Show PDB file:   
         Plain Text   HTML   (compressed file size)
QuickSearch:   
by PDB,NDB,UniProt,PROSITE Code or Search Term(s)  
(-)Asymmetric Unit
(-)Asym. Unit - sites
(-)Biological Unit 1
(-)Biol. Unit 1 - sites
(-)Biological Unit 2
collapse expand < >
Image Asymmetric Unit
Asymmetric Unit  (Jmol Viewer)
Image Asym. Unit - sites
Asym. Unit - sites  (Jmol Viewer)
Image Biological Unit 1
Biological Unit 1  (Jmol Viewer)
Image Biol. Unit 1 - sites
Biol. Unit 1 - sites  (Jmol Viewer)
Image Biological Unit 2
Biological Unit 2  (Jmol Viewer)

(-) Description

Title :  CRYSTAL STRUCTURE OF HANSENULA POLYMORPHA COPPER AMINE OXIDASE-1 REDUCED BY METHYLAMINE AT PH 8.5
 
Authors :  B. J. Johnson, E. T. Yukl, V. J. Klema, C. M. Wilmot
Date :  26 Apr 13  (Deposition) - 28 Aug 13  (Release) - 28 Aug 13  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.15
Chains :  Asym. Unit :  A,B,C
Biol. Unit 1:  A  (2x)
Biol. Unit 2:  B,C  (1x)
Keywords :  Amine Oxidase, Oxidoreductase, Peroxisome (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  B. J. Johnson, E. T. Yukl, V. J. Klema, J. P. Klinman, C. M. Wilmot
Structural Evidence For The Semiquinone In A Copper Amine Oxidase From Hansenula Polymorpha: Implications For The Catalytic Mechanism
J. Biol. Chem. 2013
PubMed: search

(-) Compounds

Molecule 1 - PEROXISOMAL PRIMARY AMINE OXIDASE
    Chains: A, B, C
    EC Number: 1.4.3.21
    Engineered: YES
    Expression System: SACCHAROMYCES CEREVISIAE
    Expression System Taxid: 4932
    Gene: AMO
    Organism Common: YEAST
    Organism Scientific: OGATAEA ANGUSTA
    Organism Taxid: 870730
    Synonym: COPPER AMINE OXIDASE, METHYLAMINE OXIDASE

 Structural Features

(-) Chains, Units

  123
Asymmetric Unit : ABC
Biological Unit 1 (2x): A  
Biological Unit 2 (1x):  BC

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (3, 20)

Asymmetric Unit (3, 20)
No.NameCountTypeFull Name
1CU3Ligand/IonCOPPER (II) ION
2GOL14Ligand/IonGLYCEROL
3TYY3Mod. Amino Acid3-(4-HYDROXY-3-IMINO-6-OXO-CYCLOHEXA-1,4-DIENYL)-ALANINE
Biological Unit 1 (2, 16)
No.NameCountTypeFull Name
1CU-1Ligand/IonCOPPER (II) ION
2GOL14Ligand/IonGLYCEROL
3TYY2Mod. Amino Acid3-(4-HYDROXY-3-IMINO-6-OXO-CYCLOHEXA-1,4-DIENYL)-ALANINE
Biological Unit 2 (2, 9)
No.NameCountTypeFull Name
1CU-1Ligand/IonCOPPER (II) ION
2GOL7Ligand/IonGLYCEROL
3TYY2Mod. Amino Acid3-(4-HYDROXY-3-IMINO-6-OXO-CYCLOHEXA-1,4-DIENYL)-ALANINE

(-) Sites  (17, 17)

