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(-) Description

Title :  CRYSTAL STRUCTURE OF HANSENULA POLYMORPHA AMINE OXIDASE TO 1.7 ANGSTROMS
 
Authors :  B. J. Johnson, C. M. Wilmot
Date :  26 Jan 07  (Deposition) - 10 Apr 07  (Release) - 18 Apr 12  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.70
Chains :  Asym. Unit :  A,B,C,D,E,F
Biol. Unit 1:  A,B  (1x)
Biol. Unit 2:  C,D  (1x)
Biol. Unit 3:  E,F  (1x)
Biol. Unit 4:  A,B,C,D,E,F  (1x)
Keywords :  Protein-Derived Cofactor, Beta-Sandwich, Tpq, Oxidoreductase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  B. J. Johnson, J. Cohen, R. W. Welford, A. R. Pearson, K. Schulten, J. P. Klinman, C. M. Wilmot
Exploring Molecular Oxygen Pathways In Hansenula Polymorpha Copper-Containing Amine Oxidase
J. Biol. Chem. V. 282 17767 2007
PubMed-ID: 17409383  |  Reference-DOI: 10.1074/JBC.M701308200

(-) Compounds

Molecule 1 - PEROXISOMAL COPPER AMINE OXIDASE
    Chains: A, B
    EC Number: 1.4.3.6
    Engineered: YES
    Expression System: SACCHAROMYCES CEREVISIAE
    Expression System Common: BAKER'S YEAST
    Expression System Plasmid: PDB20
    Expression System Strain: CG379
    Expression System Taxid: 4932
    Expression System Vector Type: PLASMID
    Fragment: RESIDUES 13-672
    Gene: AMO
    Organism Scientific: PICHIA ANGUSTA
    Organism Taxid: 4905
    Synonym: METHYLAMINE OXIDASE
 
Molecule 2 - PEROXISOMAL COPPER AMINE OXIDASE
    Chains: C, D, E, F
    EC Number: 1.4.3.6
    Engineered: YES
    Expression System: SACCHAROMYCES CEREVISIAE
    Expression System Common: BAKER'S YEAST
    Expression System Plasmid: PDB20
    Expression System Strain: CG379
    Expression System Taxid: 4932
    Expression System Vector Type: PLASMID
    Fragment: RESIDUES 13-672
    Gene: AMO
    Organism Scientific: PICHIA ANGUSTA
    Organism Taxid: 4905
    Synonym: METHYLAMINE OXIDASE

 Structural Features

(-) Chains, Units

  123456
Asymmetric Unit : ABCDEF
Biological Unit 1 (1x): AB    
Biological Unit 2 (1x):   CD  
Biological Unit 3 (1x):     EF
Biological Unit 4 (1x): ABCDEF

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (5, 44)

Asymmetric Unit (5, 44)
No.NameCountTypeFull Name
1CU6Ligand/IonCOPPER (II) ION
2GOL28Ligand/IonGLYCEROL
3PO42Ligand/IonPHOSPHATE ION
4SME2Mod. Amino AcidMETHIONINE SULFOXIDE
5TPQ6Mod. Amino Acid5-(2-CARBOXY-2-AMINOETHYL)-2-HYDROXY-1,4-BENZOQUINONE
Biological Unit 1 (3, 16)
No.NameCountTypeFull Name
1CU-1Ligand/IonCOPPER (II) ION
2GOL12Ligand/IonGLYCEROL
3PO4-1Ligand/IonPHOSPHATE ION
4SME2Mod. Amino AcidMETHIONINE SULFOXIDE
5TPQ2Mod. Amino Acid5-(2-CARBOXY-2-AMINOETHYL)-2-HYDROXY-1,4-BENZOQUINONE
Biological Unit 2 (3, 9)
No.NameCountTypeFull Name
1CU-1Ligand/IonCOPPER (II) ION
2GOL6Ligand/IonGLYCEROL
3PO41Ligand/IonPHOSPHATE ION
4SME-1Mod. Amino AcidMETHIONINE SULFOXIDE
5TPQ2Mod. Amino Acid5-(2-CARBOXY-2-AMINOETHYL)-2-HYDROXY-1,4-BENZOQUINONE
Biological Unit 3 (3, 13)
No.NameCountTypeFull Name
1CU-1Ligand/IonCOPPER (II) ION
2GOL10Ligand/IonGLYCEROL
3PO41Ligand/IonPHOSPHATE ION
4SME-1Mod. Amino AcidMETHIONINE SULFOXIDE
5TPQ2Mod. Amino Acid5-(2-CARBOXY-2-AMINOETHYL)-2-HYDROXY-1,4-BENZOQUINONE
Biological Unit 4 (4, 38)
No.NameCountTypeFull Name
1CU-1Ligand/IonCOPPER (II) ION
2GOL28Ligand/IonGLYCEROL
3PO42Ligand/IonPHOSPHATE ION
4SME2Mod. Amino AcidMETHIONINE SULFOXIDE
5TPQ6Mod. Amino Acid5-(2-CARBOXY-2-AMINOETHYL)-2-HYDROXY-1,4-BENZOQUINONE

(-) Sites  (36, 36)

