRAV 672
                                    25        35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255       265       275       285       295       305       315       325       335       345       355       365       375       385       395       405       415       425       435       445       455       465       475       485       495       505       515       525       535       545       555       565       575       585       595       605       615       625       635       645       655       665       
                                                                                                                                                                                                                                                                                                                                                                                                                               405-TPQ                                                                                                                                                                                                                              634-SME                                  


Chain C from PDB  Type:PROTEIN  Length:656
 aligned with AMO_PICAN | P12807 from UniProtKB/Swiss-Prot  Length:692

    Alignment length:656
                                    26        36        46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216       226       236       246       256       266       276       286       296       306       316       326       336       346       356       366       376       386       396       406       416       426       436       446       456       466       476       486       496       506       516       526       536       546       556       566       576       586       596       606       616       626       636       646       656       666      
            AMO_PICAN    17 APARPAHPLDPLSTAEIKAATNTVKSYFAGKKISFNTVTLREPARKAYIQWKEQGGPLPPRLAYYVILEAGKPGVKEGLVDLASLSVIETRALETVQPILTVEDLCSTEEVIRNDPAVIEQCVLSGIPANEMHKVYCDPWTIGYDERWGTGKRLQQALVYYRSDEDDSQYSHPLDFCPIVDTEEKKVIFIDIPNRRRKVSKHKHANFYPKHMIEKVGAMRPEAPPINVTQPEGVSFKMTGNVMEWSNFKFHIGFNYREGIVLSDVSYNDHGNVRPIFHRISLSEMIVPYGSPEFPHQRKHALDIGEYGAGYMTNPLSLGCDCKGVIHYLDAHFSDRAGDPITVKNAVCIHEEDDGLLFKHSDFRDNFATSLVTRATKLVVSQIFTAANYEYCLYWVFMQDGAIRLDIRLTGILNTYILGDDEEAGPWGTRVYPNVNAHNHQHLFSLRIDPRIDGDGNSAAACDAKSSPYPLGSPENMYGNAFYSEKTTFKTVKDSLTNYESATGRSWDIFNPNKVNPYSGKPPSYKLVSTQCPPLLAKEGSLVAKRAPWASHSVNVVPYKDNRLYPSGDHVPQWSGDGVRGMREWIGDGSENIDNTDILFFHTFGITHFPAPEDFPLMPAEPITLMLRPRHFFTENPGLDIQPSYAMTTSEAKRAV 672
               SCOP domains -d2oqec2 C:18-115 Copper amine oxidase, domains 1 and 2                                            d2oqec3 C:116-236 Copper amine oxidase, domains 1 and 2                                                                  d2oqec1 C:237-672 Copper amine oxidase, domain 3                                                                                                                                                                                                                                                                                                                                                                                                     SCOP domains