Asymmetric Unit (17, 17)
No.NameEvidenceResiduesDescription
01AC1SOFTWARETYY A:405 , HIS A:456 , HIS A:458 , HIS A:624BINDING SITE FOR RESIDUE CU A 801
02AC2SOFTWAREGLU A:368 , LYS A:393 , ASP A:422 , ARG A:424 , HOH A:984 , HOH A:1187BINDING SITE FOR RESIDUE GOL A 802
03AC3SOFTWAREGLY A:142 , GLU A:147 , TYR A:177 , SER A:216 , HOH B:1271BINDING SITE FOR RESIDUE GOL A 803
04AC4SOFTWAREHIS A:218 , LYS A:219 , TYR A:448 , TYR A:534BINDING SITE FOR RESIDUE GOL A 804
05AC5SOFTWAREGLU A:58 , PRO A:59 , TYR A:575 , ASN A:578 , HOH A:907 , HOH A:963 , HOH A:1318BINDING SITE FOR RESIDUE GOL A 805
06AC6SOFTWAREPRO A:442 , PRO A:484 , TYR A:485 , TYR A:499BINDING SITE FOR RESIDUE GOL A 806
07AC7SOFTWARETRP A:67 , LYS A:68BINDING SITE FOR RESIDUE GOL A 807
08AC8SOFTWAREGLN A:66 , GLN A:70 , GLY A:72 , PRO A:73 , TYR C:534 , GLU C:651 , HOH C:872BINDING SITE FOR RESIDUE GOL A 808
09AC9SOFTWARETYY B:405 , HIS B:456 , HIS B:458 , HIS B:624BINDING SITE FOR RESIDUE CU B 801
10BC1SOFTWAREGLU B:368 , LYS B:393 , TYR B:410 , ASP B:422 , ARG B:424 , HOH B:1100 , HOH B:1104BINDING SITE FOR RESIDUE GOL B 802
11BC2SOFTWAREHIS B:23 , TYR B:64 , LYS B:68 , LYS B:265 , HIS B:267 , ASP B:280 , HOH B:982BINDING SITE FOR RESIDUE GOL B 803
12BC3SOFTWAREPRO B:484 , PRO C:442BINDING SITE FOR RESIDUE GOL B 804
13BC4SOFTWAREPRO C:484 , TYR C:499BINDING SITE FOR RESIDUE GOL C 701
14BC5SOFTWARETYY C:405 , HIS C:456 , HIS C:458 , HIS C:624BINDING SITE FOR RESIDUE CU C 702
15BC6SOFTWAREHIS C:23 , TYR C:64 , LYS C:68 , LYS C:265 , ASP C:280 , HOH C:912BINDING SITE FOR RESIDUE GOL C 703
16BC7SOFTWAREGLY A:594 , HOH A:1105 , HOH A:1257 , HOH B:1072 , ARG C:163 , PHE C:310 , HOH C:1017BINDING SITE FOR RESIDUE GOL C 704
17BC8SOFTWARELYS C:393 , ASP C:422 , ARG C:424 , HOH C:1087BINDING SITE FOR RESIDUE GOL C 705

(-) SS Bonds  (3, 3)

Asymmetric Unit
No.Residues
1A:338 -A:364
2B:338 -B:364
3C:338 -C:364

(-) Cis Peptide Bonds  (9, 9)

Asymmetric Unit
No.Residues
1Phe A:310 -Pro A:311
2Gly A:441 -Pro A:442
3Phe A:631 -Pro A:632
4Phe B:310 -Pro B:311
5Gly B:441 -Pro B:442
6Phe B:631 -Pro B:632
7Phe C:310 -Pro C:311
8Gly C:441 -Pro C:442
9Phe C:631 -Pro C:632

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4KFF)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4KFF)

(-) Exons   (0, 0)