Asymmetric Unit (36, 36)
No.NameEvidenceResiduesDescription
01AC1SOFTWAREHIS A:456 , HIS A:458 , HIS A:624 , HOH A:6215BINDING SITE FOR RESIDUE CU A 801
02AC2SOFTWAREHIS B:456 , HIS B:458 , HIS B:624 , HOH B:6210BINDING SITE FOR RESIDUE CU B 801
03AC3SOFTWARETPQ C:405 , HIS C:456 , HIS C:458 , HIS C:624BINDING SITE FOR RESIDUE CU C 801
04AC4SOFTWARETPQ D:405 , LEU D:425 , HIS D:456 , HIS D:458 , HIS D:624 , HOH D:6751BINDING SITE FOR RESIDUE CU D 801
05AC5SOFTWARETPQ E:405 , HIS E:456 , HIS E:458 , HIS E:624 , HOH E:6752BINDING SITE FOR RESIDUE CU E 801
06AC6SOFTWARETPQ F:405 , HIS F:456 , HIS F:458 , HIS F:624BINDING SITE FOR RESIDUE CU F 801
07AC7SOFTWAREHIS C:218 , LYS C:219 , HOH C:6697 , HOH C:6762 , HOH C:6767BINDING SITE FOR RESIDUE PO4 C 6010
08AC8SOFTWAREHIS F:218 , LYS F:219 , HOH F:6701 , HOH F:6717BINDING SITE FOR RESIDUE PO4 F 6011
09AC9SOFTWAREHIS F:23 , TYR F:64 , LYS F:68 , LYS F:265 , ASP F:280 , HOH F:6166 , HOH F:6746BINDING SITE FOR RESIDUE GOL F 6001
10BC1SOFTWARELYS C:214 , VAL C:215 , ASP C:436 , HOH C:6215 , HOH C:6429 , HOH C:6812BINDING SITE FOR RESIDUE GOL C 6002
11BC2SOFTWAREPHE F:51 , ASN F:52 , THR F:117 , GLU F:119 , ASP F:120 , TYR F:327 , SER F:350 , ASP F:351 , ARG F:352 , HOH F:6198BINDING SITE FOR RESIDUE GOL F 6003
12BC3SOFTWAREARG B:213 , LYS B:214 , VAL B:215 , ASP B:436 , ASN B:450 , HOH B:6581 , HOH B:6758BINDING SITE FOR RESIDUE GOL B 6004
13BC4SOFTWARELYS A:214 , VAL A:215 , ASP A:436 , HOH A:6370BINDING SITE FOR RESIDUE GOL A 6005
14BC5SOFTWARELYS F:214 , VAL F:215 , GLY F:435 , ASP F:436 , HOH F:6453BINDING SITE FOR RESIDUE GOL F 6006
15BC6SOFTWARELYS C:393 , VAL C:412 , ASP C:422 , ARG C:424 , HOH C:6164 , HOH C:6785 , HOH C:6873BINDING SITE FOR RESIDUE GOL C 6007
16BC7SOFTWAREGLY E:371 , LYS F:393 , ASP F:422 , ARG F:424 , HOH F:6112 , HOH F:6644 , HOH F:6687BINDING SITE FOR RESIDUE GOL F 6008
17BC8SOFTWAREGLY A:371 , GLU B:368 , LYS B:393 , TYR B:410 , ARG B:420 , ASP B:422 , ARG B:424 , HOH B:6156 , HOH B:6507 , HOH B:6677 , HOH B:6774BINDING SITE FOR RESIDUE GOL B 6009
18BC9SOFTWAREGLU A:368 , LYS A:393 , VAL A:412 , ARG A:420 , ASP A:422 , HOH A:6118 , HOH A:6557 , HOH A:6789 , GLY B:371BINDING SITE FOR RESIDUE GOL A 6012
19CC1SOFTWAREARG A:61 , LYS A:62 , ASP A:471 , ASP A:613 , HOH A:6623 , HOH A:6707BINDING SITE FOR RESIDUE GOL A 6013
20CC2SOFTWARELYS E:214 , VAL E:215 , ASP E:436 , HOH E:6235 , HOH E:6791 , HOH E:6792 , HOH E:6793BINDING SITE FOR RESIDUE GOL E 6014
21CC3SOFTWAREASP A:471 , HOH A:6707 , HIS E:218 , LYS E:219 , TYR E:448 , HOH E:6415BINDING SITE FOR RESIDUE GOL E 6015
22CC4SOFTWAREPRO E:442 , TRP E:443 , PRO F:484 , TYR F:499BINDING SITE FOR RESIDUE GOL E 6016
23CC5SOFTWAREARG A:163 , PHE A:310 , HOH A:6315 , HOH A:6442 , HOH A:6632 , HOH A:6844 , HOH B:6144 , ASP F:593 , GLY F:594BINDING SITE FOR RESIDUE GOL A 6017
24CC6SOFTWAREHIS A:218 , LYS A:219 , TYR A:448 , HOH A:6471BINDING SITE FOR RESIDUE GOL A 6018
25CC7SOFTWARELYS E:393 , VAL E:412 , ARG E:420 , ASP E:422 , ARG E:424 , HOH E:6067 , HOH E:6621 , HOH E:6664 , HOH E:6713 , GLY F:371BINDING SITE FOR RESIDUE GOL E 6019
26CC8SOFTWAREPRO E:484 , PRO F:442BINDING SITE FOR RESIDUE GOL E 6020
27CC9SOFTWAREHIS C:286 , PHE C:649 , THR C:650 , GLU C:651 , PRO C:653 , GOL C:6029 , HOH C:6125 , HOH C:6181 , HOH C:6294 , HOH C:6530BINDING SITE FOR RESIDUE GOL C 6021
28DC1SOFTWAREILE E:208 , PRO E:209 , ASN E:210 , PHE E:310 , HOH E:6131 , HOH E:6282 , HOH E:6674BINDING SITE FOR RESIDUE GOL E 6022
29DC2SOFTWAREGLY B:142 , PRO B:144 , GLU B:147 , TYR B:177 , HOH B:6704 , HOH D:6484BINDING SITE FOR RESIDUE GOL B 6023
30DC3SOFTWAREPRO B:484 , TYR B:499 , HOH B:6808BINDING SITE FOR RESIDUE GOL B 6024
31DC4SOFTWAREGLY B:603 , ASP B:604 , HOH B:6375 , HOH B:6599 , PRO D:490 , GLU D:491BINDING SITE FOR RESIDUE GOL B 6025
32DC5SOFTWAREHIS B:218 , LYS B:219 , TYR B:448 , HOH B:6275 , HOH B:6757BINDING SITE FOR RESIDUE GOL B 6026
33DC6SOFTWAREPRO A:484 , TYR A:485 , TYR A:499 , HOH A:6829 , HOH A:6862 , PRO B:442BINDING SITE FOR RESIDUE GOL A 6027
34DC7SOFTWAREARG D:20 , PRO D:21 , LEU D:74 , PRO D:75 , ARG D:77 , HOH D:6304 , HOH D:6372 , HOH D:6662 , HOH D:6867BINDING SITE FOR RESIDUE GOL D 6028
35DC8SOFTWAREGLN B:66 , GLN B:70 , GLY B:72 , TYR C:534 , THR C:650 , GLU C:651 , GOL C:6021 , HOH C:6076 , HOH C:6530 , TYR D:448BINDING SITE FOR RESIDUE GOL C 6029
36DC9SOFTWAREGLY C:371 , LYS D:393 , VAL D:412 , ARG D:420 , ASP D:422 , ARG D:424 , HOH D:6088 , HOH D:6516 , HOH D:6744 , HOH D:6769BINDING SITE FOR RESIDUE GOL D 6030

(-) SS Bonds  (6, 6)

Asymmetric Unit
No.Residues
1A:338 -A:364
2B:338 -B:364
3C:338 -C:364
4D:338 -D:364
5E:338 -E:364
6F:338 -F:364

(-) Cis Peptide Bonds  (20, 20)

Asymmetric Unit
No.Residues
1Phe A:310 -Pro A:311
2Gly A:441 -Pro A:442
3Phe A:631 -Pro A:632
4Phe B:310 -Pro B:311
5Gly B:441 -Pro B:442
6Phe B:631 -Pro B:632
7Phe C:310 -Pro C:311
8Ser C:333 -Leu C:334
9Leu C:334 -Gly C:335
10Gly C:441 -Pro C:442
11Phe C:631 -Pro C:632
12Phe D:310 -Pro D:311
13Gly D:441 -Pro D:442
14Phe D:631 -Pro D:632
15Phe E:310 -Pro E:311
16Gly E:441 -Pro E:442
17Phe E:631 -Pro E:632
18Phe F:310 -Pro F:311
19Gly F:441 -Pro F:442
20Phe F:631 -Pro F:632