               CATH domains 2oqeC01 C:17-117  [code=3.10.450.40, no name defined]                                                -----2oqeC02 C:123-231  [code=3.10.450.40, no name defined]                                                       2oqeC03 C:232-670 Copper amine oxidase, Domain 3                                                                                                                                                                                                                                                                                                                                                                                                       -- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ............hhhhhhhhhhhhhhhh....eeeeeeeee..hhhhhhhhhhh.......eeeeeeee.....eeeeeee....eeeeeeee.......hhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhh.eeeeeee............eeeeeeee......hhhhh....eeeee....eeeeee................hhhhhhhhhh.........eee.......eee..eeee..eeeeeeee...eeeeeeeeeee..eeeeeeeeeeeeeeeee......hhhh.eehhhhhh...................eeeeeeee.....eeeeeeeeeeeeeeeeeeeeee.hhhh...eeeeeeeeeeeeeeeee..eeeeeeeeee....eeeeeeeee....ee..........eeeee..eeee.eeeeeeeeeee.......eeeeeeeee...............eeeeeee..hhhhhh...hhhhh.eeeee.............eeeee............hhhhhhhhhhhh.eeeee.....................hhhhhhhh..........eeeeeeeeeee..hhhhh..eeeeeeeeeeeee..............eeehhhhhhhh. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------COPPER_AMINE_O-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------COPPER_AMINE_O---------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2oqe C  17 APARPAHPLDPLSTAEIKAATNTVKSYFAGKKISFNTVTLREPARKAYIQWKEQGGPLPPRLAYYVILEAGKPGVKEGLVDLASLSVIETRALETVQPILTVEDLCSTEEVIRNDPAVIEQCVLSGIPANEMHKVYCDPWTIGYDERWGTGKRLQQALVYYRSDEDDSQYSHPLDFCPIVDTEEKKVIFIDIPNRRRKVSKHKHANFYPKHMIEKVGAMRPEAPPINVTQPEGVSFKMTGNVMEWSNFKFHIGFNYREGIVLSDVSYNDHGNVRPIFHRISLSEMIVPYGSPEFPHQRKHALDIGEYGAGYMTNPLSLGCDCKGVIHYLDAHFSDRAGDPITVKNAVCIHEEDDGLLFKHSDFRDNFATSLVTRATKLVVSQIFTAANyEYCLYWVFMQDGAIRLDIRLTGILNTYILGDDEEAGPWGTRVYPNVNAHNHQHLFSLRIDPRIDGDGNSAAACDAKSSPYPLGSPENMYGNAFYSEKTTFKTVKDSLTNYESATGRSWDIFNPNKVNPYSGKPPSYKLVSTQCPPLLAKEGSLVAKRAPWASHSVNVVPYKDNRLYPSGDHVPQWSGDGVRGMREWIGDGSENIDNTDILFFHTFGITHFPAPEDFPLMPAEPITLMLRPRHFFTENPGLDIQPSYAMTTSEAKRAV 672
                                    26        36        46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216       226       236       246       256       266       276       286       296       306       316       326       336       346       356       366       376       386       396       406       416       426       436       446       456       466       476       486       496       506       516       526       536       546       556       566       576       586       596       606       616       626       636       646       656       666      
                                                                                                                                                                                                                                                                                                                                                                                                                              405-TPQ                                                                                                                                                                                                                                                                       