(no "Exon" information available for 4KFF)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:657
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .............hhhhhhhhhhhhhhhh....eeeeeeeee..hhhhhhhhhhh.......eeeeeeee.....eeeeeee....eeeeeeee.......hhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhh.eeeeeee............eeeeeeee......hhhhh....eeeee....eeeeee................hhhhhhhhhh...................eee..eeee..eeeeeeee...eeeeeeeeeee..eeeeeeeeeeeeeeeee......hhhh.eehhhhhh...................eeeeeeee.....eeeeeeeeeeeeeeeeeeeeee.hhhh...eeeeeeeeeeeeeeeee..eeeeeeeeee....eeeeeeeee....ee..........eeeee..eeee.eeeeeeeeeee.......eeeeeeeee...............eeeeeee..hhhhhh...hhhhh.eeeee.............eeeee............hhhhhhhhhhhh.eeeee.....................hhhhhhhh..........eeeeeeeeeee..hhhhh.....eeeeeeeeee..............eeehhhhhhhhh Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4kff A  16 AAPARPAHPLDPLSTAEIKAATNTVKSYFAGKKISFNTVTLREPARKAYIQWKEQGGPLPPRLAYYVILEAGKPGVKEGLVDLASLSVIETRALETVQPILTVEDLCSTEEVIRNDPAVIEQCVLSGIPANEMHKVYCDPWTIGYDERWGTGKRLQQALVYYRSDEDDSQYSHPLDFCPIVDTEEKKVIFIDIPNRRRKVSKHKHANFYPKHMIEKVGAMRPEAPPINVTQPEGVSFKMTGNVMEWSNFKFHIGFNYREGIVLSDVSYNDHGNVRPIFHRISLSEMIVPYGSPEFPHQRKHALDIGEYGAGYMTNPLSLGCDCKGVIHYLDAHFSDRAGDPITVKNAVCIHEEDDGLLFKHSDFRDNFATSLVTRATKLVVSQIFTAANyEYCLYWVFMQDGAIRLDIRLTGILNTYILGDDEEAGPWGTRVYPNVNAHNHQHLFSLRIDPRIDGDGNSAAACDAKSSPYPLGSPENMYGNAFYSEKTTFKTVKDSLTNYESATGRSWDIFNPNKVNPYSGKPPSYKLVSTQCPPLLAKEGSLVAKRAPWASHSVNVVPYKDNRLYPSGDHVPQWSGDGVRGMREWIGDGSENIDNTDILFFHTFGITHFPAPEDFPLMPAEPITLMLRPRHFFTENPGLDIQPSYAMTTSEAKRAV 672
                                    25        35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255       265       275       285       295       305       315       325       335       345       355       365       375       385       395       405       415       425       435       445       455       465       475       485       495       505       515       525       535       545       555       565       575       585       595       605       615       625       635       645       655       665       
                                                                                                                                                                                                                                                                                                                                                                                                                               405-TYY                                                                                                                                                                                                                                                                       


Chain B from PDB  Type:PROTEIN  Length:657
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .............hhhhhhhhhhhhhhhh....eeeeeeeee..hhhhhhhhhhh.......eeeeeeee.....eeeeeee....eeeeeeee.......hhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhh.eeeeeee............eeeeeeee......hhhhh....eeeee....eeeeee................hhhhhhhhhh.........eee.......eee..eeee..eeeeeeee...eeeeeeeeeee..eeeeeeeeeeeeeeeee......hhhh.eehhhhhh...................eeeeeeee.....eeeeeeeeeeeeeeeeeeeeee.hhhh...eeeeeeeeeeeeeeeee..eeeeeeeeee....eeeeeeeee....ee..........eeeee..eeee.eeeeeeeeeee.......eeeeeeeee...............eeeeeee..hhhhhh...hhhhh.eeeee.............eeeee............hhhhhhhhhhhh.eeeee.....................hhhhhhhh..........eeeeeeeeeee..hhhhh.....eeeeeeeeee..............eeehhhhhhhh. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4kff B  16 AAPARPAHPLDPLSTAEIKAATNTVKSYFAGKKISFNTVTLREPARKAYIQWKEQGGPLPPRLAYYVILEAGKPGVKEGLVDLASLSVIETRALETVQPILTVEDLCSTEEVIRNDPAVIEQCVLSGIPANEMHKVYCDPWTIGYDERWGTGKRLQQALVYYRSDEDDSQYSHPLDFCPIVDTEEKKVIFIDIPNRRRKVSKHKHANFYPKHMIEKVGAMRPEAPPINVTQPEGVSFKMTGNVMEWSNFKFHIGFNYREGIVLSDVSYNDHGNVRPIFHRISLSEMIVPYGSPEFPHQRKHALDIGEYGAGYMTNPLSLGCDCKGVIHYLDAHFSDRAGDPITVKNAVCIHEEDDGLLFKHSDFRDNFATSLVTRATKLVVSQIFTAANyEYCLYWVFMQDGAIRLDIRLTGILNTYILGDDEEAGPWGTRVYPNVNAHNHQHLFSLRIDPRIDGDGNSAAACDAKSSPYPLGSPENMYGNAFYSEKTTFKTVKDSLTNYESATGRSWDIFNPNKVNPYSGKPPSYKLVSTQCPPLLAKEGSLVAKRAPWASHSVNVVPYKDNRLYPSGDHVPQWSGDGVRGMREWIGDGSENIDNTDILFFHTFGITHFPAPEDFPLMPAEPITLMLRPRHFFTENPGLDIQPSYAMTTSEAKRAV 672
                                    25        35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255       265       275       285       295       305       315       325       335       345       355       365       375       385       395       405       415       425       435       445       455       465       475       485       495       505       515       525       535       545       555       565       575       585       595       605       615       625       635       645       655       665       
                                                                                                                                                                                                                                                                                                                                                                                                                               405-TYY                                                                                                                                                                                                                                                                       