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 2OOV)

(-) PROSITE Motifs  (2, 12)

Asymmetric Unit (2, 12)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1COPPER_AMINE_OXID_1PS01164 Copper amine oxidase topaquinone signature.AMO_PICAN394-407
 
 
 
 
 		  6A:394-407
B:394-407
C:394-407
D:394-407
E:394-407
F:394-407
2COPPER_AMINE_OXID_2PS01165 Copper amine oxidase copper-binding site signature.AMO_PICAN619-632
 
 
 
 
 		  6A:619-632
B:619-632
C:619-632
D:619-632
E:619-632
F:619-632
Biological Unit 1 (2, 4)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1COPPER_AMINE_OXID_1PS01164 Copper amine oxidase topaquinone signature.AMO_PICAN394-407
 
 
 
 
 		  2A:394-407
B:394-407
-
-
-
-
2COPPER_AMINE_OXID_2PS01165 Copper amine oxidase copper-binding site signature.AMO_PICAN619-632
 
 
 
 
 		  2A:619-632
B:619-632
-
-
-
-
Biological Unit 2 (2, 4)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1COPPER_AMINE_OXID_1PS01164 Copper amine oxidase topaquinone signature.AMO_PICAN394-407
 
 
 
 
 		  2-
-
C:394-407
D:394-407
-
-
2COPPER_AMINE_OXID_2PS01165 Copper amine oxidase copper-binding site signature.AMO_PICAN619-632
 
 
 
 
 		  2-
-
C:619-632
D:619-632
-
-
Biological Unit 3 (2, 4)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1COPPER_AMINE_OXID_1PS01164 Copper amine oxidase topaquinone signature.AMO_PICAN394-407
 
 
 
 
 		  2-
-
-
-
E:394-407
F:394-407
2COPPER_AMINE_OXID_2PS01165 Copper amine oxidase copper-binding site signature.AMO_PICAN619-632
 
 
 
 
 		  2-
-
-
-
E:619-632
F:619-632
Biological Unit 4 (2, 12)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1COPPER_AMINE_OXID_1PS01164 Copper amine oxidase topaquinone signature.AMO_PICAN394-407
 
 
 
 
 		  6A:394-407
B:394-407
C:394-407
D:394-407
E:394-407
F:394-407
2COPPER_AMINE_OXID_2PS01165 Copper amine oxidase copper-binding site signature.AMO_PICAN619-632
 
 
 
 
 		  6A:619-632
B:619-632
C:619-632
D:619-632
E:619-632
F:619-632

(-) Exons   (0, 0)

(no "Exon" information available for 2OOV)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:655
 aligned with AMO_PICAN | P12807 from UniProtKB/Swiss-Prot  Length:692

    Alignment length:655
                                    27        37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437       447       457       467       477       487       497       507       517       527       537       547       557       567       577       587       597       607       617       627       637       647       657       667     
            AMO_PICAN    18 PARPAHPLDPLSTAEIKAATNTVKSYFAGKKISFNTVTLREPARKAYIQWKEQGGPLPPRLAYYVILEAGKPGVKEGLVDLASLSVIETRALETVQPILTVEDLCSTEEVIRNDPAVIEQCVLSGIPANEMHKVYCDPWTIGYDERWGTGKRLQQALVYYRSDEDDSQYSHPLDFCPIVDTEEKKVIFIDIPNRRRKVSKHKHANFYPKHMIEKVGAMRPEAPPINVTQPEGVSFKMTGNVMEWSNFKFHIGFNYREGIVLSDVSYNDHGNVRPIFHRISLSEMIVPYGSPEFPHQRKHALDIGEYGAGYMTNPLSLGCDCKGVIHYLDAHFSDRAGDPITVKNAVCIHEEDDGLLFKHSDFRDNFATSLVTRATKLVVSQIFTAANYEYCLYWVFMQDGAIRLDIRLTGILNTYILGDDEEAGPWGTRVYPNVNAHNHQHLFSLRIDPRIDGDGNSAAACDAKSSPYPLGSPENMYGNAFYSEKTTFKTVKDSLTNYESATGRSWDIFNPNKVNPYSGKPPSYKLVSTQCPPLLAKEGSLVAKRAPWASHSVNVVPYKDNRLYPSGDHVPQWSGDGVRGMREWIGDGSENIDNTDILFFHTFGITHFPAPEDFPLMPAEPITLMLRPRHFFTENPGLDIQPSYAMTTSEAKRAV 672
               SCOP domains d2oova2 A:18-115 Copper amine oxidase, domains 1 and 2                                            d2oova3 A:116-236 Copper amine oxidase, domains 1 and 2                                                                  d2oova1 A:237-672 Copper amine oxidase, domain 3                                                                                                                                                                                                                                                                                                                                                                                                     SCOP domains
               CATH domains 2oovA01 A:18-117  [code=3.10.450.40, no name defined]                                               -----2oovA02 A:123-231  [code=3.10.450.40, no name defined]                                                       2oovA03 A:232-670 Copper amine oxidase, Domain 3                                                                                                                                                                                                                                                                                                                                                                                                       -- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...........hhhhhhhhhhhhhhhh....eeeeeeeee..hhhhhhhhhhh.......eeeeeeee.....eeeeeee....eeeeeeee.......hhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhh.eeeeeee............eeeeeeee......hhhhh....eeeee....eeeeee................hhhhhhhhhh.........eee.......eee..eeee..eeeeeeee...eeeeeeeeeee..eeeeeeeeeeeeeeeee......hhhh.eehhhhhh...................eeeeeeee.....eeeeeeeeeeeeeeeeeeeeee.hhhh...eeeeeeeeeeeeeeeee..eeeeeeeeee....eeeeeeeee....ee..........eeeee..eeee.eeeeeeeeeee.......eeeeeeeee...............eeeeeee..hhhhhh...hhhhh.eeeee.............eeeee............hhhhhhhhhhhh.eeeee.....................hhhhhhhh..........eeeeeeeeeee..hhhhh.....eeeeeeeeee..............eeehhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------COPPER_AMINE_O-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------COPPER_AMINE_O---------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2oov A  18 PARPAHPLDPLSTAEIKAATNTVKSYFAGKKISFNTVTLREPARKAYIQWKEQGGPLPPRLAYYVILEAGKPGVKEGLVDLASLSVIETRALETVQPILTVEDLCSTEEVIRNDPAVIEQCVLSGIPANEMHKVYCDPWTIGYDERWGTGKRLQQALVYYRSDEDDSQYSHPLDFCPIVDTEEKKVIFIDIPNRRRKVSKHKHANFYPKHMIEKVGAMRPEAPPINVTQPEGVSFKMTGNVMEWSNFKFHIGFNYREGIVLSDVSYNDHGNVRPIFHRISLSEMIVPYGSPEFPHQRKHALDIGEYGAGYMTNPLSLGCDCKGVIHYLDAHFSDRAGDPITVKNAVCIHEEDDGLLFKHSDFRDNFATSLVTRATKLVVSQIFTAANyEYCLYWVFMQDGAIRLDIRLTGILNTYILGDDEEAGPWGTRVYPNVNAHNHQHLFSLRIDPRIDGDGNSAAACDAKSSPYPLGSPENMYGNAFYSEKTTFKTVKDSLTNYESATGRSWDIFNPNKVNPYSGKPPSYKLVSTQCPPLLAKEGSLVAKRAPWASHSVNVVPYKDNRLYPSGDHVPQWSGDGVRGMREWIGDGSENIDNTDILFFHTFGITHFPAPEDFPLmPAEPITLMLRPRHFFTENPGLDIQPSYAMTTSEAKRAV 672
                                    27        37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437       447       457       467       477       487       497       507       517       527       537       547       557       567       577       587       597       607       617       627      |637       647       657       667     
                                                                                                                                                                                                                                                                                                                                                                                                                             405-TPQ                                                                                                                                                                                                                              634-SME                                  