Chain D from PDB  Type:PROTEIN  Length:656
 aligned with AMO_PICAN | P12807 from UniProtKB/Swiss-Prot  Length:692

    Alignment length:656
                                    26        36        46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216       226       236       246       256       266       276       286       296       306       316       326       336       346       356       366       376       386       396       406       416       426       436       446       456       466       476       486       496       506       516       526       536       546       556       566       576       586       596       606       616       626       636       646       656       666      
            AMO_PICAN    17 APARPAHPLDPLSTAEIKAATNTVKSYFAGKKISFNTVTLREPARKAYIQWKEQGGPLPPRLAYYVILEAGKPGVKEGLVDLASLSVIETRALETVQPILTVEDLCSTEEVIRNDPAVIEQCVLSGIPANEMHKVYCDPWTIGYDERWGTGKRLQQALVYYRSDEDDSQYSHPLDFCPIVDTEEKKVIFIDIPNRRRKVSKHKHANFYPKHMIEKVGAMRPEAPPINVTQPEGVSFKMTGNVMEWSNFKFHIGFNYREGIVLSDVSYNDHGNVRPIFHRISLSEMIVPYGSPEFPHQRKHALDIGEYGAGYMTNPLSLGCDCKGVIHYLDAHFSDRAGDPITVKNAVCIHEEDDGLLFKHSDFRDNFATSLVTRATKLVVSQIFTAANYEYCLYWVFMQDGAIRLDIRLTGILNTYILGDDEEAGPWGTRVYPNVNAHNHQHLFSLRIDPRIDGDGNSAAACDAKSSPYPLGSPENMYGNAFYSEKTTFKTVKDSLTNYESATGRSWDIFNPNKVNPYSGKPPSYKLVSTQCPPLLAKEGSLVAKRAPWASHSVNVVPYKDNRLYPSGDHVPQWSGDGVRGMREWIGDGSENIDNTDILFFHTFGITHFPAPEDFPLMPAEPITLMLRPRHFFTENPGLDIQPSYAMTTSEAKRAV 672
               SCOP domains -d2oqed2 D:18-115 Copper amine oxidase, domains 1 and 2                                            d2oqed3 D:116-236 Copper amine oxidase, domains 1 and 2                                                                  d2oqed1 D:237-672 Copper amine oxidase, domain 3                                                                                                                                                                                                                                                                                                                                                                                                     SCOP domains
               CATH domains 2oqeD01 D:17-117  [code=3.10.450.40, no name defined]                                                -----2oqeD02 D:123-231  [code=3.10.450.40, no name defined]                                                       2oqeD03 D:232-670 Copper amine oxidase, Domain 3                                                                                                                                                                                                                                                                                                                                                                                                       -- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ............hhhhhhhhhhhhhhhh....eeeeeeeee..hhhhhhhhhhh.......eeeeeeee.....eeeeeee....eeeeeeee.......hhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhh.eeeeeee............eeeeeeee......hhhhh....eeeee....eeeeee................hhhhhhhhhh.........eee.......eee..eeee..eeeeeeee...eeeeeeeeeee..eeeeeeeeeeeeeeeee......hhhh.eehhhhhh...................eeeeeeee.....eeeeeeeeeeeeeeeeeeeeee.hhhh...eeeeeeeeeeeeeeeee..eeeeeeeeee....eeeeeeeee....ee..........eeeee..eeee.eeeeeeeeeee.......eeeeeeeee...............eeeeeee..hhhhhh...hhhhh.eeeee.............eeeee............hhhhhhhhhhhh.eeeee.....................hhhhhhhh..........eeeeeeeeeee..hhhhh.....eeeeeeeeee..............eeehhhhhhhh. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------COPPER_AMINE_O-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------COPPER_AMINE_O---------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2oqe D  17 APARPAHPLDPLSTAEIKAATNTVKSYFAGKKISFNTVTLREPARKAYIQWKEQGGPLPPRLAYYVILEAGKPGVKEGLVDLASLSVIETRALETVQPILTVEDLCSTEEVIRNDPAVIEQCVLSGIPANEMHKVYCDPWTIGYDERWGTGKRLQQALVYYRSDEDDSQYSHPLDFCPIVDTEEKKVIFIDIPNRRRKVSKHKHANFYPKHMIEKVGAMRPEAPPINVTQPEGVSFKMTGNVMEWSNFKFHIGFNYREGIVLSDVSYNDHGNVRPIFHRISLSEMIVPYGSPEFPHQRKHALDIGEYGAGYMTNPLSLGCDCKGVIHYLDAHFSDRAGDPITVKNAVCIHEEDDGLLFKHSDFRDNFATSLVTRATKLVVSQIFTAANyEYCLYWVFMQDGAIRLDIRLTGILNTYILGDDEEAGPWGTRVYPNVNAHNHQHLFSLRIDPRIDGDGNSAAACDAKSSPYPLGSPENMYGNAFYSEKTTFKTVKDSLTNYESATGRSWDIFNPNKVNPYSGKPPSYKLVSTQCPPLLAKEGSLVAKRAPWASHSVNVVPYKDNRLYPSGDHVPQWSGDGVRGMREWIGDGSENIDNTDILFFHTFGITHFPAPEDFPLMPAEPITLMLRPRHFFTENPGLDIQPSYAMTTSEAKRAV 672
                                    26        36        46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216       226       236       246       256       266       276       286       296       306       316       326       336       346       356       366       376       386       396       406       416       426       436       446       456       466       476       486       496       506       516       526       536       546       556       566       576       586       596       606       616       626       636       646       656       666      
                                                                                                                                                                                                                                                                                                                                                                                                                              405-TPQ                                                                                                                                                                                                                                                                       


Chain E from PDB  Type:PROTEIN  Length:657
 aligned with AMO_PICAN | P12807 from UniProtKB/Swiss-Prot  Length:692