Chain C from PDB  Type:PROTEIN  Length:656
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .............hhhhhhhhhhhhhhhh....eeeeeeeee..hhhhhhhhhhh.......eeeeeeee.....eeeeeee....eeeeeeee.......hhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhh.eeeeeee............eeeeeeee......hhhhh....eeeee....eeeeee................hhhhhhhhhh.........eee.......eee..eeee..eeeeeeee...eeeeeeeeeee..eeeeeeeeeeeeeeeee......hhhh.eehhhhhh...................eeeeeeee.....eeeeeeeeeeeeeeeeeeeeee.hhhh...eeeeeeeeeeeeeeeee..eeeeeeeee.....eeeeeeeee....ee..........eeeee..eeee.eeeeeeeeeee.......eeeeeeeee...............eeeeeee..hhhhhh...hhhhh.eeeee.............eeeee............hhhhhhhhhhhh.eeeee.....................hhhhhhhh..........eeeeeeeeeee..hhhhh..eeeeeeeeeeeee..............eeehhhhhhhh Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4kff C  16 AAPARPAHPLDPLSTAEIKAATNTVKSYFAGKKISFNTVTLREPARKAYIQWKEQGGPLPPRLAYYVILEAGKPGVKEGLVDLASLSVIETRALETVQPILTVEDLCSTEEVIRNDPAVIEQCVLSGIPANEMHKVYCDPWTIGYDERWGTGKRLQQALVYYRSDEDDSQYSHPLDFCPIVDTEEKKVIFIDIPNRRRKVSKHKHANFYPKHMIEKVGAMRPEAPPINVTQPEGVSFKMTGNVMEWSNFKFHIGFNYREGIVLSDVSYNDHGNVRPIFHRISLSEMIVPYGSPEFPHQRKHALDIGEYGAGYMTNPLSLGCDCKGVIHYLDAHFSDRAGDPITVKNAVCIHEEDDGLLFKHSDFRDNFATSLVTRATKLVVSQIFTAANyEYCLYWVFMQDGAIRLDIRLTGILNTYILGDDEEAGPWGTRVYPNVNAHNHQHLFSLRIDPRIDGDGNSAAACDAKSSPYPLGSPENMYGNAFYSEKTTFKTVKDSLTNYESATGRSWDIFNPNKVNPYSGKPPSYKLVSTQCPPLLAKEGSLVAKRAPWASHSVNVVPYKDNRLYPSGDHVPQWSGDGVRGMREWIGDGSENIDNTDILFFHTFGITHFPAPEDFPLMPAEPITLMLRPRHFFTENPGLDIQPSYAMTTSEAKRA 671
                                    25        35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255       265       275       285       295       305       315       325       335       345       355       365       375       385       395       405       415       425       435       445       455       465       475       485       495       505       515       525       535       545       555       565       575       585       595       605       615       625       635       645       655       665      
                                                                                                                                                                                                                                                                                                                                                                                                                               405-TYY
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4KFF)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4KFF)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4KFF)

(-) Gene Ontology  (12, 12)

Asymmetric Unit(hide GO term definitions)

 Visualization

(-) Interactive Views

Asymmetric Unit
  Complete Structure
    Jena3D(integrated viewing of ligand, site, SAP, PROSITE, SCOP information)
    WebMol | AstexViewer[tm]@PDBe
(Java Applets, require no local installation except for Java; loading may be slow)
    STRAP
(Java WebStart application, automatic local installation, requires Java; full application with system access!)
    RasMol
(require local installation)
    Molscript (VRML)
(requires installation of a VRML viewer; select preferred view via VRML and generate a mono or stereo PDF format file)
 
  Ligands, Modified Residues, Ions
    CU  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
    GOL  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
    TYY  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
 
  Sites
    AC1  [ RasMol ]  +environment [ RasMol ]
    AC2  [ RasMol ]  +environment [ RasMol ]
    AC3  [ RasMol ]  +environment [ RasMol ]
    AC4  [ RasMol ]  +environment [ RasMol ]
    AC5  [ RasMol ]  +environment [ RasMol ]
    AC6  [ RasMol ]  +environment [ RasMol ]
    AC7  [ RasMol ]  +environment [ RasMol ]
    AC8  [ RasMol ]  +environment [ RasMol ]
    AC9  [ RasMol ]  +environment [ RasMol ]
    BC1  [ RasMol ]  +environment [ RasMol ]
    BC2  [ RasMol ]  +environment [ RasMol ]
    BC3  [ RasMol ]  +environment [ RasMol ]
    BC4  [ RasMol ]  +environment [ RasMol ]
    BC5  [ RasMol ]  +environment [ RasMol ]
    BC6  [ RasMol ]  +environment [ RasMol ]
    BC7  [ RasMol ]  +environment [ RasMol ]
    BC8  [ RasMol ]  +environment [ RasMol ]
 