Chain B from PDB  Type:PROTEIN  Length:655
 aligned with AMO_PICAN | P12807 from UniProtKB/Swiss-Prot  Length:692

    Alignment length:655
                                    27        37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437       447       457       467       477       487       497       507       517       527       537       547       557       567       577       587       597       607       617       627       637       647       657       667     
            AMO_PICAN    18 PARPAHPLDPLSTAEIKAATNTVKSYFAGKKISFNTVTLREPARKAYIQWKEQGGPLPPRLAYYVILEAGKPGVKEGLVDLASLSVIETRALETVQPILTVEDLCSTEEVIRNDPAVIEQCVLSGIPANEMHKVYCDPWTIGYDERWGTGKRLQQALVYYRSDEDDSQYSHPLDFCPIVDTEEKKVIFIDIPNRRRKVSKHKHANFYPKHMIEKVGAMRPEAPPINVTQPEGVSFKMTGNVMEWSNFKFHIGFNYREGIVLSDVSYNDHGNVRPIFHRISLSEMIVPYGSPEFPHQRKHALDIGEYGAGYMTNPLSLGCDCKGVIHYLDAHFSDRAGDPITVKNAVCIHEEDDGLLFKHSDFRDNFATSLVTRATKLVVSQIFTAANYEYCLYWVFMQDGAIRLDIRLTGILNTYILGDDEEAGPWGTRVYPNVNAHNHQHLFSLRIDPRIDGDGNSAAACDAKSSPYPLGSPENMYGNAFYSEKTTFKTVKDSLTNYESATGRSWDIFNPNKVNPYSGKPPSYKLVSTQCPPLLAKEGSLVAKRAPWASHSVNVVPYKDNRLYPSGDHVPQWSGDGVRGMREWIGDGSENIDNTDILFFHTFGITHFPAPEDFPLMPAEPITLMLRPRHFFTENPGLDIQPSYAMTTSEAKRAV 672
               SCOP domains d2oovb2 B:18-115 Copper amine oxidase, domains 1 and 2                                            d2oovb3 B:116-236 Copper amine oxidase, domains 1 and 2                                                                  d2oovb1 B:237-672 Copper amine oxidase, domain 3                                                                                                                                                                                                                                                                                                                                                                                                     SCOP domains
               CATH domains 2oovB01 B:18-117  [code=3.10.450.40, no name defined]                                               -----2oovB02 B:123-231  [code=3.10.450.40, no name defined]                                                       2oovB03 B:232-670 Copper amine oxidase, Domain 3                                                                                                                                                                                                                                                                                                                                                                                                       -- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...........hhhhhhhhhhhhhhhh....eeeeeeeee..hhhhhhhhhhh.......eeeeeeee.....eeeeeee....eeeeeeee.......hhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhh.eeeeeee............eeeeeeee......hhhhh....eeeee....eeeeee................hhhhhhhhhh.........eee.......eee..eeee..eeeeeeee...eeeeeeeeeee..eeeeeeeeeeeeeeeee......hhhh.eehhhhhh...................eeeeeeee.....eeeeeeeeeeeeeeeeeeeeee.hhhh...eeeeeeeeeeeeeeeee..eeeeeeeee.....eeeeeeeee....ee..........eeeee..eeee.eeeeeeeeeee.......eeeeeeeee...............eeeeeee..hhhhhh...hhhhh.eeeee.............eeeee............hhhhhhhhhhhh.eeeee.....................hhhhhhhh..........eeeeeeeeeee..hhhhh.....eeeeeeeeee..............eeehhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------COPPER_AMINE_O-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------COPPER_AMINE_O---------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2oov B  18 PARPAHPLDPLSTAEIKAATNTVKSYFAGKKISFNTVTLREPARKAYIQWKEQGGPLPPRLAYYVILEAGKPGVKEGLVDLASLSVIETRALETVQPILTVEDLCSTEEVIRNDPAVIEQCVLSGIPANEMHKVYCDPWTIGYDERWGTGKRLQQALVYYRSDEDDSQYSHPLDFCPIVDTEEKKVIFIDIPNRRRKVSKHKHANFYPKHMIEKVGAMRPEAPPINVTQPEGVSFKMTGNVMEWSNFKFHIGFNYREGIVLSDVSYNDHGNVRPIFHRISLSEMIVPYGSPEFPHQRKHALDIGEYGAGYMTNPLSLGCDCKGVIHYLDAHFSDRAGDPITVKNAVCIHEEDDGLLFKHSDFRDNFATSLVTRATKLVVSQIFTAANyEYCLYWVFMQDGAIRLDIRLTGILNTYILGDDEEAGPWGTRVYPNVNAHNHQHLFSLRIDPRIDGDGNSAAACDAKSSPYPLGSPENMYGNAFYSEKTTFKTVKDSLTNYESATGRSWDIFNPNKVNPYSGKPPSYKLVSTQCPPLLAKEGSLVAKRAPWASHSVNVVPYKDNRLYPSGDHVPQWSGDGVRGMREWIGDGSENIDNTDILFFHTFGITHFPAPEDFPLmPAEPITLMLRPRHFFTENPGLDIQPSYAMTTSEAKRAV 672
                                    27        37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437       447       457       467       477       487       497       507       517       527       537       547       557       567       577       587       597       607       617       627      |637       647       657       667     
                                                                                                                                                                                                                                                                                                                                                                                                                             405-TPQ                                                                                                                                                                                                                              634-SME                                  


Chain C from PDB  Type:PROTEIN  Length:655
 aligned with AMO_PICAN | P12807 from UniProtKB/Swiss-Prot  Length:692