    Alignment length:657
                                    25        35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255       265       275       285       295       305       315       325       335       345       355       365       375       385       395       405       415       425       435       445       455       465       475       485       495       505       515       525       535       545       555       565       575       585       595       605       615       625       635       645       655       665       
            AMO_PICAN    16 AAPARPAHPLDPLSTAEIKAATNTVKSYFAGKKISFNTVTLREPARKAYIQWKEQGGPLPPRLAYYVILEAGKPGVKEGLVDLASLSVIETRALETVQPILTVEDLCSTEEVIRNDPAVIEQCVLSGIPANEMHKVYCDPWTIGYDERWGTGKRLQQALVYYRSDEDDSQYSHPLDFCPIVDTEEKKVIFIDIPNRRRKVSKHKHANFYPKHMIEKVGAMRPEAPPINVTQPEGVSFKMTGNVMEWSNFKFHIGFNYREGIVLSDVSYNDHGNVRPIFHRISLSEMIVPYGSPEFPHQRKHALDIGEYGAGYMTNPLSLGCDCKGVIHYLDAHFSDRAGDPITVKNAVCIHEEDDGLLFKHSDFRDNFATSLVTRATKLVVSQIFTAANYEYCLYWVFMQDGAIRLDIRLTGILNTYILGDDEEAGPWGTRVYPNVNAHNHQHLFSLRIDPRIDGDGNSAAACDAKSSPYPLGSPENMYGNAFYSEKTTFKTVKDSLTNYESATGRSWDIFNPNKVNPYSGKPPSYKLVSTQCPPLLAKEGSLVAKRAPWASHSVNVVPYKDNRLYPSGDHVPQWSGDGVRGMREWIGDGSENIDNTDILFFHTFGITHFPAPEDFPLMPAEPITLMLRPRHFFTENPGLDIQPSYAMTTSEAKRAV 672
               SCOP domains --d2oqee2 E:18-115 Copper amine oxidase, domains 1 and 2                                            d2oqee3 E:116-236 Copper amine oxidase, domains 1 and 2                                                                  d2oqee1 E:237-672 Copper amine oxidase, domain 3                                                                                                                                                                                                                                                                                                                                                                                                     SCOP domains
               CATH domains 2oqeE01 E:16-117  [code=3.10.450.40, no name defined]                                                 -----2oqeE02 E:123-231  [code=3.10.450.40, no name defined]                                                       2oqeE03 E:232-670 Copper amine oxidase, Domain 3                                                                                                                                                                                                                                                                                                                                                                                                       -- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .............hhhhhhhhhhhhhhhh....eeeeeeeee..hhhhhhhhhhh.......eeeeeeee.....eeeeeee....eeeeeeee.......hhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhh.eeeeeee............eeeeeeee......hhhhh....eeeee....eeeeee................hhhhhhhhhh.........eee.......eee..eeee..eeeeeeee...eeeeeeeeeee..eeeeeeeeeeeeeeeee......hhhh.eehhhhhh...................eeeeeeee.....eeeeeeeeeeeeeeeeeeeeee.hhhh...eeeeeeeeeeeeeeeee..eeeeeeeee.....eeeeeeeee....ee..........eeeee..eeee.eeeeeeeeeee.......eeeeeeeee...............eeeeeee..hhhhhh...hhhhh.eeeee.............eeeee............hhhhhhhhhhhh.eeeee.....................hhhhhhhh..........eeeeeeeeeee..hhhhh.....eeeeeeeeee..............eeehhhhhhhh. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------COPPER_AMINE_O-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------COPPER_AMINE_O---------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2oqe E  16 AAPARPAHPLDPLSTAEIKAATNTVKSYFAGKKISFNTVTLREPARKAYIQWKEQGGPLPPRLAYYVILEAGKPGVKEGLVDLASLSVIETRALETVQPILTVEDLCSTEEVIRNDPAVIEQCVLSGIPANEMHKVYCDPWTIGYDERWGTGKRLQQALVYYRSDEDDSQYSHPLDFCPIVDTEEKKVIFIDIPNRRRKVSKHKHANFYPKHMIEKVGAMRPEAPPINVTQPEGVSFKMTGNVMEWSNFKFHIGFNYREGIVLSDVSYNDHGNVRPIFHRISLSEMIVPYGSPEFPHQRKHALDIGEYGAGYMTNPLSLGCDCKGVIHYLDAHFSDRAGDPITVKNAVCIHEEDDGLLFKHSDFRDNFATSLVTRATKLVVSQIFTAANyEYCLYWVFMQDGAIRLDIRLTGILNTYILGDDEEAGPWGTRVYPNVNAHNHQHLFSLRIDPRIDGDGNSAAACDAKSSPYPLGSPENMYGNAFYSEKTTFKTVKDSLTNYESATGRSWDIFNPNKVNPYSGKPPSYKLVSTQCPPLLAKEGSLVAKRAPWASHSVNVVPYKDNRLYPSGDHVPQWSGDGVRGMREWIGDGSENIDNTDILFFHTFGITHFPAPEDFPLMPAEPITLMLRPRHFFTENPGLDIQPSYAMTTSEAKRAV 672
                                    25        35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255       265       275       285       295       305       315       325       335       345       355       365       375       385       395       405       415       425       435       445       455       465       475       485       495       505       515       525       535       545       555       565       575       585       595       605       615       625       635       645       655       665       
                                                                                                                                                                                                                                                                                                                                                                                                                               405-TPQ                                                                                                                                                                                                                                                                       