  Cis Peptide Bonds
    Gly A:441 - Pro A:442   [ RasMol ]  
    Gly B:441 - Pro B:442   [ RasMol ]  
    Gly C:441 - Pro C:442   [ RasMol ]  
    Phe A:310 - Pro A:311   [ RasMol ]  
    Phe A:631 - Pro A:632   [ RasMol ]  
    Phe B:310 - Pro B:311   [ RasMol ]  
    Phe B:631 - Pro B:632   [ RasMol ]  
    Phe C:310 - Pro C:311   [ RasMol ]  
    Phe C:631 - Pro C:632   [ RasMol ]  
 
Biological Units
  Complete Structure
    Biological Unit 1  [ Jena3D ]
    Biological Unit 2  [ Jena3D ]

(-) Still Images

Jmol
  protein: cartoon or spacefill or dots and stick; nucleic acid: cartoon and stick; ligands: spacefill; active site: stick
[ Asym. Unit PNG format | Asym. Unit - sites PNG format | Biol. Unit 1 PNG format | Biol. Unit 1 - sites PNG format | Biol. Unit 2 PNG format ](automatic orientation, automatically generated)
Molscript
  protein, nucleic acid: cartoon; ligands: spacefill; active site: ball and stick
[ mono PDF format | stereo PDF format ](default orientation, automatically generated)

 Databases and Analysis Tools

(-) Databases

Access by PDB/NDB ID
  4kff
    Family and Domain Information: ProDom | SYSTERS
    General Structural Information: GlycoscienceDB | MMDB | NDB | OCA | PDB | PDBe | PDBj | PDBsum | PDBWiki | PQS | PROTEOPEDIA
    Orientation in Membranes: OPM
    Protein Surface: SURFACE
    Secondary Structure: DSSP (structure derived) | HSSP (homology derived)
    Structural Genomics: GeneCensus
    Structural Neighbours: CE | VAST
    Structure Classification: CATH | Dali | SCOP
    Validation and Original Data: BMRB Data View | BMRB Restraints Grid | EDS | PROCHECK | RECOORD | WHAT_CHECK
 
Access by UniProt ID/Accession number
  AMO_PICAN | P12807
    Comparative Protein Structure Models: ModBase
    Genomic Information: Ensembl
    Protein-protein Interaction: DIP
    Sequence, Family and Domain Information: InterPro | Pfam | SMART | UniProtKB/SwissProt
 
Access by Enzyme Classificator   (EC Number)
  1.4.3.21
    General Enzyme Information: BRENDA | EC-PDB | Enzyme | IntEnz
    Pathway: KEGG | MetaCyc
 
Access by Disease Identifier   (MIM ID)
  (no 'MIM ID' available)
    Disease Information: OMIM
 
Access by GenAge ID
  (no 'GenAge ID' available)
    Age Related Information: GenAge

(-) Analysis Tools

Access by PDB/NDB ID
    Domain Information: XDom
    Interatomic Contacts of Structural Units: CSU
    Ligand-protein Contacts: LPC
    Protein Cavities: castP
    Sequence and Secondary Structure: PDBCartoon
    Structure Alignment: STRAP(Java WebStart application, automatic local installation, requires Java; full application with system access!)
    Structure and Sequence Browser: STING
 
Access by UniProt ID/Accession number
  AMO_PICAN | P12807
    Protein Disorder Prediction: DisEMBL | FoldIndex | GLOBPLOT (for more information see DisProt)

 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        AMO_PICAN | P12807: 1a2v 1ekm 2oov 2oqe 3n9h 3nbb 3nbj 3sx1 3sxx 3t0u 4ev2 4ev5 4kfd 4kfe

(-) Related Entries Specified in the PDB File

2oov CRYSTAL STRUCTURE OF NATIVE HANSENULA POLYMORPHA COPPER AMINE OXIDASE-1
4kfd
4kfe