    Alignment length:655
                                    27        37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437       447       457       467       477       487       497       507       517       527       537       547       557       567       577       587       597       607       617       627       637       647       657       667     
            AMO_PICAN    18 PARPAHPLDPLSTAEIKAATNTVKSYFAGKKISFNTVTLREPARKAYIQWKEQGGPLPPRLAYYVILEAGKPGVKEGLVDLASLSVIETRALETVQPILTVEDLCSTEEVIRNDPAVIEQCVLSGIPANEMHKVYCDPWTIGYDERWGTGKRLQQALVYYRSDEDDSQYSHPLDFCPIVDTEEKKVIFIDIPNRRRKVSKHKHANFYPKHMIEKVGAMRPEAPPINVTQPEGVSFKMTGNVMEWSNFKFHIGFNYREGIVLSDVSYNDHGNVRPIFHRISLSEMIVPYGSPEFPHQRKHALDIGEYGAGYMTNPLSLGCDCKGVIHYLDAHFSDRAGDPITVKNAVCIHEEDDGLLFKHSDFRDNFATSLVTRATKLVVSQIFTAANYEYCLYWVFMQDGAIRLDIRLTGILNTYILGDDEEAGPWGTRVYPNVNAHNHQHLFSLRIDPRIDGDGNSAAACDAKSSPYPLGSPENMYGNAFYSEKTTFKTVKDSLTNYESATGRSWDIFNPNKVNPYSGKPPSYKLVSTQCPPLLAKEGSLVAKRAPWASHSVNVVPYKDNRLYPSGDHVPQWSGDGVRGMREWIGDGSENIDNTDILFFHTFGITHFPAPEDFPLMPAEPITLMLRPRHFFTENPGLDIQPSYAMTTSEAKRAV 672
               SCOP domains d2oovc2 C:18-115 Copper amine oxidase, domains 1 and 2                                            d2oovc3 C:116-236 Copper amine oxidase, domains 1 and 2                                                                  d2oovc1 C:237-672 Copper amine oxidase, domain 3                                                                                                                                                                                                                                                                                                                                                                                                     SCOP domains
               CATH domains 2oovC01 C:18-117  [code=3.10.450.40, no name defined]                                               -----2oovC02 C:123-231  [code=3.10.450.40, no name defined]                                                       2oovC03 C:232-670 Copper amine oxidase, Domain 3                                                                                                                                                                                                                                                                                                                                                                                                       -- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...........hhhhhhhhhhhhhhhh....eeeeeeeee..hhhhhhhhhhh.......eeeeeeee.....eeeeeee....eeeeeeee.......hhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhh.eeeeeee............eeeeeeee......hhhhh....eeeee....eeeeee................hhhhhhhhhh.........eee.......eee..eeee..eeeeeeee...eeeeeeeeeee..eeeeeeeeeeeeeeeee......hhhh.eehhhhhh...................eeeeeeee.....eeeeeeeeeeeeeeeeeeeeee.hhhh...eeeeeeeeeeeeeeeee..eeeeeeeeee....eeeeeeeee....ee..........eeeee..eeee.eeeeeeeeeee.......eeeeeeeee...............eeeeeee..hhhhhh...hhhhh.eeeee.............eeeee............hhhhhhhhhhhh.eeeee.....................hhhhhhhh..........eeeeeeeeeee..hhhhh..eeeeeeeeeeeee..............eeehhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------COPPER_AMINE_O-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------COPPER_AMINE_O---------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2oov C  18 PARPAHPLDPLSTAEIKAATNTVKSYFAGKKISFNTVTLREPARKAYIQWKEQGGPLPPRLAYYVILEAGKPGVKEGLVDLASLSVIETRALETVQPILTVEDLCSTEEVIRNDPAVIEQCVLSGIPANEMHKVYCDPWTIGYDERWGTGKRLQQALVYYRSDEDDSQYSHPLDFCPIVDTEEKKVIFIDIPNRRRKVSKHKHANFYPKHMIEKVGAMRPEAPPINVTQPEGVSFKMTGNVMEWSNFKFHIGFNYREGIVLSDVSYNDHGNVRPIFHRISLSEMIVPYGSPEFPHQRKHALDIGEYGAGYMTNPLSLGCDCKGVIHYLDAHFSDRAGDPITVKNAVCIHEEDDGLLFKHSDFRDNFATSLVTRATKLVVSQIFTAANyEYCLYWVFMQDGAIRLDIRLTGILNTYILGDDEEAGPWGTRVYPNVNAHNHQHLFSLRIDPRIDGDGNSAAACDAKSSPYPLGSPENMYGNAFYSEKTTFKTVKDSLTNYESATGRSWDIFNPNKVNPYSGKPPSYKLVSTQCPPLLAKEGSLVAKRAPWASHSVNVVPYKDNRLYPSGDHVPQWSGDGVRGMREWIGDGSENIDNTDILFFHTFGITHFPAPEDFPLMPAEPITLMLRPRHFFTENPGLDIQPSYAMTTSEAKRAV 672
                                    27        37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437       447       457       467       477       487       497       507       517       527       537       547       557       567       577       587       597       607       617       627       637       647       657       667     
                                                                                                                                                                                                                                                                                                                                                                                                                             405-TPQ                                                                                                                                                                                                                                                                       


Chain D from PDB  Type:PROTEIN  Length:655
 aligned with AMO_PICAN | P12807 from UniProtKB/Swiss-Prot  Length:692