Chain F from PDB  Type:PROTEIN  Length:656
 aligned with AMO_PICAN | P12807 from UniProtKB/Swiss-Prot  Length:692

    Alignment length:656
                                    26        36        46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216       226       236       246       256       266       276       286       296       306       316       326       336       346       356       366       376       386       396       406       416       426       436       446       456       466       476       486       496       506       516       526       536       546       556       566       576       586       596       606       616       626       636       646       656       666      
            AMO_PICAN    17 APARPAHPLDPLSTAEIKAATNTVKSYFAGKKISFNTVTLREPARKAYIQWKEQGGPLPPRLAYYVILEAGKPGVKEGLVDLASLSVIETRALETVQPILTVEDLCSTEEVIRNDPAVIEQCVLSGIPANEMHKVYCDPWTIGYDERWGTGKRLQQALVYYRSDEDDSQYSHPLDFCPIVDTEEKKVIFIDIPNRRRKVSKHKHANFYPKHMIEKVGAMRPEAPPINVTQPEGVSFKMTGNVMEWSNFKFHIGFNYREGIVLSDVSYNDHGNVRPIFHRISLSEMIVPYGSPEFPHQRKHALDIGEYGAGYMTNPLSLGCDCKGVIHYLDAHFSDRAGDPITVKNAVCIHEEDDGLLFKHSDFRDNFATSLVTRATKLVVSQIFTAANYEYCLYWVFMQDGAIRLDIRLTGILNTYILGDDEEAGPWGTRVYPNVNAHNHQHLFSLRIDPRIDGDGNSAAACDAKSSPYPLGSPENMYGNAFYSEKTTFKTVKDSLTNYESATGRSWDIFNPNKVNPYSGKPPSYKLVSTQCPPLLAKEGSLVAKRAPWASHSVNVVPYKDNRLYPSGDHVPQWSGDGVRGMREWIGDGSENIDNTDILFFHTFGITHFPAPEDFPLMPAEPITLMLRPRHFFTENPGLDIQPSYAMTTSEAKRAV 672
               SCOP domains -d2oqef2 F:18-115 Copper amine oxidase, domains 1 and 2                                            d2oqef3 F:116-236 Copper amine oxidase, domains 1 and 2                                                                  d2oqef1 F:237-672 Copper amine oxidase, domain 3                                                                                                                                                                                                                                                                                                                                                                                                     SCOP domains
               CATH domains 2oqeF01 F:17-117  [code=3.10.450.40, no name defined]                                                -----2oqeF02 F:123-231  [code=3.10.450.40, no name defined]                                                       2oqeF03 F:232-670 Copper amine oxidase, Domain 3                                                                                                                                                                                                                                                                                                                                                                                                       -- CATH domains
           Pfam domains (1) ------Cu_amine_oxidN2-2oqeF01 F:23-109                                                       ----Cu_amine_oxidN3-2oqeF07 F:114-216                                                                      ------------------------Cu_amine_oxid-2oqeF13 F:241-662                                                                                                                                                                                                                                                                                                                                                                                                       ---------- Pfam domains (1)
           Pfam domains (2) ------Cu_amine_oxidN2-2oqeF02 F:23-109                                                       ----Cu_amine_oxidN3-2oqeF08 F:114-216                                                                      ------------------------Cu_amine_oxid-2oqeF14 F:241-662                                                                                                                                                                                                                                                                                                                                                                                                       ---------- Pfam domains (2)
           Pfam domains (3) ------Cu_amine_oxidN2-2oqeF03 F:23-109                                                       ----Cu_amine_oxidN3-2oqeF09 F:114-216                                                                      ------------------------Cu_amine_oxid-2oqeF15 F:241-662                                                                                                                                                                                                                                                                                                                                                                                                       ---------- Pfam domains (3)