    Alignment length:655
                                    27        37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437       447       457       467       477       487       497       507       517       527       537       547       557       567       577       587       597       607       617       627       637       647       657       667     
            AMO_PICAN    18 PARPAHPLDPLSTAEIKAATNTVKSYFAGKKISFNTVTLREPARKAYIQWKEQGGPLPPRLAYYVILEAGKPGVKEGLVDLASLSVIETRALETVQPILTVEDLCSTEEVIRNDPAVIEQCVLSGIPANEMHKVYCDPWTIGYDERWGTGKRLQQALVYYRSDEDDSQYSHPLDFCPIVDTEEKKVIFIDIPNRRRKVSKHKHANFYPKHMIEKVGAMRPEAPPINVTQPEGVSFKMTGNVMEWSNFKFHIGFNYREGIVLSDVSYNDHGNVRPIFHRISLSEMIVPYGSPEFPHQRKHALDIGEYGAGYMTNPLSLGCDCKGVIHYLDAHFSDRAGDPITVKNAVCIHEEDDGLLFKHSDFRDNFATSLVTRATKLVVSQIFTAANYEYCLYWVFMQDGAIRLDIRLTGILNTYILGDDEEAGPWGTRVYPNVNAHNHQHLFSLRIDPRIDGDGNSAAACDAKSSPYPLGSPENMYGNAFYSEKTTFKTVKDSLTNYESATGRSWDIFNPNKVNPYSGKPPSYKLVSTQCPPLLAKEGSLVAKRAPWASHSVNVVPYKDNRLYPSGDHVPQWSGDGVRGMREWIGDGSENIDNTDILFFHTFGITHFPAPEDFPLMPAEPITLMLRPRHFFTENPGLDIQPSYAMTTSEAKRAV 672
               SCOP domains d2oovd2 D:18-115 Copper amine oxidase, domains 1 and 2                                            d2oovd3 D:116-236 Copper amine oxidase, domains 1 and 2                                                                  d2oovd1 D:237-672 Copper amine oxidase, domain 3                                                                                                                                                                                                                                                                                                                                                                                                     SCOP domains
               CATH domains 2oovD01 D:18-117  [code=3.10.450.40, no name defined]                                               -----2oovD02 D:123-231  [code=3.10.450.40, no name defined]                                                       2oovD03 D:232-670 Copper amine oxidase, Domain 3                                                                                                                                                                                                                                                                                                                                                                                                       -- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...........hhhhhhhhhhhhhhhh....eeeeeeeee..hhhhhhhhhhh.......eeeeeeee.....eeeeeee....eeeeeeee.......hhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhh.eeeeeee............eeeeeeee......hhhhh....eeeee....eeeeee................hhhhhhhhhh.........eee.......eee..eeee..eeeeeeee...eeeeeeeeeee..eeeeeeeeeeeeeeeee......hhhh.eehhhhhh...................eeeeeeee.....eeeeeeeeeeeeeeeeeeeeee.hhhh...eeeeeeeeeeeeeeeee..eeeeeeeeee....eeeeeeeee....ee..........eeeee..eeee.eeeeeeeeeee.......eeeeeeeee...............eeeeeee..hhhhhh...hhhhh.eeeee.............eeeee............hhhhhhhhhhhh.eeeee.....................hhhhhhhh..........eeeeeeeeeee..hhhhh..eeeeeeeeeeeee..............eeehhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------COPPER_AMINE_O-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------COPPER_AMINE_O---------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2oov D  18 PARPAHPLDPLSTAEIKAATNTVKSYFAGKKISFNTVTLREPARKAYIQWKEQGGPLPPRLAYYVILEAGKPGVKEGLVDLASLSVIETRALETVQPILTVEDLCSTEEVIRNDPAVIEQCVLSGIPANEMHKVYCDPWTIGYDERWGTGKRLQQALVYYRSDEDDSQYSHPLDFCPIVDTEEKKVIFIDIPNRRRKVSKHKHANFYPKHMIEKVGAMRPEAPPINVTQPEGVSFKMTGNVMEWSNFKFHIGFNYREGIVLSDVSYNDHGNVRPIFHRISLSEMIVPYGSPEFPHQRKHALDIGEYGAGYMTNPLSLGCDCKGVIHYLDAHFSDRAGDPITVKNAVCIHEEDDGLLFKHSDFRDNFATSLVTRATKLVVSQIFTAANyEYCLYWVFMQDGAIRLDIRLTGILNTYILGDDEEAGPWGTRVYPNVNAHNHQHLFSLRIDPRIDGDGNSAAACDAKSSPYPLGSPENMYGNAFYSEKTTFKTVKDSLTNYESATGRSWDIFNPNKVNPYSGKPPSYKLVSTQCPPLLAKEGSLVAKRAPWASHSVNVVPYKDNRLYPSGDHVPQWSGDGVRGMREWIGDGSENIDNTDILFFHTFGITHFPAPEDFPLMPAEPITLMLRPRHFFTENPGLDIQPSYAMTTSEAKRAV 672
                                    27        37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437       447       457       467       477       487       497       507       517       527       537       547       557       567       577       587       597       607       617       627       637       647       657       667     
                                                                                                                                                                                                                                                                                                                                                                                                                             405-TPQ                                                                                                                                                                                                                                                                       


Chain E from PDB  Type:PROTEIN  Length:655
 aligned with AMO_PICAN | P12807 from UniProtKB/Swiss-Prot  Length:692

    Alignment length:655
                                    27        37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437       447       457       467       477       487       497       507       517       527       537       547       557       567       577       587       597       607       617       627       637       647       657       667     
            AMO_PICAN    18 PARPAHPLDPLSTAEIKAATNTVKSYFAGKKISFNTVTLREPARKAYIQWKEQGGPLPPRLAYYVILEAGKPGVKEGLVDLASLSVIETRALETVQPILTVEDLCSTEEVIRNDPAVIEQCVLSGIPANEMHKVYCDPWTIGYDERWGTGKRLQQALVYYRSDEDDSQYSHPLDFCPIVDTEEKKVIFIDIPNRRRKVSKHKHANFYPKHMIEKVGAMRPEAPPINVTQPEGVSFKMTGNVMEWSNFKFHIGFNYREGIVLSDVSYNDHGNVRPIFHRISLSEMIVPYGSPEFPHQRKHALDIGEYGAGYMTNPLSLGCDCKGVIHYLDAHFSDRAGDPITVKNAVCIHEEDDGLLFKHSDFRDNFATSLVTRATKLVVSQIFTAANYEYCLYWVFMQDGAIRLDIRLTGILNTYILGDDEEAGPWGTRVYPNVNAHNHQHLFSLRIDPRIDGDGNSAAACDAKSSPYPLGSPENMYGNAFYSEKTTFKTVKDSLTNYESATGRSWDIFNPNKVNPYSGKPPSYKLVSTQCPPLLAKEGSLVAKRAPWASHSVNVVPYKDNRLYPSGDHVPQWSGDGVRGMREWIGDGSENIDNTDILFFHTFGITHFPAPEDFPLMPAEPITLMLRPRHFFTENPGLDIQPSYAMTTSEAKRAV 672
               SCOP domains d2oove2 E:18-115 Copper amine oxidase, domains 1 and 2                                            d2oove3 E:116-236 Copper amine oxidase, domains 1 and 2                                                                  d2oove1 E:237-672 Copper amine oxidase, domain 3                                                                                                                                                                                                                                                                                                                                                                                                     SCOP domains
               CATH domains 2oovE01 E:18-117  [code=3.10.450.40, no name defined]                                               -----2oovE02 E:123-231  [code=3.10.450.40, no name defined]                                                       2oovE03 E:232-670 Copper amine oxidase, Domain 3                                                                                                                                                                                                                                                                                                                                                                                                       -- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...........hhhhhhhhhhhhhhhh....eeeeeeeee..hhhhhhhhhhh.......eeeeeeee.....eeeeeee....eeeeeeee.......hhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhh.eeeeeee............eeeeeeee......hhhhh....eeeee....eeeeee................hhhhhhhhhh.........eee.......eee..eeee..eeeeeeee...eeeeeeeeeee..eeeeeeeeeeeeeeeee......hhhh.eehhhhhh...................eeeeeeee.....eeeeeeeeeeeeeeeeeeeeee.hhhh...eeeeeeeeeeeeeeeee..eeeeeeeeee....eeeeeeeee....ee..........eeeee..eeee.eeeeeeeeeee.......eeeeeeeee...............eeeeeee..hhhhhh...hhhhh.eeeee.............eeeee............hhhhhhhhhhhh.eeeee.....................hhhhhhhh..........eeeeeeeeeee..hhhhh..eeeeeeeeeeeee..............eeehhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------COPPER_AMINE_O-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------COPPER_AMINE_O---------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2oov E  18 PARPAHPLDPLSTAEIKAATNTVKSYFAGKKISFNTVTLREPARKAYIQWKEQGGPLPPRLAYYVILEAGKPGVKEGLVDLASLSVIETRALETVQPILTVEDLCSTEEVIRNDPAVIEQCVLSGIPANEMHKVYCDPWTIGYDERWGTGKRLQQALVYYRSDEDDSQYSHPLDFCPIVDTEEKKVIFIDIPNRRRKVSKHKHANFYPKHMIEKVGAMRPEAPPINVTQPEGVSFKMTGNVMEWSNFKFHIGFNYREGIVLSDVSYNDHGNVRPIFHRISLSEMIVPYGSPEFPHQRKHALDIGEYGAGYMTNPLSLGCDCKGVIHYLDAHFSDRAGDPITVKNAVCIHEEDDGLLFKHSDFRDNFATSLVTRATKLVVSQIFTAANyEYCLYWVFMQDGAIRLDIRLTGILNTYILGDDEEAGPWGTRVYPNVNAHNHQHLFSLRIDPRIDGDGNSAAACDAKSSPYPLGSPENMYGNAFYSEKTTFKTVKDSLTNYESATGRSWDIFNPNKVNPYSGKPPSYKLVSTQCPPLLAKEGSLVAKRAPWASHSVNVVPYKDNRLYPSGDHVPQWSGDGVRGMREWIGDGSENIDNTDILFFHTFGITHFPAPEDFPLMPAEPITLMLRPRHFFTENPGLDIQPSYAMTTSEAKRAV 672
                                    27        37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437       447       457       467       477       487       497       507       517       527       537       547       557       567       577       587       597       607       617       627       637       647       657       667     
                                                                                                                                                                                                                                                                                                                                                                                                                             405-TPQ                                                                                                                                                                                                                                                                       


Chain F from PDB  Type:PROTEIN  Length:655
 aligned with AMO_PICAN | P12807 from UniProtKB/Swiss-Prot  Length:692

    Alignment length:655
                                    27        37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437       447       457       467       477       487       497       507       517       527       537       547       557       567       577       587       597       607       617       627       637       647       657       667     
            AMO_PICAN    18 PARPAHPLDPLSTAEIKAATNTVKSYFAGKKISFNTVTLREPARKAYIQWKEQGGPLPPRLAYYVILEAGKPGVKEGLVDLASLSVIETRALETVQPILTVEDLCSTEEVIRNDPAVIEQCVLSGIPANEMHKVYCDPWTIGYDERWGTGKRLQQALVYYRSDEDDSQYSHPLDFCPIVDTEEKKVIFIDIPNRRRKVSKHKHANFYPKHMIEKVGAMRPEAPPINVTQPEGVSFKMTGNVMEWSNFKFHIGFNYREGIVLSDVSYNDHGNVRPIFHRISLSEMIVPYGSPEFPHQRKHALDIGEYGAGYMTNPLSLGCDCKGVIHYLDAHFSDRAGDPITVKNAVCIHEEDDGLLFKHSDFRDNFATSLVTRATKLVVSQIFTAANYEYCLYWVFMQDGAIRLDIRLTGILNTYILGDDEEAGPWGTRVYPNVNAHNHQHLFSLRIDPRIDGDGNSAAACDAKSSPYPLGSPENMYGNAFYSEKTTFKTVKDSLTNYESATGRSWDIFNPNKVNPYSGKPPSYKLVSTQCPPLLAKEGSLVAKRAPWASHSVNVVPYKDNRLYPSGDHVPQWSGDGVRGMREWIGDGSENIDNTDILFFHTFGITHFPAPEDFPLMPAEPITLMLRPRHFFTENPGLDIQPSYAMTTSEAKRAV 672
               SCOP domains d2oovf2 F:18-115 Copper amine oxidase, domains 1 and 2                                            d2oovf3 F:116-236 Copper amine oxidase, domains 1 and 2                                                                  d2oovf1 F:237-672 Copper amine oxidase, domain 3                                                                                                                                                                                                                                                                                                                                                                                                     SCOP domains
               CATH domains 2oovF01 F:18-117  [code=3.10.450.40, no name defined]                                               -----2oovF02 F:123-231  [code=3.10.450.40, no name defined]                                                       2oovF03 F:232-670 Copper amine oxidase, Domain 3                                                                                                                                                                                                                                                                                                                                                                                                       -- CATH domains
           Pfam domains (1) -----Cu_amine_oxidN2-2oovF01 F:23-109                                                       ----Cu_amine_oxidN3-2oovF07 F:114-216                                                                      ------------------------Cu_amine_oxid-2oovF13 F:241-662                                                                                                                                                                                                                                                                                                                                                                                                       ---------- Pfam domains (1)
           Pfam domains (2) -----Cu_amine_oxidN2-2oovF02 F:23-109                                                       ----Cu_amine_oxidN3-2oovF08 F:114-216                                                                      ------------------------Cu_amine_oxid-2oovF14 F:241-662                                                                                                                                                                                                                                                                                                                                                                                                       ---------- Pfam domains (2)
           Pfam domains (3) -----Cu_amine_oxidN2-2oovF03 F:23-109                                                       ----Cu_amine_oxidN3-2oovF09 F:114-216                                                                      ------------------------Cu_amine_oxid-2oovF15 F:241-662                                                                                                                                                                                                                                                                                                                                                                                                       ---------- Pfam domains (3)
           Pfam domains (4) -----Cu_amine_oxidN2-2oovF04 F:23-109                                                       ----Cu_amine_oxidN3-2oovF10 F:114-216                                                                      ------------------------Cu_amine_oxid-2oovF16 F:241-662                                                                                                                                                                                                                                                                                                                                                                                                       ---------- Pfam domains (4)
           Pfam domains (5) -----Cu_amine_oxidN2-2oovF05 F:23-109                                                       ----Cu_amine_oxidN3-2oovF11 F:114-216                                                                      ------------------------Cu_amine_oxid-2oovF17 F:241-662                                                                                                                                                                                                                                                                                                                                                                                                       ---------- Pfam domains (5)
           Pfam domains (6) -----Cu_amine_oxidN2-2oovF06 F:23-109                                                       ----Cu_amine_oxidN3-2oovF12 F:114-216                                                                      ------------------------Cu_amine_oxid-2oovF18 F:241-662                                                                                                                                                                                                                                                                                                                                                                                                       ---------- Pfam domains (6)
         Sec.struct. author ...........hhhhhhhhhhhhhhhh....eeeeeeeee..hhhhhhhhhhh.......eeeeeeee.....eeeeeee....eeeeeeee.......hhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhh.eeeeeee............eeeeeeee......hhhhh....eeeee....eeeeee................hhhhhhhhhh.........eee.......eee..eeee..eeeeeeee...eeeeeeeeeee..eeeeeeeeeeeeeeeee......hhhh.eehhhhhh...................eeeeeeee.....eeeeeeeeeeeeeeeeeeeeee.hhhh...eeeeeeeeeeeeeeeee..eeeeeeeeee....eeeeeeeee....ee..........eeeee..eeee.eeeeeeeeeee.......eeeeeeeee...............eeeeeee..hhhhhh...hhhhh.eeeee.............eeeee............hhhhhhhhhhhh.eeeee.....................hhhhhhhh..........eeeeeeeeeee..hhhhh..eeeeeeeeeeeee..............eeehhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------COPPER_AMINE_O-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------COPPER_AMINE_O---------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2oov F  18 PARPAHPLDPLSTAEIKAATNTVKSYFAGKKISFNTVTLREPARKAYIQWKEQGGPLPPRLAYYVILEAGKPGVKEGLVDLASLSVIETRALETVQPILTVEDLCSTEEVIRNDPAVIEQCVLSGIPANEMHKVYCDPWTIGYDERWGTGKRLQQALVYYRSDEDDSQYSHPLDFCPIVDTEEKKVIFIDIPNRRRKVSKHKHANFYPKHMIEKVGAMRPEAPPINVTQPEGVSFKMTGNVMEWSNFKFHIGFNYREGIVLSDVSYNDHGNVRPIFHRISLSEMIVPYGSPEFPHQRKHALDIGEYGAGYMTNPLSLGCDCKGVIHYLDAHFSDRAGDPITVKNAVCIHEEDDGLLFKHSDFRDNFATSLVTRATKLVVSQIFTAANyEYCLYWVFMQDGAIRLDIRLTGILNTYILGDDEEAGPWGTRVYPNVNAHNHQHLFSLRIDPRIDGDGNSAAACDAKSSPYPLGSPENMYGNAFYSEKTTFKTVKDSLTNYESATGRSWDIFNPNKVNPYSGKPPSYKLVSTQCPPLLAKEGSLVAKRAPWASHSVNVVPYKDNRLYPSGDHVPQWSGDGVRGMREWIGDGSENIDNTDILFFHTFGITHFPAPEDFPLMPAEPITLMLRPRHFFTENPGLDIQPSYAMTTSEAKRAV 672
                                    27        37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437       447       457       467       477       487       497       507       517       527       537       547       557       567       577       587       597       607       617       627       637       647       657       667     
                                                                                                                                                                                                                                                                                                                                                                                                                             405-TPQ
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (2, 18)