           Pfam domains (4) ------Cu_amine_oxidN2-2oqeF04 F:23-109                                                       ----Cu_amine_oxidN3-2oqeF10 F:114-216                                                                      ------------------------Cu_amine_oxid-2oqeF16 F:241-662                                                                                                                                                                                                                                                                                                                                                                                                       ---------- Pfam domains (4)
           Pfam domains (5) ------Cu_amine_oxidN2-2oqeF05 F:23-109                                                       ----Cu_amine_oxidN3-2oqeF11 F:114-216                                                                      ------------------------Cu_amine_oxid-2oqeF17 F:241-662                                                                                                                                                                                                                                                                                                                                                                                                       ---------- Pfam domains (5)
           Pfam domains (6) ------Cu_amine_oxidN2-2oqeF06 F:23-109                                                       ----Cu_amine_oxidN3-2oqeF12 F:114-216                                                                      ------------------------Cu_amine_oxid-2oqeF18 F:241-662                                                                                                                                                                                                                                                                                                                                                                                                       ---------- Pfam domains (6)
         Sec.struct. author ............hhhhhhhhhhhhhhhh....eeeeeeeee..hhhhhhhhhhh.......eeeeeeee.....eeeeeee....eeeeeeee.......hhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhh.eeeeeee............eeeeeeee......hhhhh....eeeee....eeeeee................hhhhhhhhhh.........eee.......eee..eeee..eeeeeeee...eeeeeeeeeee..eeeeeeeeeeeeeeeee......hhhh.eehhhhhh...................eeeeeeee.....eeeeeeeeeeeeeeeeeeeeee.hhhh...eeeeeeeeeeeeeeeee..eeeeeeeeee....eeeeeeeee....ee..........eeeee..eeee.eeeeeeeeeee.......eeeeeeeee...............eeeeeee..hhhhhh...hhhhh.eeeee.............eeeee............hhhhhhhhhhhh.eeeee.....................hhhhhhhh..........eeeeeeeeeee..hhhhh..eeeeeeeeeeeee..............eeehhhhhhhh. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------COPPER_AMINE_O-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------COPPER_AMINE_O---------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2oqe F  17 APARPAHPLDPLSTAEIKAATNTVKSYFAGKKISFNTVTLREPARKAYIQWKEQGGPLPPRLAYYVILEAGKPGVKEGLVDLASLSVIETRALETVQPILTVEDLCSTEEVIRNDPAVIEQCVLSGIPANEMHKVYCDPWTIGYDERWGTGKRLQQALVYYRSDEDDSQYSHPLDFCPIVDTEEKKVIFIDIPNRRRKVSKHKHANFYPKHMIEKVGAMRPEAPPINVTQPEGVSFKMTGNVMEWSNFKFHIGFNYREGIVLSDVSYNDHGNVRPIFHRISLSEMIVPYGSPEFPHQRKHALDIGEYGAGYMTNPLSLGCDCKGVIHYLDAHFSDRAGDPITVKNAVCIHEEDDGLLFKHSDFRDNFATSLVTRATKLVVSQIFTAANyEYCLYWVFMQDGAIRLDIRLTGILNTYILGDDEEAGPWGTRVYPNVNAHNHQHLFSLRIDPRIDGDGNSAAACDAKSSPYPLGSPENMYGNAFYSEKTTFKTVKDSLTNYESATGRSWDIFNPNKVNPYSGKPPSYKLVSTQCPPLLAKEGSLVAKRAPWASHSVNVVPYKDNRLYPSGDHVPQWSGDGVRGMREWIGDGSENIDNTDILFFHTFGITHFPAPEDFPLMPAEPITLMLRPRHFFTENPGLDIQPSYAMTTSEAKRAV 672
                                    26        36        46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216       226       236       246       256       266       276       286       296       306       316       326       336       346       356       366       376       386       396       406       416       426       436       446       456       466       476       486       496       506       516       526       536       546       556       566       576       586       596       606       616       626       636       646       656       666      
                                                                                                                                                                                                                                                                                                                                                                                                                              405-TPQ
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (2, 18)

Asymmetric Unit
(-)
Class: All beta proteins (24004)
(-)
Class: Alpha and beta proteins (a+b) (23004)

(-) CATH Domains  (2, 18)