Asymmetric Unit
(-)
Class: All beta proteins (24004)
(-)
Class: Alpha and beta proteins (a+b) (23004)

(-) CATH Domains  (2, 18)

Asymmetric Unit
(-)
Class: Alpha Beta (26913)
(-)
Architecture: Roll (3276)
(-)
Topology: Nuclear Transport Factor 2; Chain: A, (517)
(-)
Homologous Superfamily: [code=3.10.450.40, no name defined] (77)
(-)
Pichia angusta. Organism_taxid: 4905. (2)
1a2oovA01A:18-117
1b2oovE01E:18-117
1c2oovF01F:18-117
1d2oovA02A:123-231
1e2oovB02B:123-231
1f2oovC02C:123-231
1g2oovD02D:123-231
1h2oovE02E:123-231
1i2oovF02F:123-231
1j2oovB01B:18-117
1k2oovC01C:18-117
1l2oovD01D:18-117
(-)
Class: Mainly Beta (13760)

(-) Pfam Domains  (3, 18)

Asymmetric Unit
(-)
Clan: CuAO_N2_N3 (40)
(-)
Clan: no clan defined [family: Cu_amine_oxid] (40)

(-) Gene Ontology  (12, 12)

Asymmetric Unit(hide GO term definitions)
Chain A,B,C,D,E,F   (AMO_PICAN | P12807)
molecular function
    GO:0052595    aliphatic-amine oxidase activity    Catalysis of the reaction: an aliphatic amine + H2O + O2 = an aldehyde + NH3 + hydrogen peroxide + H+.
    GO:0052594    aminoacetone:oxygen oxidoreductase(deaminating) activity    Catalysis of the reaction: aminoacetone + H2O + O2 = methylglyoxal + NH3 + hydrogen peroxide + H+.
    GO:0005507    copper ion binding    Interacting selectively and non-covalently with copper (Cu) ions.
    GO:0046872    metal ion binding    Interacting selectively and non-covalently with any metal ion.
    GO:0016491    oxidoreductase activity    Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
    GO:0052596    phenethylamine:oxygen oxidoreductase (deaminating) activity    Catalysis of the reaction: phenylethylamine + O2 + H2O = phenylacetaldehyde + NH3 + hydrogen peroxide + H+.
    GO:0008131    primary amine oxidase activity    Catalysis of the reaction: a primary amine + H2O + O2 = an aldehyde + NH3 + hydrogen peroxide.
    GO:0048038    quinone binding    Interacting selectively and non-covalently with a quinone, any member of a class of diketones derivable from aromatic compounds by conversion of two CH groups into CO groups with any necessary rearrangement of double bonds.
    GO:0052593    tryptamine:oxygen oxidoreductase (deaminating) activity    Catalysis of the reaction: tryptamine + H2O + O2 = NH3 + indole acetaldehyde + hydrogen peroxide + H+.
biological process
    GO:0009308    amine metabolic process    The chemical reactions and pathways involving any organic compound that is weakly basic in character and contains an amino or a substituted amino group. Amines are called primary, secondary, or tertiary according to whether one, two, or three carbon atoms are attached to the nitrogen atom.
    GO:0055114    oxidation-reduction process    A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
cellular component
    GO:0005777    peroxisome    A small organelle enclosed by a single membrane, and found in most eukaryotic cells. Contains peroxidases and other enzymes involved in a variety of metabolic processes including free radical detoxification, lipid catabolism and biosynthesis, and hydrogen peroxide metabolism.

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        AMO_PICAN | P12807: 1a2v 1ekm 2oqe 3n9h 3nbb 3nbj 3sx1 3sxx 3t0u 4ev2 4ev5 4kfd 4kfe 4kff

(-) Related Entries Specified in the PDB File

1a2v PREVIOUS CRYSTALLOGRAPHIC SOLUTION OF HANSENULA POLYMORPHA AMINE OXIDASE
2oqe ISOMORPHOUS OXIDIZED HANSENULA POLYMORPHA IN COMPLEX WITH XE CRYSTAL STRUCTURE FROM SAME STUDY