Asymmetric Unit
(-)
Class: Alpha Beta (26913)
(-)
Architecture: Roll (3276)
(-)
Topology: Nuclear Transport Factor 2; Chain: A, (517)
(-)
Homologous Superfamily: [code=3.10.450.40, no name defined] (77)
(-)
Pichia angusta. Organism_taxid: 4905. (2)
1a2oqeB01B:16-117
1b2oqeE01E:16-117
1c2oqeA02A:123-231
1d2oqeB02B:123-231
1e2oqeC02C:123-231
1f2oqeD02D:123-231
1g2oqeE02E:123-231
1h2oqeF02F:123-231
1i2oqeA01A:17-117
1j2oqeC01C:17-117
1k2oqeD01D:17-117
1l2oqeF01F:17-117
(-)
Class: Mainly Beta (13760)

(-) Pfam Domains  (3, 18)

Asymmetric Unit
(-)
Clan: CuAO_N2_N3 (40)
(-)
Clan: no clan defined [family: Cu_amine_oxid] (40)

(-) Gene Ontology  (12, 12)

Asymmetric Unit(hide GO term definitions)
Chain A,B,C,D,E,F   (AMO_PICAN | P12807)
molecular function
    GO:0052595    aliphatic-amine oxidase activity    Catalysis of the reaction: an aliphatic amine + H2O + O2 = an aldehyde + NH3 + hydrogen peroxide + H+.
    GO:0052594    aminoacetone:oxygen oxidoreductase(deaminating) activity    Catalysis of the reaction: aminoacetone + H2O + O2 = methylglyoxal + NH3 + hydrogen peroxide + H+.
    GO:0005507    copper ion binding    Interacting selectively and non-covalently with copper (Cu) ions.
    GO:0046872    metal ion binding    Interacting selectively and non-covalently with any metal ion.
    GO:0016491    oxidoreductase activity    Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
    GO:0052596    phenethylamine:oxygen oxidoreductase (deaminating) activity    Catalysis of the reaction: phenylethylamine + O2 + H2O = phenylacetaldehyde + NH3 + hydrogen peroxide + H+.
    GO:0008131    primary amine oxidase activity    Catalysis of the reaction: a primary amine + H2O + O2 = an aldehyde + NH3 + hydrogen peroxide.
    GO:0048038    quinone binding    Interacting selectively and non-covalently with a quinone, any member of a class of diketones derivable from aromatic compounds by conversion of two CH groups into CO groups with any necessary rearrangement of double bonds.
    GO:0052593    tryptamine:oxygen oxidoreductase (deaminating) activity    Catalysis of the reaction: tryptamine + H2O + O2 = NH3 + indole acetaldehyde + hydrogen peroxide + H+.
biological process
    GO:0009308    amine metabolic process    The chemical reactions and pathways involving any organic compound that is weakly basic in character and contains an amino or a substituted amino group. Amines are called primary, secondary, or tertiary according to whether one, two, or three carbon atoms are attached to the nitrogen atom.
    GO:0055114    oxidation-reduction process    A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
cellular component
    GO:0005777    peroxisome    A small organelle enclosed by a single membrane, and found in most eukaryotic cells. Contains peroxidases and other enzymes involved in a variety of metabolic processes including free radical detoxification, lipid catabolism and biosynthesis, and hydrogen peroxide metabolism.

 Visualization

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Asymmetric Unit
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  Cis Peptide Bonds
    Asp E:436 - Asp E:437   [ RasMol ]  
    Gly A:441 - Pro A:442   [ RasMol ]  
    Gly B:441 - Pro B:442   [ RasMol ]  
    Gly C:441 - Pro C:442   [ RasMol ]  
    Gly D:441 - Pro D:442   [ RasMol ]  
    Gly E:441 - Pro E:442   [ RasMol ]  
    Gly F:335 - Cys F:336   [ RasMol ]  
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 Related Entries

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        AMO_PICAN | P12807: 1a2v 1ekm 2oov 3n9h 3nbb 3nbj 3sx1 3sxx 3t0u 4ev2 4ev5 4kfd 4kfe 4kff

(-) Related Entries Specified in the PDB File

1a2v PREVIOUS CRYSTALLOGRAPHIC SOLUTION OF HANSENULA POLYMORPHA AMINE OXIDASE
2oov ISOMORPHOUS OXIDIZED HANSENULA POLYMORPHA CRYSTAL STRUCTURE FROM SAME STUDY